Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                             <------NtERF2                                                                          <---------TOE1(1)                                                                        ------>NtERF2                                                                       --------->DEAR3(1)                                                                      <---------RAP2.6(2)                                                                     <---------At4g35610                                                                     --------->At4g35610                                                                 <----------CDC5                                                ----------->GT1 --------->At4g35610     <---------ANAC58                       <---------TOE2(2)   <------ZmHOX2a(1)    <---------------------WRI1                    --------->TOE1(3)   <------ZmHOX2a(1)     --------->MYB46(3)        <---------ANAC58                    --------->TOE2(3) --------->ALFIN1      <---------ATERF1(1)        <---------At4g35610         --------->HSFB2a(2)         <------ZmHOX2a(1)      --------->MYB52(1)  <-------TEIL -------->YAB1   <-----------GT1  <------ZmHOX2a(1)      --------->HSFB2a(2)   <--------P   tatcaaaacttctaaaattataccttaggtttcataggaggaggaggagatggtgacttcggcaacggctgagcggccgaggtagatggtgctggtgaag  8085200                    --------->LBD16                   --------->LBD16                ------>ZmHOX2a(1)                                                                   <            --------->TCP15(1)                                                                      <            <---------ARR14(2)                                                                      <            --------->ARR14(2)                                 --------->ICU4                       -            <---------PCF2                                   --------->ANAC55(2)                   --          <---------TOE1(2)                              <-----------HVH21  <---------MYB52(1)     <-          <---------MYB46(3)      --------->YAB1  --------->GLK1(1)        <-------GAMYB           <-        <---------LBD16   ----------->GT1         <---------GLK1(1)       <---------MYB46(3)      ---       <---------ANAC58  --------->DAG2         <------ZmHOX2a(1) <---------YAB1           ----------       <---------ANAC58 ---------->DOF2    <-----------HVH21 <---------ANAC55(2)          --------->ALFIN1   agtcttcattcgtgggtcctccctgaaaaagtcaaataatcagacggtcaggatttcatagtcacatgatgaatggccgttgtatcagggaagtggagaa  8085300                                                                  <------NtERF2                                                                 --------->LBD16                                                                <---------ANAC46                                                                <---------DEAR3(1)                                                             --------->ATERF1(2)                                                             <---------ATERF1(2)                                                            --------->DEAR3(2)                                                        --------->HSFB2a(1)     --------->TOE2(3)                                  --------->At4g35610   --------->SPL7                                       <---------At4g35610   ------->TEIL                                         <---------HSFB2a(1) ---------ANAC55(2)                                     <---------HSFC1(2) ---------ANAC58           --------->MYB52(1)           --------->HSFC1(2)             --------->ARR11(3) ---------ANAC58 <---------At4g35610    ------>ZmHOX2a(1)  --------->MYB52(1)   <------MYB46(1)   <-- -------->ANAC55(2)       <---------ALFIN1             --------->ANAC58         <------MYB83 <------- ------------->AtSPL8    --------->MYB46(3)            --------->ANAC58   <---------ANAC58   <------- --------------AtSPL3    <---------MYB55(2)        <---------HSFB2a(2)    <---------ANAC58   <------- --------TOE2(3) --------->At4g35610  <-----------------AG -------->P ---------->DOF2  <---------ARR11(3) ------>MYB52(1)------->TEIL<---------LBD16  <---------TOE2(3) <---------LBD16 <---------AtMYB61  --- ->GT1       --------->AtLEC2 --------->LBD16<---------TOE1(3)--------->LBD16 <--------P ------>ZmHOX2a(2)   taacgtacctcagccatgcatctcactcccaccggataattcctcttgaggttagggaagctaccggcggagaaaagcttgttggtgttgatcttgcgag  8085400                         <---------AtLEC2        --------->DEAR3(2)       --------->MYB52(1)<---------ANAC58     --------->MYB46(3)  <---------ANAC58 -------MYB46(3)      <---------WOX13(1) --ANAC58 --------->LBD16<---------ANAC46            ---------->DOF2 --ANAC46--------->ATERF1(2)             <---------At4g35610 --ANAC58--------->DEAR3(1)              <-------GAMYB -------->GT1       --------->ATHB12    <-----------RAV1(1)            <---------ZAT6   tggttaatccaccggcgaagactgattgcatgttgaacgatgctgttgccatttctaaagcttagaactactagtgtgagagaaattaagaagaaacttg  8085500                                                                                     <---------TOE2(2)                                                                                     ------->TEIL                                                                                  --------->ANAC55(2)                                                                                  <---------ANAC58                                                                                  <---------ANAC46                                                                                  <---------ANAC55(1)                                            <---------ANAC58                      <---------ANAC55(2)                                <----------DOF2                                   <---------ANAC58                    <---------TOE1(3)       ------>ZmHOX2a(2)                    <---------TOE1(2)                    <---------TOE2(2)       <---------ANAC58                --------->ARR11(3)      <                    <---------TOE2(3)     --------->ARR11(3)                <---------ARR11(3)   <---                  <---------MYB52(1)      <---------ARR11(3)               --------->YAB1   <--------            <---------ICU4<---------ANAC55(2)                --------->CCA1(2)=======================           --------->ICU4 --------->ANAC55(2)    --------->REM1(2)  --------->MYB52(1)   ------->TEIL           <---------YAB1 --------->HSFB2a(2)   --------->ALFIN1   *TSS  <---------KAN4(2)<----------  --------->At4g35610     <---------HSFB2a(2) <---------ANAC46 <---------YAB1 ------>ZmHOX2a(2) -----   gagtagctaagtgattatcgcttaggttacagaactttaagctagatcgtgtgtagaagcttgatatgagtaacgaatgatcttacgtatgtatttatag  8085600                          <------MYB83                          <------MYB46(1) ---------MYB46(3)       --------->MYB59                                 <---------DAG2             - ---ZmHOX2a(1)    <------MYB83                    <----------DOF2     <-----------GT1               < -AHL20(2)    --------->ATHB12                <----------DOF2        <-----------GT1         <------- ===HOX2a_HOX2a   <------MYB46(1)        ------>ZmHOX2a(1)     --------->ANAC55(2)        --------->AHL20(2) -TBP         --------->YAB1             --------->LBD16     <---------AHL20(2)         ----------->GT1 ------>HVH21<---------YAB1            <---------ANAC46      <-----------GT1        --------->YAB1  -   gacgggtgatcagaaatgataggtcattaggtcgagttgtttcctgaactttcttttagttatttacttatttagcctttcgatattgataagttaatat  8085700                                    <-------MYC3                     --------->WRKY18(1)                    <-----------HVH21                    --------->At5g28300                   ==========================MYC_MYB                   ------->GAMYB    ------->MYC2                  --------->MYB46(3)<-------MYC2                 ------>MYB83       ------->MYC3                 ------>MYB46(1)   --------->TGA1a              <---------MYB52(2)   --------->ANAC55(2)              --------->MYB46(3)   <---------ANAC55(2)            <-----------GT1        <---------O2                                  <------ZmHOX2a(2)   --------->ANAC46----------->GT1 <---------TGA1a                              <---------ARR14(2) -------->ZAT18 --------->MYB52(1) --------->O2                       <---------TOE2(3) ---------ZAT18==============================MYC_MYB               <---------STY1(2) --YAB1  --------->YAB1            --------->ANAC46          <-------TEIL       --------->ARR14(2) -------->ZAT14------->GAMYB<---------ICU4--------->YAB1     --------->ZAT18   <------ZmHOX2a(1)   agttcacacaaaaataaccaacggtcaaaaacattacacgtgaatcatatagtatttgaaaggttcactatctaggttgaaggatcagcgttcaaatttt  8085800                                                                     --------->YAB1                                                              ------>MYB46(1)                                                              ------>MYB83                                                           --------->ANAC58                                                           --------->ANAC58                                                           --------->ANAC46                                                         --------->ANAC58                             <-----------GT1             --------->ANAC58                       <---------YAB1                    --------->ANAC46                     ----------->GT1                   --------->ANAC46<---------YAB1          <-----                <---------YAB1                --------->AHL20(2)    <---------YAB1         <---------GLK1(2)          <---------YAB1  <---------YAB1      <---------AHL20(2) <-------TEIL           --------->YAB1   cttactacaatttttattctgatttgttattaaactgtttcaactggattaattaacacacaccaaattcattataagtctcacatagtatcatattctt  8085900                                                                        --------->AHL20(2)                                                                ----------->GT1        <-----------GT1                                                    --------->ANAC58    <---------AHL20(2)  <---------YAB1                   <-------TEIL     --------->ANAC58   --------->AHL20(2) -----DOF2            ---------->DOF2             ---------->DOF2   --------->ICU4----------->GT1   <   tattgttatacgagtagtaatcaacaaagtcattaagtacatcacctcgataaaaagccaattctatggaaaaattaatatggacagtttatctacattt  8086000                                       <---------GLK1(1)                                      --------->ARR11(3)                                      <---------ARR14(2)                                      --------->ARR14(2)                                      <---------AGP1                                      <---------ARR11(3)                                     <---------CCA1(2)                              <---------AHL20(2)                                ----------->HVH21                              --------->AHL20(2)                 <---------AHL20(2)                              <---------AHL20(1)                 --------->AHL20(2)                           --------->AHL20(1)                   --------->AHL20(2)                          <---------ICU4------>ZmHOX2a(2)       <---------AHL20(1)        <---------ARR14(2)                          --------->ATHB51     <---------ARR11(3)--------->ATHB51         --------->ARR14(2)                          --------->AHL20(2)   <---------GLK1(2)<---------AHL20(2)   <---------ANAC46                          <---------AHL20(2)   --------->ARR11(3)<---------ICU4<---------WOX13(1) ---------GLK1(2)        --------->ICU4--------->GLK1(1)  --------->AtLEC2   --------->MYB52(1)   <--   catattcttatgaactaaaacatgctaattattttatttggatctccaagatttttggacatccaaattatttctaaactgactgactcgtgtatttggc  8086100  Previous    Next  AGI:  At3g22840.1    Description:  ELIP1 (EARLY LIGHT-INDUCABLE PROTEIN); chlorophyll binding. similar to ELIP2 (EARLY LIGHT-INDUCIBLE PROTEIN 2), chlorophyll binding [Arabidopsis thaliana] (TAIR:AT4G14690.1); similar to ELIP [Brassica rapa subsp. pekinensis] (GB:AAR11456.1); contains domain SSF103511 (SSF103511); contains domain PTHR14154 (PTHR14154); contains domain PTHR14154:SF1 (PTHR14154:SF1) Range:  from: 8084454    to: 8085567    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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