Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           --------->LBD16                                        --------->HSFB2a(2)                                        --------------->AGL15                                        <---------HSFB2a(2)                                     <-----------GT1                                <---------CCA1(1)                                <---------RVE1(1)                               <---------ARR11(3)                                            <-------                               --------->ARR11(3)                                            --------                             ----------->ARR10                                         <---------ARR11(3)                          --------->ANAC58 --------->ARR14(2)                   <----------DOF2                          <---------ANAC55(2)              ------>MYB46(1)   <---------ARR11(3)                          --------->ANAC58 <---------ARR14(2)                --------->GLK1(2)   ----                          <---------O2 <-----------------AGL1         <-----------GT1  --------->ARR11(3) ->GT1 <---------YAB1----------->HVH21 <---------LBD16     ------>MYB83      --------->ARR11(3)  ----   tgttttagtaagattgaaagtttttgacacgtagatatttttcccgatattgaacaaaacctacatagaaatttacaaaaatctttagagatgttaagta  8200200                                                                           <---------ANAC58                                                                           --------->ANAC55(2)                                                                           --------->ANAC58                                                                           --------->ANAC58                                                                           <---------ANAC46                                                                           --------->ANAC46                                                                           --------->ANAC55(1)                                                                           <---------ANAC55(2)                                                                           <---------ANAC58                                                                         <---------TGA2(2)                                                                       <---------ANAC58                                                               --------->ANAC55(2)                                                      ----------->GT1  <---------ANAC58          <---------AHL20(2)             --------->TOE2(3)     --------->ANAC58          --------->AHL20(2)           --------->GLK1(2)       --------->ANAC46         --------->AHL20(2)            --------->ARR11(3)      <---------ANAC55(2)               ---- --ANAC55(2)                           <---------ARR11(3)      --------->ANAC55(1)              ----- ->ANAC55(2)                          --------->RVE1(1)       <-------TEIL <---------ANAC55(1)  ----- ----->ANAC58                 ----------->GT1     <---------AHL20(2)<---------WOX13(1)       <------- ----->ANAC58            --------->AHL20(2)      <---------YAB1--------->ANAC58        ----------->GT1   agaaatactcatttaattctatactacttaaatagttaaaaaatctaaatttttatttgttaaatacgtaattgcttacgtaagaaaaaatgtaatttcc  8200300                          -------->HAHB4                          --------->YAB1            ------->GAMYB --------->ATHB12           --------->MYB46(3)          --------->RAP2.6(3)                                                    --------->AHL20(2)          <-----------------------TaNAC69(2)                                    <---------AHL20(1)          <---------At5g28300--------->YAB1                                     --------->AHL20(1) --------->AHL20(2)       <---------ICU4                                       --------->AHL20(2) <-- <---------AHL20(2)      <---------YAB1                                      --------->AHL20(2)------ -->ZmHOX2a(1)           --------->ICU4                                    --------->AHL20(2)  <----- ---------->AGL15      <---------ICU4                              --------->AHL20(2)        <------- ---->TOE2(3)       --------->YAB1                  ---------->DOF2<---------AHL20(2)<-----------GT1 ----GT1 --------->MYB52(1) <---------YAB1---------->DOF2   ----------->GT1<---------AHL20(2)--------   ttataaattagtaacggccaaaacataatgattataagttaacaaaaagaaaactaaagagcctgaaaaataaatataaaaatatatatacaatgtagac  8200400                                                         --------->AHL20(2)                                                        --------->AHL20(2)             --------->ATHB12                                                        <---------AHL20(2)             -------->ATHB1                                               ----------->GT1                         --------->YAB1 --------DOF2                              <---------AHL20(2)       ------>MYB46(1)    <---------ICU4 --->ARR11(3)                              <---------AHL20(1)       ------>MYB83      --------->ICU4 ----ARR11(3)                              --------->AHL20(2)     <---------MYB59     <---------ATHB12 --ETT(2)         --------->ZAT6           --------->AHL20(1)  <-----------GT1        <---------YAB1 ->ETT(2)       <-----------GT1           <---------ATHB12   --------->AHL20(2)  --------->ANAC55(2)   