Home
Tools
- Search
- Colocalization
- Gene Analysis
- Gene Identification
- Small RNA Targets
- MicroRNA Targets
Description
Documentation
Citations
Downloads
Publications
History
Contact
Links
Disclaimer
For complete usage of AthaMap please enable JavaScript in the settings of your browser!
Search
Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
<-----------
ARR10
--------->
GLK1(2)
<---------
GLK1(2)
-------->
P
------>
MYB83
------>
MYB46(1)
<-------
TEIL
--------->
AtMYB61
<-----------
RAV1(1)
--------->
YAB1
--------->
TOE2(3)
<---------
AtLEC2
tgttggaagaatgttggataccaacaagaatctcatctttcaaaatgagttcatcttcgtcaaactctgaatttgcataaacac
ctaaacatttggaaga
7691100
<-----------
ARR10
<---------
GLK1(2)
--------->
ARR11(3)
<---------
MYB46(3)
--------->
MYB46(3)
--------->
GLK1(2)
<---------
ARR11(3)
<---------
ATHB12
--------->
TOE2(3)
<---------
TOE2(3)
<---------
TOE2(3)
<----------
DOF2
<
<-----------
GT1
--------->
AHL20(2)
---------->
DOF2
<---------
DAG2
<--
aatcaaatttgaataaactacattagaaccactgagaaatttaagaatctaaacaaaaactaaagtaagaacttaaac
cttttccaatggttccattgtt
7691200
<---------
At4g35610
--------->
ZAT2
<---------
ZAT2
-----------
GT1
------>
ZmHOX2a(1)
--------->
GLK1(2)
---------
GT1
------->
TEIL
----------->
RAV1(2)
<---------
GLK1(2)
tttcacttcaattccattgcatcttctactagttataagcttgttgaaatactc
ctgaagaagacacaaattgagaaaccagaatcgagctcagtcacta
7691300
<---------
ARR14(2)
--------->
REM1(2)
--------->
ALFIN1
<---------
ANAC58
--------->
At4g35610
<---------
ANAC58
<-------
GAMYB
<---------
ANAC46
<---------
LBD16
<
<-------
TEIL
--------->
ALFIN1
<
--------->
TOE1(2)
--------->
ALFIN1
<-
--------->
TOE2(2)
----------->
RAV1(2)
<---------
At4g35610
--------->
TOE2(3)
<-----------
GT1
--------->
ALFIN1
------
taacattctatggagattagcctcaaacatgcgtatagagagagagagagagggagagggattttac
ctgaagttggggagttggaagcggagcaagaag
7691400
<---------
ANAC58
--------->
DEAR3(1)
<---------
ANAC46
--------->
ATERF1(1)
<------
NtERF2
<---------
DEAR4(2)
<---------
ERF1
<---------
RRTF1(1)
<---------
ATERF1(1)
<---------
RAP2.3(1)
------>
NtERF2
<---------
RAP2.6(1)
<---------
ORA47(2)
<---------
RAP2.3(2)
<---------
RRTF1(2)
<---------
DEAR3(1)
<---------
RRTF1(3)
------>
NtERF2
<---------
RAP2.3(3)
<------
NtERF2
--------->
DEAR3(1)
------>
NtERF2
--------->
ATERF1(1)
--------->
LBD16
<---------
ABI4(1)
<---------
DEAR3(1)
<---------
RAP2.3(1)
--------->
LBD16
<---------
ATERF1(1)
<---------
LBD16
<---------
SPL7
--------->
ANAC46
--------->
TOE1(1)
<---------
LBD16
--------->
TOE2(1)
----------->
ARR10
--------->
HSFB2a(2)
<------
NtERF2
<---------
HSFB2a(2)
----------->
RAV1(1)
--------->
ANAC58
<------------------
SPL14
------>
NtERF2
--------->
ANAC58
<---------
ARR14(2)
----------->
HVH21
--------->
ANAC46
--------->
ARR14(2)
<------
NtERF2
--------->
DEAR3(1)
--------->
MYB52(1)
--------->
ARR11(3)
--------->
ABI4(2)
<--
<------
NtERF2
<---------
MYB46(3)
<---------
GLK1(2)
<---------
ANAC58
<-------
--------->
RAP2.3(1)
<---------
DEAR3(2)
<---------
ARR11(3)
------>
NtERF2
<-------
---------
RAP2.3(1)
<---------
DEAR3(1)
----------->
ARR10
<---------
DEAR3(2)
<------
MYB46(1)
---------
ATERF1(1)
<---------
TOE2(2)
<------
NtERF2
--------->
SPL7
<------
MYB83
--------
DEAR3(1)
<---------
TOE1(2)
--------->
LBD16
<---------
DEAR3(1)
<---------
AHL20(2)
---->
DOF2
--------->
At4g35610
<---------
MYB52(1)
<---------
LBD16
--------->
SPL1(1)
--------->
AHL20(2)
agcggcgacatccgcggcgaagttttcgtcggttttgtaaacggaatccat
agccggagattttctcgtacggcggcgcgtctgtgtttttaatttggtg
7691500
<-------
TEIL
===================
HOX2a_HOX2a
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
--------->
LBD16
====================
HOX2a_HOX2a
--------->
HSFB2a(2)
--------->
ARR14(2)
