Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            <---------MYB52(1)                         <-------GAMYB                        <---------MYB46(3)                        <---------ANAC46                                        <---------TOE2(3)             --------->ANAC58                                                   <---------YAB1             --------->ANAC58----------->GT1           <----------DOF2<---------YAB1  --------->YAB1    <-------MYC3           ---------->DOF2     <---------ARR11(3)                ---- <---------ATHB12   ------->MYC3      --------->AHL20(2)       --------->AHL20(1) <-------GAMYB  ---- ------->WOX13(1)<---------DOF5.7(2)  <---------AHL20(2)       <---------AHL20(1)<---------MYB46(3) -   gcaatcacatggaccaagtaaacgtgtcgttgagttatatataaataaagtctatgtcttttcaatatttttaaaattgattttggttgagtttggaaca  7873800                               ---------->DOF2                             <---------YAB1         ------>ZmHOX2a(2)                           --------->YAB1          <---------At4g35610                          <------ZmHOX2a(2)        --------->At4g35610 --------->DAG2          <---------ARR11(3)       --------->ARR14(2)   <----------DOF2 ----->ANAC58            --------->ARR11(3)       <---------ARR14(2)   <---------DAG2 ----->ANAC58      --------->TOE1(3)  --------->ATHB12      --------->DAG2 --------->DOF2    --------->TOE2(3)--------->GLK1(2)      ---------->DOF2    <----------DOF2   agtaaagtaatgggtcttaaacctcaagatcataaaagaatcagtgggatgggatcggacataaagcatcacacttttttctttgactcatataagcata  7873900                                                                                       <---------ANAC58                                                                                       <---------ANAC58                                                                                <---------AHL20(2)                                                                               --------->AHL20(2)                                                                               <---------AHL20(2)                                                                              --------->YAB1                                                                           <---------AHL20(2)                                                                          <---------AHL20(2)                                                                          --------->AHL20(1)   ------                                                                          <---------AHL20(1)   <-----                                                                          --------->AHL20(2)   <-----                                                                      --------->AHL20(2)       ------                             <---------YAB1                         --------->TOE2(3)  <---------ANAC46                 <---------At4g35610                 <---------HSFB2a(2) <---------AHL20(2) ---------    <---------CCA1(2)<---------ARR14(2)              --------->HSFB2a(2) --------->AHL20(2)<---------YAB1   tgatgcatatcatttaggcagtggatttagtatgaaaaaatcaaaaactatattttcagaacaaaatttacataaattaattttaatttgcttataatta  7874000                                                                        <---------------AGL15                                                                       <-----------------AG                                                 --------->ZAT6        <-----------------AGL1                                          --------->ATHB12      --------->YAB1                                         --------->ICU4        <---------YAB1                                         <---------ATHB12    --------->YAB1  ----------->GT1                        <---------YAB1     <---------YAB1 --->AHL20(1)                           <---------TOE2(3)--------->AHL20(2)          --------->AHL20(2) ----AHL20(1)                         --------->AHL20(2) --------->AHL20(1)     <------ZmHOX2a(1) ----AHL20(2)                         <---------AHL20(2) <---------AHL20(2)    ----------->GT1 --->AHL20(2)       ---------->DOF2  <---------ATHB12   --------->AHL20(2)     <----------ID1      -- >YAB1   --------->AHL20(1)        --------->WOX13(1)   <---------AHL20(2)    ----------->GT1     ---   attgtagtaaatatgttacacttaaagttttttgaaccaattaatgatttaagactaattttattatcatactaacaaaataggaaaaaaaatcaaaaaa  7874100                                         --------->ANAC55(2)                                         <---------ANAC55(2)                                         --------->O2                                         <---------O2                                         <---------TGA1a                                     <-----------HVH21                                    <---------At4g35610                                   --------->MYB59              --------->ANAC58                                  <-----------RAV1(2)     --------->ANAC46                        <--            <---------AHL20(2)  <-----------HVH21         --------->ANAC58                       <---           <---------YAB1     --------->DAG2              --------->ANAC58                       <--- ------->DAG2               ---------->DOF2         *TSS--------->ANAC46              --------->MYB52(1) ------->DOF2               =======================bZIP_DOF     --------->ANAC58      ---------->DOF2   aaaagtttggatttttatttgggtttgggcaaaaggtcaggtcatgtgtcgatgttacacacggccaaggaaacagaacaagaacaaataaaggccattg  7874200                                                                                              <------                                                                                              <------                                                      <------NtERF2                   <---------DAG2<   <<<<<<<<<TBF1                                     --------->LBD16                  <----------DOF2 --------DOF2                                       <---------ANAC46         ------>ZmHOX2a(1)<------ ------ANAC58          --------->ATHB12            <---------LBD16       <-----------GT1  <---------ANAC58 ------ANAC58          <---------ICU4     <----------DOF2             <---------GLK1(1)   <---------ANAC58   ctttcttcttcccttccccttctcttcattgcccttctctctctcttttttatcgcggagagagttttatagatttctccttcttcaactttacttgcgt  7874300                                                        <---------ZAT2                                                        --------->ZAT2                                                       ------>MYB83                                                       ------>MYB46(1)                                                      <---------ALFIN1                            ---                                                      --------->ANAC46                            <--                                                     <---------MYB59                              ---        <-----------GT1                       <-----------GT1                                   <---- ---ANAC58                            <---------At4g35610                                    <------- ---ANAC58                            --------->At4g35610           ---------->ID1           -------- ----------DOF2                       <---------ZAT2 --------->MYB46(3)          ------>ZmHOX2a(1)--- ---ANAC46                   --------->At4g35610   -------->P     <-----------RAV1(1) ---------->DOF2   ttctttgttttatcaattcgaaaaccctagcagcaatctctgctgatttcacttacccacctcgaattttgttgttctatctccttcacaaagcaccacc  7874400                                                                                             ------>ZmHOX2a(2)                                                                                            <------ZmHOX2a(2)                                                                                            ---------                                                                                            <--------                                                                                           <---------AGP1                                                                                           --------->ARR11(3)         --------->STY1(1)                                                                 <---------ARR11(3) --->MYB46(1)                                                                              <---------ARR14(2) -------ARR14(2)                                                       <---------MYB52(1)  --------->ARR14(2) ------>ARR14(2)     --------->ARR14(2)                              <---------ANAC46      --------->AGP1 -----MYB111(2)      <---------GLK1(2)                               <---------ANAC58     --------->GLK1(1) --ALFIN1<---------STY1(1)                                           <---------ANAC58     <---------GLK1(1) ->DEAR3(1)          <---------ARR14(2)     <---------MYB52(1)---------->DOF2            ----------->ARR10 --->MYB83          <------ZmHOX2a(1)------>ZmHOX2a(1)    --------->ZAT6         <------ZmHOX2a(2)   tatctgaaaccctaggggaagaggattctctcttatgtcctcttctgttatcttctcttacctctaaagtttcgtttatttcgatcatggagagatctga  7874500                                                                 <----------DOF2                  <--                                                            <---------HSFC1(2)             <---------ANAC46                                                            --------->HSFC1(2)    --------->ARR11(3)                                                --------------->AGL15           <---------YAB1    <--                                                =====================================================                                  ------>ZmHOX2a(1)      <------ZmHOX2a(1)    --------->YAB1     <--- >CCA1(2)       <----------DOF2   <---------MYB52(1)   <---------TOE2(3)   <----------DOF2<---------At4g35610 -At4g35610  <-----------GT1     --------->TOE2(3)   ---------->DOF2 <----------DOF2   <---------At4g35610   ttcaagggatttgtataactttgttcgcgcttcttccttaggtcagtcttcttcttaaaggatgtttctttctttctcttttatgattttgctgcttata  7874600              <---------MYB52(1)         --------->ARR14(1)        --------->ARR14(2)   <------MYB46(1)        <---------GLK1(2)    <------MYB83                                       --------->ZAT18        <---------ARR14(2)<---------ANAC58                                     <-----------HVH21 ---------------AGL3      <---------ANAC46                                   --------->MYB59 ---------------AGL2      <---------ANAC58                                   <---------TOE2(3) ===============MADS_MADS--------->ATHB12        <-----------RAV1(1)    --------->ATHB12            - ------At4g35610 <---------ANAC46               <---------TOE2(3)      <---------YAB1               <   gctgattttggattcggttttgtgtattgcttggtttgtttaagcacataaatgttggagatttatgctatgtatgatttaggtcactgagctatatagc  7874700  Previous    Next  AGI:  At3g22270.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G14990.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43108.1); contains domain TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1 (PTHR21551) Range:  from: 7874152    to: 7878475    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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