Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     <---------ANAC55(2)             --------->ICU4        <---------ANAC55(2)        --------->ANAC55(2)   <---------------AtSPL8                                                   --------->MYB52(1) -------->ZAT6     --------->ANAC55(2)                                   --------->TOE2(3) --->ANAC55(1)  <---------YAB1        <-----------GT1                    --------->TOE1(3)        <-- --->ANAC55(2)<---------ICU4       <---------ICU4                    <---------AHL20(2)         <---- ----ANAC55(2)--------->YAB1      --------->ICU4                 --------->AHL20(2)            ------ --ALFIN1 <---------AHL20(2)     <---------ARR11(3)              <---------AHL20(2)   <---------ZAT6 ->RAV1(1)--------->AHL20(2) --------->ANAC46            --------->YAB1  --------->YAB1--------->At5g28300   taatactagtacttaattatcatgtattctcacgagataattacatttatcgagcacaaaaataagtttaatttatcttaacgaatcactgttaatacgg  8044100      --------->YAB1      -------->HAHB4      --------->ATHB12     <---------YAB1   --------->YAB1   <---------ICU4                                                                    <----------DOF2  <---------AHL20(2)                                                         <---------AHL20(2)  --------->ICU4                                                            --------->AHL20(1)  <---------ATHB12                                                          <---------AHL20(1)  --------->AHL20(2)                           ----------->GT1              --------->AHL20(2)  <---------ATHB51                       ------->GAMYB                  <------ZmHOX2a(1) -------WRKY12                         <---------At4g35610           --------->CCA1(2)    <---------- -------HVH21           --------->YAB1 --------->At4g35610      ---------->DOF2 <-----------GT1 ----->GT1           --------->YAB1  <---------WRKY38(1)----------->RAV1(1) <---------AHL20(2)   tcaaataattataggtatatcaacaatgacaagtagtagtcaacagagtcagtaaaaaccacagagaaaagataggaatttatttctcttttttgttgtt  8044200                                       ---------->DOF2                                   --------->At4g35610                   --------->AHL20(1)                                   <---------At4g35610           --------->ANAC55(2)      --------->ANAC58                                <---------ZAT14                  <---------ANAC55(2)    ---------->DOF2      --------->AHL20(2)        --------->ZAT14               <---------MYB52(1) <---------AtLEC2    <----------DOF2             <-------TEIL          --------->ATHB12   <---------AHL20(1)   -------   <---------ICU4           --------->DAG2           <---------YAB1      --------->AHL20(2)   -------  <---------YAB1      --------->MYB52(1)--------->DAG2<---------ICU4     <---------AHL20(2)   ------- -RAV1(1)     --------->ANAC46 --------->ALFIN1      --------->ICU4     --------->AHL20(2)--------->ANAC58   catcatctttatatatacaaaacaaaacagaaggtgcagcgaaaaggaactgttgattattgcagttacttaaattttattttgcataaccaaagcaaga  8044300                                        ---------->DOF2                                 <---------DAG2                                 <----------DOF2                       --------->ZAT14                             <---------MYB52(1)                        <---------ZAT14                             <<<<<<<<<MYB98                        <---------------AtSPL8  --------->DAG2       --------->bZIP60(1)                      <---------YAB1               <------- ---------->DOF2       <---------bZIP60(1)--------->ANAC58    --------->AHL20(2)        ----------->GT1 -->ANAC58       <---------TOE2(3)     <---------AHL20(2)     <---------AHL20(2)    ------->GAMYB<--- ---->GT1        <---------TOE1(3)   <---------YAB1      --------->ARR11(3)         ================= -->ANAC58 --------->ICU4   <-------GAMYB --------->ANAC58<---------RVE1(1)      ----------->RAV1(1)   aaaaaaaggagcaaagattaaggtgatgtccgttactttattaaaagcaaaatcgatacgatatttatttttgtacagagagacaacagcgagtgaattg  8044400            --------->ALFIN1          <---------TGA1a          ============================================bZIP_DOF          <---------ANAC55(2)          <---------ANAC46          <---------ANAC58          <---------ANAC58          ============================================bZIP_DOF          <---------ANAC55(1)                                                      <----------DOF2          --------->O2                                                            <---------DAG2          --------->TGA1a                                                        <-----------------AGL1   ---------->DOF2      ----------->GT1                                       --------->ATERF1(1)   =================bZIP_DOF                     ---------->DOF2      --------->ALFIN1<-----------RAV1(1) -----CBF <---------O2  <---------ANAC46--------->TOE2(3)     *TSS    <-----------RAV1(1)        <--- ------GLK1(2) ------->TEIL          ----------->RAV1(1) <----------ID1 --------->ALFIN1        <---- ===================MYC_MYB ----------->TBP---------->DOF2   ---------->DOF2 <-----------HVH21 <-----   attctcaaagagacgtgtacgtagaggtgtatatatagacaacataaaagagaaagagagagacaaagacaagtgttggggtcaccttttgtggtctctg  8044500                             --------->KAN4(2)               --------->ARR11(3)     <------MYB46(1)         <-----------GT1     <------MYB83--------->YAB1 --------->TOE2(3) --------->ARR14(2)       <---------GLK1(2)  <----------DOF2                            <------------ <---------ARR14(2)   --------->ANAC46    --------->ANAC46   ------->TEIL              --------->TOE2(3) ------MYB52(1)--------->ARR14(2)   --------->At4g35610     <---------CCA1(2) <----------DOF2   <---- ---GAMYB      <---------ARR11(3)   <---------At4g35610 --------------------->WRI1  <----------DOF2 ------RAV1(1) <---------ARR14(2)------>ZmHOX2a(1)      <----------DOF2 <---------MYB52(1)---------->DOF2   ttggatttggtttggactatcttcacgagattatcctcatcttcccgcttcttctctcctttgaatctttcttcgttgttctttcactttcttaaagagg  8044600                               <-------TEIL                              --------->CCA1(2)                             --------->ARR14(2)                --------->MYB111(1)        ----------->GT1   --------->SPL7                --------->MYB111(2)    ---------->DOF2   ------>ZmHOX2a(2)                --------->MYB46(2)  --------->LBD16     <------ZmHOX2a(2) ---AGL15       <---------MYB46(3)<---------LBD16      <---------ARR14(2)                    <------- --ZmHOX2a(1)  <--------P    <---------ARR14(2)        --------->ARR14(2)      ---------->DOF2   atgtgagattgtttttggtagttagaaaatggatacaccggaaaagagtgaaacccagatcggtactccagtttctaaactcaaagtcgaggttttttat  8044700                                                                                          --------->ATHB12                 <-------TEIL                                                      <----------DOF2        --------->TOE2(3)                                            XXXXXXXXXXXXXXXXXXXX>MIR858   <-  <---------ARR11(3)                                       <---------ANAC46<---------MYB46(3)    ---- <---------CCA1(2)     <----------DOF2                  ----------->HVH21  <---------DEAR3(2)    <--- --AHL20(2)---------->DOF2                    ------>ZmHOX2a(1) <----------DOF2    <---------DAG2<---   tctatatctatctcaaagtttcatgctttattagttttctcgttgttcctctgtttctgtgatgggttttttggtgtctgttcgacttttcttcattgaa  8044800        <---------ANAC46 <---------TOE1(2) --------->SPL7 --------SPL7---------->DOF2                  ---------->DOF2       <---------MYB46(3) ----------->AtSPL3              ---------->ID1                     --------->ATHB12           <----- ------------AtSPL3            <-----------RAV1(1)          <---------AHL20(2)                 <----- ------------AtSPL8    ---------->ID1        <---------WRKY45      <---------MYB52(1)          <-----   tcgtacggttttgtgtaaagcccttgtcttaatttgttgcattttagtcaaagtttcagtttttaatcggttattggaatgaattgtgttgaaagttatg  8044900                                                        >>>>>>>>>>>>>>>>>LFY                                                       <XXXXXXXXXXXXXXXXXXXXMIR849       <---------WOX13(1)                              <-----------GT1     --------->ATHB12                               --------->ARR14(2)                         ------    <---------YAB1                                  <---------ARR14(2)                        <------    --------->ICU4         ---------->DOF2         <------ZmHOX2a(1)                        <-------- ----YAB1                =================================HOX2a_HOX2a  <---------ANAC55(2)  --------- ----TOE1(3)             <------ZmHOX2a(2)<---------ZAT14             <-------TEIL         <---------ATHB12 ----TOE2(3)     --------->GLK1(2)        --------->ZAT18         ----------->GT1        --------->WOX13(1)   gttttgatgattggagaagaatttgagatcaaagtgtttttttgtgcaatgcaggattcaccagtgtttagttacatatgcaatctctcaccaattaaga  8045000  Previous    Next  AGI:  At3g22760.1    Description:  SOL1 (TSO1-Like); transcription factor. similar to tesmin/TSO1-like CXC domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G14770.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71212.1); contains InterPro domain Tesmin/TSO1-like, CXC (InterPro:IPR005172) Range:  from: 8044462    to: 8047537    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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