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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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---------ATHB12                 <----------DOF2
>At4g35610                 ---------->DOF2
-At4g35610         --------->AHL20(2)     --------->DAG2    --------->ZAT6
>ZAT2          <---------AHL20(2)        ---------->DOF2  <-----------GT1
-ZAT2          --------->AHL20(2)    <---------TOE2(3) --------->TOE2(3)
 
caatcgctcttcacatatataaataaaaacaaaagcttttaagaaaaagtgtttgatttcttaacaatacaaatggaaaacacaaaaaacataccaatat  7935400
                                                                                                 ---
                                                                                                 <--
              ---------->DOF2                         <---------ARR11(3)            ------->GAMYB<--
            --------->ANAC46                    <-----------GT1                    <---------ALFIN1
            --------->ANAC58              <---------DAG2                  --------->GLK1(2)      ---
            --------->ANAC58              <----------DOF2   <----------DOF2       <---------REM1(2)
      ---------->ID1                 <---------At4g35610<-----------GT1  <---------GLK1(2)   <------
 
cgaaattttgtctccaagaaagacatgaactgagttgtttcgctgcttttttcacattatctcctttcaccttcaagaatctctcaacacactctctgtt  7935500
                                                                       --------->AtLEC2
         ------>ZmHOX2a(1)                                            <-------MYC2
         ----------->GT1                                      ----------->GT1--------->CCA1(2)
<---------ARR14(2)                                            --------->ANAC58
--------->ARR14(2)                                            --------->ANAC58 <---------YAB1
------>HSFB2a(2)                                <----------DOF2       <-------MYC3        ------->TEIL
-------ANAC55(2)                 --------->AtLEC2           ---------->DOF2 <---------ARR14(2)
-------HSFB2a(2)             <---------YAB1   --------->HSFC1(2)      ------->MYC3    --------------
------>ANAC55(2)  <---------TOE2(3) ---------->DOF2      <---------TOE2(3)  --------->ARR14(2)     -
-----HVH21      ---------->DOF2--------->YAB1 <---------HSFC1(2)      ------->MYC2    --------------
 
acagaacttctcctgtaaaaaaaggttttgttattcatgaaaagttcgaagcttttgtttatggaaagtaacacatgcagatatgagtagacgtacttgt  7935600
                                                                                   ------>ZmHOX2a(2)
                                                                                  <------ZmHOX2a(2)
                                                                                  --------->GLK1(1)
                                                                                  <---------GLK1(1)
                                                                                 <---------ARR11(3)
                                                                                 --------->ARR11(3)
                                                                                 --------->ARR14(2)
                           ------>MYB46(1)                                       <---------AGP1
       --------->ALFIN1    ------>MYB83                                          <---------ARR14(2)
->AtSPL3              <---------WRKY18(1)     <----------DOF2                    <---------ARR14(3)
--------->DOF2     <---------ANAC58   --------->ZAT2   <----------DOF2           --------->ARR14(3)
->AtSPL8           <---------ANAC58   --------->At4g35610           <---------AHL20(2)   <---------CCA1(2)
 
ttaaaagtgagtggagattgtttcttgaccaagcgaagaacagcttcgactttctcatctttcttccccatttttttttatgaagatctcttaaatctct  7935700
                                                                                            --------
                                                                                            --------
                                                                                            <-------
                                                                                            --------
                                                                                            <-------
                                                                                           ---------
                                                                                           <--------
                                                                                        ------------
                                                                                      ----------->RAV1(1)
                                                                                     ----------->HVH21
                                                                                     <---------ETT(1)
                                                                                  --------->TOE1(2)
                                                                                 --------->At4g35610
                                                                                 --------->ZAT2
                                                                                 <---------At4g35610
                                                                                 <---------HSFB2a(1)
                                           ----------->GT1                       <---------ZAT2
                                           <----------ID1                        <---------HSFC1(2)
                                          ----------->GT1                        --------->HSFC1(2)
          --------->YAB1                ---------->DOF2--------->ATHB12         --------->GLK1(2)
  <---------AtMYB61         <------ZmHOX2a(1)       ---------->DOF2        ---------->DOF2 <--------
 
ctgttttggtttataagaacgaagaaacagaggatgatgaagagaaaggaaaaaaaaaagattggatgttttgggagagaaagaagctgcgacaatgatt  7935800
   <---------ANAC58
   <---------ANAC55(1)
   <---------ANAC46
   --------->ANAC55(2)                      <----------DOF2
   <---------ANAC58                        ------>ZmHOX2a(2)
>ATHB1                                    <------ZmHOX2a(2)
->YAB1                                   --------->AGP1                            <---------ANAC46
--ICU4                  <---------------AGL15    ------->TEIL                 <---------MYB46(3)
->ATHB12                --------------->AGL15   <---------CCA1(2)           <-------GAMYB
-ATHB1             <---------ZAT2        <---------ARR11(3)                <-----------RAV1(1)
>ICU4          ------>NtERF2             --------->ARR11(3)            <---------ANAC58
-YAB1          --------->LBD16          <---------GLK1(1)              --------->ALFIN1
>ATHB5        <---------ANAC46     ---------->DOF2      <----------DOF2<---------ANAC58
-ATHB12       *TSS <---------At4g35610  --------->GLK1(1)            --------->ALFIN1         <-----
 