<---------
SPL7
<---------
ARR14(2)
<-----------
GT1
<------
ZmHOX2a(1)
--------->
LBD16
<---------
YAB1
<---------
HSFB2a(2)
<---------
LBD16
-----
--------
DOF2
<---------
ANAC58
<---------
ARR14(2)
--------->
ZAT2
------>
ZmHOX2a(1)
--
ANAC58
<---------
ANAC58
--------->
ARR14(2)
<---------
ZAT2
------------>
CBF
-
--
ANAC58
*
TSS
<---------
LBD16
<----------
DOF2
----------->
HVH21
--------->
ANAC46
-----
ctattttgact
gtttgggtccggaaggaccagatagactctttggagttgagatggatgacccgagccggatccatacccgtcctcaatttctaaaccaa
7691600
--
----------->
GT1
--------->
YAB1
<------
<---------
ZAT6
<---------
ZAT14
--------->
TOE2(3)
----------->
GT1
<--
->
MYB83
<----------
DOF2
<----------
DOF2
------>
ZmHOX2a(2)
<---------
AHL20(2)
-------
---------->
GT1
--------->
ZAT14
<---------
WOX13(1)
<----------
DOF2
--------->
AHL20(2)
->
MYB46(1)
<----------
DOF2
<---------
YAB1
<---------
DAG2
<---------
AHL20(2)
attagtgaaactttgtctttgtgaagtgattttaggcattagaactatttgtaattgatccataatatccaactttttatttgaattgaaattaaactat
7691700
<---------
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
--------->
MYB59
--------->
AHL20(2)
<---------
AHL20(2)
--------->
YAB1
<---------
AHL20(2)
<---------
ICU4
<---------
YAB1
<---------
TOE2(3)
--------->
ICU4
--------->
AHL20(2)
------
-------->
DOF2
<---------
TOE2(3)
--------->
AHL20(2)
<---------
AHL20(2)
<------
---------
AGL15
<------
MYB83
<------
ZmHOX2a(1)
--------->
AHL20(2)
--------->
AHL20(2)
--------
-------
AHL20(2)
--------->
YAB1
--------->
AHL20(2)
<----------
DOF2
<---------
ANAC55(2)
-------->
AGL15
<------
MYB46(1)
----------->
GT1
<---------
AHL20(2)
<---------
AHL20(2)
----------->
GT1
<
taaaagttatcaaaattaggttatagtaaggaaacgtataaataatttttaattaaatctctttaatttaaatatttcgactgaattatgtaaaatttaa
7691800
-------->
P
<---------
AHL20(2)
------>
MYB46(1)
------>
MYB83
<---------
MYB111(1)
----------->
GT1
--------->
TOE1(2)
---------->
DOF2
--------->
AHL20(2)
<---------
MYB59
--------->
YAB1
--->
AHL20(2)
--------->
YAB1
--------->
AHL20(2)
------->
TEIL
---
AHL20(2)
--------->
ANAC58
--------->
AHL20(2)
<---------
AHL20(2)
->
AHL20(2)
<---------
ZAT6
--------->
ANAC58
<---------
AHL20(2)
--------->
YAB1
--
-------
TEIL
--------->
TOE2(3)
--------->
MYB55(1)
--------->
AHL20(2)
<-----------
RAV1(1)
aatacattatatagggttaacttaaacaagcataacctaccaaaaatttaatcaaagttcaaaacaattatatgaatcaagaagtatgttgttgacacaa
7691900
<----------
DOF2
------>
ZmHOX2a(1)
--------->
ARR14(2)
<---------
ARR14(2)
<---------
YAB1
--------->
GLK1(2)
<---------
YAB1
--------->
YAB1
--------->
ARR11(3)
<---------
YAB1
--------->
ICU4
<---------
ICU4
<---------
ARR11(3)
--------->
YAB1
--------->
AHL20(1)
-------->
HAHB4
<---------
AHL20(1)
--------->
ICU4
<------
ZmHOX2a(1)
<---------
ATHB51
----------->
GT1
<---------
AHL20(1)
<------
ZmHOX2a(1)
--------->
AHL20(2)
---------->
DOF2
--------->
ARR11(3)
<---------
AHL20(2)
--------->
AHL20(1)
--------->
CCA1(2)
-------->
DOF2
----------->
GT1
<---------
AHL20(2)
<---------
ANAC55(2)
<----------
DOF2
aaaaagaaattgaggacaggaaaatattattagaaaactgagtaattaattatgagaatccttttacgaataagtaagataaaagacatgcctttcttag
7692000
Previous
Next
AGI:
At3g21820.1
Description:
ATXR2 (HISTONE-LYSINE N-METHYLTRANSFERASE ATXR2); zinc ion binding. Identical to Histone-lysine N-methyltransferase ATXR2 (ATXR2) [Arabidopsis Thaliana] (GB:Q5PP37;GB:Q9LSY2); similar to SDG37 (SET DOMAIN GROUP 37), zinc ion binding [Arabidopsis thaliana] (TAIR:AT2G17900.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24162.1); contains InterPro domain Zinc finger, MYND-type; (InterPro:IPR002893); contains InterPro domain SET; (InterPro:IPR001214)
Range:
from: 7688441
to: 7691511
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
printer-friendly version