Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      <---------AHL20(1)                                                    --------->AHL20(1)                                                    <---------AHL20(2)                                                    --------->AHL20(2)        ----------->GT1              <---------AHL20(2)     --------->MYB52(1)             --------->AHL20(1)                                              <     ------>MYB83                   <---------AHL20(2)                                            ---     ------>MYB46(1)                --------->AHL20(2)                                           <---   --------->AtMYB61                <---------AHL20(1)                                    --------->ARR11(3)   <---------MYB59                 --------->YAB1  --------->AHL20(2)                     <---------ARR11(3) ----->ANAC58          --------->MYB46(3)--------->YAB1             --------->GLK1(2)  --------->AHL20(2) ----->ANAC58         --------->ANAC46  <---------YAB1     --------------------->WRI1  <---------AHL20(2)   cgaaaccaaaccgaaaaactgaacacccagcccttaaatataatgaaaatcgaataaatttgtttgaaagaatcgaacaaaattgacaataaaatctaat  7906400                                                                                                -----                                                                                      --------->ANAC58                                                                                      --------->ANAC46                                                                          <---------ICU4        <----                                                                          -------->HAHB4        <----                                                                         --------->ICU4        ------                                                                    <---------ANAC55(2)      --------                                                                    --------->ANAC55(2)    <---------YAB1         <---------ANAC46                                           ----------->GT1   --------->ANAC58 ------ZmHOX2a(1)                                            --------->AtMYB61    <---------ALFIN1 ------>MYB59                                   --------->YAB1      --------->ANAC46--------->ANAC46 ------ICU4      <---------ICU4     <---------GLK1(2)     --------->ANAC46--------->YAB1  <---------ARR11(3)   taggactattttcgtctaattttgacttagttgaaacagaatattagcaaaaatactaaaacaccacaacgcgtaataatacccacacacgatatcatta  7906500                                       --------->ARR11(3)                                       --------->ARR14(2)                                       <---------ARR11(3)                --------->DEAR3(1)         --------->YAB1                <---------ARR14(2)               <---------LBD16  >>>>>>>>>>WRKY43                  --------->ANAC58                  <---------ALFIN1  >>>>>>>>>>WRKY38                  --------->ANAC58             <-----------ARR10  >>>>>>>>>>WRKY26              --------->AtLEC2                 <---------ARR11(3) ---->AHL20(2)                  --------->ANAC58                 --------->GLK1(2) -----AHL20(1)                  --------->ANAC58                 --------->ARR11(3) -----AHL20(2)             ------>NtERF2                   --------->ANAC58 --->AHL20(2)--------->GLK1(2)  --------->ANAC46           --------->ANAC46    --------->AHL20(2) ->TOE2(3)  <---------GLK1(2) <---------ALFIN1             --------->ANAC58  <----------DOF2   aatttgaccaataagaatctagctcttggcgaccacgcaagtatcttccatcttgctctccaagaaaaatctacaccggctttaaatttacataaacacc  7906600                                                                                                    <                                                                                 ------------>MYB.PH3(1)                                                                                 ====================                                                                         --------->ANAC58           -                                                                         --------->ANAC58           <                                                                         --------->ANAC46           -              ----------->GT1                                          --------->AtMYB61    <--------          --------->DAG2                                               ----------->RAV1(1)  =========         ---------->DOF2                                            --------->ANAC46     <-----------GT1    ---------->DOF2                                                 <-----------GT1 ----------->GT1 <   <---------WRKY38(1)          --------->YAB1              ------>ZmHOX2a(1)--------->ANAC58       -   <---------WRKY12 --------->YAB1          ----------->GT1--------->TOE2(3) --------->ANAC58       -   ctcagtcaaagaaaagtcgtaaacatagtctctctcatgaccacaagggtaacacagtcatcctaaatataaaccacacaagaaaactgttatactttat  7906700   <-----------HVH21 -------->ABF1 ------->MYC3 ------->MYC2 ------->MYC4 <-------MYC3 <-------MYC2 <-------MYC4 ---------TGA1a =========MYC_MYB                                                                                 *TSS -------->TGA1a                                                                           ----------- ---------ANAC55(2)                                                                      <----------- -------->ANAC46                                   --------->MYB52(2)                 <---------ANAC46 --DOF2                                          <---------MYB52(1)                   <---------ANAC58 =========bZIP_DOF                         --------->MYB46(3)              <---------ANAC58    <----- ---------O2                           <------ZmHOX2a(2)            <-----------GT1   <---------ANAC58 -------->ANAC55(2)        --------->REM1(2)  --------->MYB46(3)----------->TBP    --------->TOE1(2)- -------->O2            <---------ANAC46--------->YAB1     <-----------GT1 <---------ANAC58    ------   acacgtgtcatagtctcattacatctacgtgaagagtttcgatcatcaaccgttcgttttcttactatataaaccttgctcgagacctgcgtgtgaagcg  7906800     <----------ID1                                                                               --- >HVH21  ---------->DOF2                                                       <-----------GT1   <--- ----------WRI1                                                            <---------DAG2      <----- ----ANAC46                                       ------>ZmHOX2a(1)        <----------DOF2     ------ --------->DOF2                        ------>ZmHOX2a(1)                <-----------GT1       <------ ----->GT1                 ---------->DOF2       --------->TOE2(3)<---------TOE2(3)           -------   tataaagacgacaaagtaaaccaaaaaaaaaaagagttctcctacaattttcctaaattcttggatttgagatttcactttttccgatttgaaacaatga  7906900                                            <-------GAMYB                                            <------NtERF2                                            <---------At4g35610                                            <---------ZAT2                                            --------->At4g35610                                            --------->ZAT2                                            --------->ATERF1(1)                                            ----------->RAV1(2)                                           ------>NtERF2                                           <---------MYB46(3)                                           <---------RRTF1(1)                                           <---------RAP2.3(1)            --------->SPL1(2)                                           <---------ERF1--------->MYB52(2)   <---------ARR14(2)                                          <---------ANAC58                --------->SPL7<---------O2                                  <-----------HVH21      <---------MYB46(3)   --------->ARR14(2)                       <------NtERF2      <---------DEAR3(1)             --------->SPL1(1)                       --------->RAP2.3(1)<---------ATERF1(2)            <---------SPL1(1)                      <---------ATERF1(1) <---------RRTF1(2)            <---------SPL1(2)                      ------>NtERF2<---------MYB52(1) ------->MYC3      <---------SPL7  --------->TGA1a                      <---------DEAR4(2)  <---------RAP2.3(3)          <---------ANAC58 --------->O2                      <---------ERF1 --------->MYB52(2)<---------MYB52(1)<---------MYB52(1)                      <---------ORA47(2)  <---------RAP2.6(2)          <---------ANAC58 <---------TGA1a       <---------DEAR3(1)  <---------ARR14(2)         <-------MYC3    <---------------AtSPL3      <---------LBD16 <---------RAP2.3(1) <---------RAP2.3(2)         --------------->AtSPL3 ------>YAB1         <---------DEAR3(1)   --------->ATERF1(2)        <------------------SPL14 ------YAB1          <---------RAP2.3(2)  <---------ANAC58          ------------------>SPL14  <------ ----ICU4            <---------RAP2.6(2)  <---------ANAC46     --------->ETT(2)         ============= --->YAB1            <---------RAP2.3(3) --------->RAP2.6(3)  --------->HSFB2a(2)<---------ANAC58 ---ATHB12 --------->ABI4(2)     <----------DOF2   <---------ALFIN1<---------DEAR3(2)----------->HVH21 -->ICU4  --------->ALFIN1 --------->ARR14(2)   <---------PCF5<---------HSFB2a(2)<---------ANAC58   -   tgataactcgcggtggagccaaggcggcgaaatcgctgttagtggcggctggaccacgtttgttctcgacggtccgtacggtttcgtctcacgaggcttt  7907000      ----------------->AGL3                             ------>NtERF2       <-------TEIL<------ZmHOX2a(2)    --------->ANAC58                     --------->CCA1(2)                  --------->ARR14(1)    --------->ANAC58                    --------->ARR14(2)                 <---------ARR14(2)    --------->ANAC46               <---------AtLEC2     --------->DEAR3(1) --------->ARR11(1) --------->At4g35610               <---------ANAC46     ----------->HVH21  <---------GLK1(2) ----DOF2                      <---------At4g35610  <---------At4g35610    --------->ARR14(2) ====bZIP_DOF                --------->REM1(1)      <---------GLK1(1)--------->CCA1(2)   ============ -------->ANAC46        <---------ZAT6  <---------ARR14(2)  --------->ATHB12--------->CCA1(2)   atcagcaagccatattttgaagcctggtgttacatctgcttggatatggactagagctccgacgattggaggtatgagattcgctagcacgatcactctg  7907100                                                                            <---------------------WRI1                                                                            <------NtERF2                                                                          --------->DEAR3(1)                                                                         <------NtERF2                                                                         --------->ATERF1(1)                                                                         --------->RAP2.3(1)                                                                        --------->ABI4(1)                                                                        ------>NtERF2                                                                        <---------ATERF1(1)                                                                       --------->RAP2.3(3)                                                                       --------->RAP2.3(2)                                                                       <---------ATERF1(2)                                                                      --------->ORA47(2)                                                                      --------->ERF1                                                                      --------->RAP2.3(1)                                                                      <------NtERF2                                                                      --------->ATERF1(1)                                                                      --------->RRTF1(1)                                                                      --------->RAP2.6(1)                                                                      --------->DEAR4(2)                                                                     <---------ATERF1(1)                                                                     <---------RAP2.3(1)                                                                     ------>NtERF2                                                                     <---------DEAR4(2)                                                                    --------->ANAC46                                                                    --------->DEAR3(1)                                                                    --------->ANAC58                                                                    <---------DEAR3(1)                                                                    --------->ANAC58--------->YAB1                                 --------->YAB1                    --------->ATERF1(1)                        <------ZmHOX2a(1)                     --------->ALFIN1----------->GT1                     <------ZmHOX2a(1)                   --------->MYB52(1)--------->LBD16                   --------->ALFIN1                  <---------ARR14(2)<---------DEAR3(1)         <--                  <------ZmHOX2a(1)--------->At4g35610 --------->MYB46(3)<---------LBD16         ----           --------->At4g35610 --------->GLK1(2)     --------->ARR14(2)--------->DEAR3(1)       ----- ========================HOX2a_HOX2a                 ------->TEIL <---------ATERF1(1)          ------   ggagagaaaactccgatgaaggaggaggacgcgaatcagaagaaaacagagaacgaatccaccggtggagacgccgccggaggtaataacaagggagata  7907200                                                                                   <---------ANAC55(2)                                                                                   --------->ANAC58                                                                                   --------->ANAC55(2)                                                                                   --------->ANAC58                                                                                  --------->SPL7                             ------>MYB46(1)                                    <---------SPL7    <--                             ------>MYB83                                     --------------->AtSPL8                         ------->TEIL                                         <---------------AtSPL8 --------->ARR14(2) <-------GAMYB                                             <---------------AtSPL3 <---------GLK1(2) --------->ALFIN1                              --------->ALFIN1 <-------TEIL   <--- -------TOE2(3)  <---------ANAC58        ---------->DOF2 <---------AtLEC2   <-----------RAV1(2)<----- ----->DAG2      <---------ANAC58<---------YAB1        <---------YAB1       <---------LBD16    ------ ----->DOF2<----------DOF2 <---------MYB59        <---------HSFC1(2)--------->ARR14(2)         <----- --->CCA1(2)     <---------ANAC46<---------TOE2(3)--------->HSFC1(2)<---------ARR14(2)       --------   aaggaatcgcgagctattggggtgttgaacctaataagattactaaagaagatggttctgaatggaagtggaactgtttcagggtacgttatagctagat  7907300  Previous    Next  AGI:  At3g22370.1    Description:  AOX1A (alternative oxidase 1A); alternative oxidase. Identical to Alternative oxidase 1a, mitochondrial precursor (AOX1A) [Arabidopsis Thaliana] (GB:Q39219;GB:O23914;GB:P93734); similar to AOX1B (alternative oxidase 1B), alternative oxidase [Arabidopsis thaliana] (TAIR:AT3G22360.1); similar to alternative oxidase [Populus tremula x Populus tremuloides] (GB:CAB64356.1); contains InterPro domain Alternative oxidase; (InterPro:IPR002680) Range:  from: 7906798    to: 7908747    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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