gtatttgcgtgtttgtgccgcgagcttcttcttgtagcaaaagagatctttgtatctctctttctctagagagtgtgtgtgttgttgtgtcttacatatg  7935900
                                                                                                 ---
                                                                                                ----
                                                                                                ----
                                                                                                <---
                                                                                                ----
                                                                                                ----
                                                                                                <---
                                                                                                ----
                                                                                             -------
                                                                                             -------
                                                                                         <------NtERF2
                                                                                        <---------RAP2.6(3)
                                <---------bZIP60(2)                                     <------NtERF2
                                <---------ANAC46                                       <---------ATERF1(2)
                              <---------TGA2(2)                                        --------->RAP2.6(2)
                             ----------->TGA1                                          --------->ANAC46
                             ----------->HVH21                                         --------->ATERF1(2)
                          <---------MYB46(3)           --------->TOE1(3)               --------->DEAR3(1)
                       <------MYB83                    --------->TOE2(3)              <---------RAP2.6(2)
                       <------MYB46(1)                ----------->GT1                 --------->RAP2.3(1)
                      --------->MYB55(2)             ------->TEIL                     --------->ATERF1(1)
                      <---------MYB46(3)          <---------ANAC58                   <---------ATERF1(1)
                     <---------ANAC46      <---------ANAC46                      <-----------RAV1(1)
                     <---------ANAC58      <---------ANAC58              ---------->DOF2------>NtERF2
                --------->MYB52(2)         <---------ANAC58   ----------->GT1   <---------MYB52(1)
     <---------ZAT14 <---------ANAC58     ---------->ID1--------->DOF5.7(2)    <---------RAP2.6(3)
------RAV1(1)  --------->ATHB12----------->STF1   <---------ANAC58 ---------->DOF2 <---------RAP2.6(2)
 
ttggagactggagagacgttattggctggtggatgacgttgttatgtcgttttgcgaacgttaaatgtttaaaagctaaagccgttgtggccgccagtga  7936000
           <---------MYB52(1)
    --------->MYB52(1)
   ----------->HVH21
  <---------MYB52(2)
--->NtERF2--------->At5g28300
----->ANAC46
----->ANAC58
------bZIP60(1)
----->bZIP60(1)                                                                           <---------ICU4
----->TGA2(1)                                                                             --------->YAB1
------TGA2(1)                                                                            <---------ATHB12
----->ANAC58                 <---------ANAC46              <---------AHL20(2)       --------->ANAC55(2)
---->HVH21<-------GAMYB  --------------------->WRI1        --------->AHL20(2)       <---------ANAC55(2)
---->TGA1----------->GT1 <----------DOF2                 --------->TOE2(3)        <-----------GT1
 
cgccatctaacgccgttaaatggctctgctttgtgtgaaccaaaaaaaaaacttgtgtttcattaattagtcaaatgtttgtttattacttaatcatgtg  7936100
                   ---------->DOF2
              <---------------AGL15                 <---------YAB1
              <---------DAG2                      --------->YAB1
              --------------->AGL15              <---------YAB1
              <----------DOF2                 --------->ICU4
      ------>ZmHOX2a(1)                  <---------ANAC55(2)                --------->AHL20(2)
     --------->TOE1(3)                   <---------HSFB2a(2)               --------->AHL20(2)
     --------->TOE2(3)                   --------->ANAC55(2)               --------->YAB1         <-
  <---------ARR11(3)                     --------->HSFB2a(2)           <---------YAB1          <----
  --------->ARR11(3)    <----------DOF2  ----------->GT1             ----------->GT1           <----
 
tttaatatccttaagtactttataaagcttttgctaagtgagttctgtaactatgatacttgaacttgtagattgtaataaaaatagaataaatgttttt  7936200
                                                                          --------->WRKY12
                                                                          --------->WRKY38(1)
                                                                       <---------TGA1a
                                                                       <---------ANAC58
                                                                       --------->O2
                                                                       <---------O2
                                                                       <---------bZIP60(2)
                                                                       <---------ANAC46
                                                                       <---------ANAC58
                                                                       =============================bZIP_DOF
                                                                    ----------->TGA1
                                                                    ----------->HVH21
                                                              <---------ETT(2)
                                    <-----------GT1           --------->ETT(2)     <---------AHL20(2)
                         <---------DOF5.7(2)                 <------ZmHOX2a(2)    --------->AHL20(2)
                        <---------WRKY38(1)                ------->GAMYB <---------MYB52(1)
--------YAB1            <---------WRKY12                   ======================MYC_MYB <----------DOF2
-----AHL20(2)           <---------WRKY45 ------>MYB46(1)  --------->MYB46(3)      <---------AHL20(2)
-----YAB1              <<<<<<<<<WRKY6    ------>MYB83     <---------MYB52(2)   --------->WOX13(1)
 
tattagtaacacctagttcatatatagtcaacgtctatataacctagctcaagtacttccaacgatcgacagtgacgttggccaattaaatgcttttgca  7936300
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AGI:  At3g22410.1   
Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G05370.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71162.1); contains InterPro domain Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251); contains InterPro domain Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074)
Range:  from: 7933174    to: 7935815    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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