cttttatgaacaaatttgtaactctatatttgaaaaactttgcaataaattgttaaatataaattaaacctaatgcatcactcatgtaatcattggcata  8200500                <----------DOF2             <---------AHL20(2)         <---------AHL20(2)                                      -------->HAHB4        <---------ARR11(3)                                       <---------ICU4        <---------AHL20(1)                                       <---------AHL20(2)        --------->ARR11(3)                                      <---------ATHB12       ------->GAMYB        <---------AHL20(2)  --------->DEAR3(1)     --------->WRKY38(1)               ------>MYB83        --------->AHL20(2) <------NtERF2           --------->WRKY12                  ------>MYB46(1)        --------->AHL20(1)--------->MYB52(1)       --------->WRKY45  --------->YAB1  -------->P     --------->AHL20(2)   ------>NtERF2<----------DOF2          <---------ATHB51   --------->AtMYB61     --------->YAB1      --------->DEAR3(1)      <----------DOF2--------->ICU4    --------->MYB46(3)    <---------YAB1      --------->MYB46(3)  <-----------HVH21   <---------YAB1  <-----------GT1   aaaactataatatattttctttgtgagccaccgaagtttagctttctgtcactttgaccctctctaattattcatagttttaaaaccaaccctctctaaa  8200600                   --------->HSFB2a(2)        <---------RVE1(1)       --------->ANAC58                      --------->ARR11(3)       --------->ANAC58                      <---------GLK1(2)     ---------->DOF2                         <---------ARR11(3) <---------ANAC55(2)     --------->YAB1    *TSS <---------AHL20(2)              <---------ARR14(2)   aatacttaaaagcaaactcttccaaaatcaaaacctcttcttacacagattttttttttctctgagagagacagagagagcgaaacttgagagaccaaaa  8200700                                          --------->DAG2                                         ---------->DOF2                                      --------->YAB1                                    ------>MYB46(1)                                    ------>MYB83                                                  <--           --------->MYB46(3)    --------->MYB46(3)  <---------DAG2         <<<<<<<<<TBF1       <----   <---------ICU4<---------GLK1(2) ----------->RAV1(1)      <-----------RAV1(1)          ------->TEIL  <---------ATHB12              >>>>>>>>>MYB2        <----------DOF2  ---------->ID1  --------->AtLEC2   tccaatcttttcaacaatcgattctctctgagaaaaccaacaataaagctagacacttttttttgtgggtttgtcttcttcttcgttcatgcaccatgtt  8200800       <---------DOF5.7(2)     --------->DOF5.7(2)   <---------ANAC58   <---------O2   <---------ANAC58                                                                   <---------ANAC58   <---------ANAC55(1)                                                 <---------ARR11(3)   --------->ANAC55(2)                                                 --------->ARR11(3)   <---------ANAC55(2)          --------->ARR11(3)                  <---------------------WRI1   <---------ANAC46             <---------ARR11(3)        <---------ARR14(2)          <---------ANAC58 -------ZAT6                 <---------ATHB12             --------->GLK1(2)    ---------->DOF2 <----- -----ANAC46          <---------AHL20(2)    <---------MYB46(3)     ---------->DOF2   <-------TEIL----   gtgttacgtgaacgaagaagctatataatcaataaatcttatcgatttgttgagtttgggaatcggagagaaagatgttaacaaaggtgcttagtaagga  8200900                          <---------ZAT14                          --------->ZAT14              <---------ANAC46          <---------ANAC58<---------ZAT18             <---------GLK1(2)   ----------->RAV1(2)          <---------ANAC58--------->ZAT18          --------->AtMYB61    <---------ALFIN1  --------->ANAC58    <---------ARR14(2)         ------>NtERF2          --------->ANAC46  --------->ANAC58    --------->ARR14(2)   <------ZmHOX2a(1)          <---------ALFIN1 -ZmHOX2a(1)  <---------ANAC58           <---------TOE2(3)           <---------REM1(2) ------->GT1  <---------ANAC58           <---------TOE1(3)   --------->LBD16         <-----------GT1   ggttaagccatgccttgcttgtccaatctgcactaatccgtttaaggatgccaccacaatctccgagtgtctccacacctgtaagtgtaacccttcgatt  8201000            <----------DOF2          <---------YAB1                                                      <---------ZAT14         <---------ARR11(3)                                            <---------AHL20(2)        <---------CCA1(2)                                             --------->AHL20(2)      <---------DAG2                                                  <---------AHL20(2)      <----------DOF2                                                <---------AHL20(2)     --------->TOE2(3)                                              --------->YAB1   ---------->ID1           <---------YAB1                    ----------->GT1 --------->ZAT14   <-----------GT1       --------->GLK1(2)                    <---------MYB46(3)                    <  <-----------GT1       <---------GLK1(2)                 --------->ATHB12   <---------ZAT6--------->AHL20(2)   gttttttcctttatctttgtgatttagattctgattttttgtttgtgactatctctctgtttattggttatattaattagtgtagactagagattatatc  8201100  Previous    Next  AGI:  At3g23060.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT1G06770.2); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT1G06770.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22649.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 8200643    to: 8203240    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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