Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         --------->YAB1                                                           <---------ICU4            --------->AHL20(2)                        <---------YAB1                     <--------HAHB4      --------->YAB1                  --------->AHL20(2)            --------->AHL20(2)             <---------ICU4                  <---------AHL20(2)         --------->ATHB12               --------->YAB1              <---------AHL20(2)             ----------->GT1          ------->GAMYB  <---------AHL20(2)     <----------DOF2  <---------AHL20(2)    --------->ICU4 --------->YAB1   <---------ICU4--------->AHL20(2) ------------->AtSPL8<---------AHL20(2)     <---------YAB1--------->ICU4   <---------ATHB12   ------- -----GLK1(1)<---------AHL20(2) <-----------RAV1(1)       <---------ATHB12 --------->ICU4 --------->YAB1   ttctgttctttattttttatttttttatttttgtatgttgtttaagatgattaaaaactaatcatttttcaacagcaataatcatgttttaataaaaaat  7789000                    <-------MYC2                    ------->MYC3                    ------->MYC2                    <-------MYC3                   <---------ANAC58                   <---------ANAC46                   <---------ANAC55(2)                     ----------->RAV1(1)                   <---------TGA1a                       <---------ZAT14                   --------->TGA1a                    --------->At4g35610                   --------->O2                     -------->ZAP1                   <---------O2                    <---------At5g28300               <-----------HVH21                  <-----------GT1     --------->ATHB12 --------->REM1(2)          --------->WRKY38(1)    <---------YAB1 --------->ANAC55(2)           ----------->HVH21                <----------DOF2  <----------DOF2  <---------ANAC58              --------->WRKY12            <-----------GT1  ===========================bZIP_DOF  --------->YAB1 <---------At4g35610   --------->ZAT14  --------------->AGL15    --------->YAB1    --------->ATHB12          ---------->DOF2 -->AHL20(2)  --------->YAB1  <---------ICU4<-------TEIL --------->ZAT14<---------TOE2(3)   ataactttgattagaagcatcacgtgtaaacataatttctatcaaattcatttgaccgctgcaccattcgtactaaagtttactctttggctcatgagtt  7789100                                                         ---------->DOF2                                                        --------->AHL20(2)                                               <---------YAB1                 --------->DAG2             <---------YAB1                ---------->DOF2  --------->AHL20(2)     <---------AHL20(2)            --------->AHL20(2)   <---------AHL20(2) --------->AHL20(2)           <---------AHL20(2)  --------->CCA1(2)    <---------AHL20(2)           --------->AHL20(2) --------->ARR11(3)   --------->AHL20(2)      ---------->DOF2  ---------         --------->YAB1       <---------ARR11(3)--------->YAB1         --------->TOE2(3)    <--------     --------->TOE2(3)--------->ATHB12      --------->ICU4   ----------->GT1      --------->REM1(1) -   aaactaatctaaaataaataaagttgattagagatataaatacaacatgattataaaattaaagggaatatagcctaaaaagcttcaccatttgagctta  7789200                               <---------ICU4                              <---------AHL20(2)                              --------->AHL20(2)                             <---------WOX13(1)                           ----------->GT1                           --------->ATHB12    <---------At4g35610                           <------ZmHOX2a(1)                           -------->HAHB4      --------->At4g35610                         <---------TOE2(3)                          --------->ICU4       --------->ZAT2                          --------->YAB1              --------------->AGL15   --------->ATHB12                                <---------YAB1         <----------DOF2  <---------ATHB12     <---------ZAT2                        --------->AHL20(1)         <---------DAG2<---------AHL20(2)      ----------->RAV1(2)                   <---------AHL20(2)      <-----------GT1 --------->AHL20(2)     <-----------RAV1(2)                     --------->AHL20(2) >At4g35610   --------->HSFB2a(2)    <---------YAB1        ----------->GT1          --------->YAB1 -At4g35610   <---------HSFB2a(2) <-----------GT1        --------->DAG2        <-----------GT1 <----- -------->AHL20(2)    <---------AHL20(2)<---------WOX13(1)----------->GT1    <----------DOF2---------   aactaaataaactttaccagaaaaataaatgattaattactgattgatcagctgatcaaaaggttaaaaaaaaaaaaaactttacattataataaggaat  7789300                                        <---------AHL20(2)                         --------->YAB1--------->AHL20(1)                        <---------AHL20(2)                    <----------DOF2    <---------AHL20(1)                 <---------ARR11(3)    --------->AHL20(2)                <---------CCA1(2)      <---------AHL20(2)              ------>ZmHOX2a(1)   --------->AHL20(2)              <----------DOF2     --------->AHL20(1)          --------->ARR11(3)      <---------AHL20(2)          <---------ARR11(3) --------->AHL20(2)         --------->CCA1(1)  --------->YAB1                    <-----------HVH21     --------->AHL20(2)--------->AHL20(2) <------------CBF <---------GLK1(2) ----KAN4(2) --------->TOE2(3) --------->YAB1   <---------AHL20(2) -->GT1  --------->RVE1(1)  --------->AHL20(2)  --------->AHL20(2)                 *TSS<---------CCA1(2)   aaacaaaaaaaatatcctttatctttttaataaaaataaaataaaattgttttattagcaagaatgtcagagaataggtctcagttctcatctctctctc  7789400                                                      <------------------------ANAC81                                             <---------MYB46(3)                                             <-----------RAV1(1)                                       --------->ANAC46 <----------DOF2                               <---------AtLEC2    <----------DOF2                               <---------ANAC46   <---------ANAC58                          <---------MYB46(3) --------->MYB52(2)                          ----------------------->TaNAC69(2)          <----------DOF2                         <---------ANAC46  <----------DOF2<---------AtMYB61    <-----------GT1              <---------ZAT14  <---------ANAC58   <---------ANAC58   --------------->AGL15              --------->ZAT14  <---------ANAC58---------->ID1    <----------DOF2           <---------        --------->YAB1--------->ALFIN1 --------->ANAC58<---------ANAC58    <---------AHL20(2)       - ------>ZmHOX2a(1)    <---------AtMYB61--------->ANAC58<---------ANAC58   <---------AHL20(2)       <-   ttcctctctataacagtgaacagagtggtgtttgcttggacacgcctttgttgctttgctttggtctctttccttttttatttactctcaaaactttcat  7789500                                       --------->ZAT6                                       <---------ALFIN1                                       --------->AtMYB61                                      --------->MYB46(3)                                    --------->DEAR3(1)             <---------WOX13(1)                                    --------->AtMYB61     <---------ANAC58                                    <---------ALFIN1      <---------ANAC58                                   --------->MYB46(3)  <---------PCF2                                   <---------MYB55(2) <---------ANAC58             --------->YAB1   <---------MYB52(1)             ------>MYB83        <---------ANAC58   ----------->HVH21 -DOF2      <---------YAB1        ------>MYB46(1)    <---------MYB46(3)>>>>>>>>>>WRKY18 --------->ID1  <---------ATHB12 --------->ANAC46   <---------ANAC46   <---------ANAC58 ----------GT1--------->WOX13(1)--------->MYB46(3)<-----------RAV1(1)  <---------ANAC58   ttttcgttttgtttatcaatgaacaaaatacaaacccaccaccactactaatttgtgggtgcttctctaattgacttgacagacatcataagagaagact  7789600                                       <---------ANAC58                            ---------->DOF2               --------->YAB1      <---------ANAC58            --------->WOX13(1)     <---------ANAC58   ---------->ID1      --------->At4g35610 --------->MYB46(3)      <----------DOF2     <---------ARR14(2)  ------>MYB83  <---------ANAC58                --------->At4g35610     --------->ARR14(2)  ------>MYB46(1)         <XXXXXXXXXXXXXXXXXXXXMIR157A-C                  <---     --------->GLK1(2)  ----------->RAV1(1)     <XXXXXXXXXXXXXXXXXXXMIR157D       <---------ALFIN1    <---------GLK1(2) --------->MYB46(3)   <----------DOF2 <----------DOF2        --------->ANAC46 <-   tatatagaatctgacaatcacaaaaccaacaaaagtttcttgcttctttgctctttgtcttctttctcttctcagcataaatccacacctctctctctac  7789700                                                --------->ANAC58                             ========================================================================                <---------ALFIN1   <---------LBD16               --------->ANAC46<----------DOF2  --------->ANAC58          <----------DOF2    --------------->AGL15    ---------->DOF2 ------ZAT6  <-----------GT1 <---------------AGL15---------->DOF2  --------->GLK1(2) --------MYB52(1)       <----------DOF2     --------->GLK1(2)     <---------GLK1(2)                 <   tgttactcacctctttcaccacatttcttttctcttttgggggaagaatcaagaaagaaagagagctagaatctagttctatccaagagtgttttttagt  7789800                                                                                     ---------->DOF2                                                                                  ----------->GT1                                                                                 --------->DAG2                                                                                 <---------TOE2(3)                                                                                 <---------TOE1(3)                        <---------ANAC58                                   <---------------AGL15                --------->CCA1(2)                                          --------------->AGL15               --------->ARR14(2)     ------>ZmHOX2a(2)                   <-----------------AGL1       <----------DOF2  <---------ANAC58                                  <-----------------AG       <---------DAG2  --------->HSFC1(2)                                 <-----------------AGL2      --------------->AGL15 ---------->ID1                             <----------DOF2      =====================================================================================MADS_MADS    ---------->ID1     <---------HSFC1(2)                           <---------ARR11(3) =====================MADS_MADS     <---------ARR11(3)              --------->ARR11(3) ----------DOF2<---------ARR14(2)   --------->ARR11(3)   <---------------AtSPL8  --------->MYB59 ----   ttctttctcctttttgggatatggaagcttgttgctctgatcttgaagtagacatcaatggagaacaaactatctttctcaataaggtaaagtctaaatt  7789900  Previous    Next  AGI:  At3g22104.1    Description:  phototropic-responsive NPH3 protein-related. similar to phototropic-responsive NPH3 family protein [Arabidopsis thaliana] (TAIR:AT3G19850.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24190.1); contains InterPro domain NPH3; (InterPro:IPR004249); contains InterPro domain BTB/POZ fold; (InterPro:IPR011333); contains InterPro domain BTB/POZ-like; (InterPro:IPR000210) Range:  from: 7789383    to: 7792387    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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