Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            <-----------ARR10                          --------->GLK1(2)                         <---------GLK1(2)                    -------->P                    ------>MYB83                    ------>MYB46(1)            <-------TEIL                      --------->AtMYB61        <-----------RAV1(1)          --------->YAB1    --------->TOE2(3)<---------AtLEC2   tgttggaagaatgttggataccaacaagaatctcatctttcaaaatgagttcatcttcgtcaaactctgaatttgcataaacacctaaacatttggaaga  7691100                                           <-----------ARR10                                          <---------GLK1(2)       --------->ARR11(3) <---------MYB46(3)                         --------->MYB46(3)--------->GLK1(2)      <---------ARR11(3)<---------ATHB12                  --------->TOE2(3)     <---------TOE2(3)  <---------TOE2(3)<----------DOF2         <            <-----------GT1          --------->AHL20(2)   ---------->DOF2  <---------DAG2         <--   aatcaaatttgaataaactacattagaaccactgagaaatttaagaatctaaacaaaaactaaagtaagaacttaaaccttttccaatggttccattgtt  7691200                                                                                     <---------At4g35610                                                                                     --------->ZAT2                                                                                     <---------ZAT2 -----------GT1                                     ------>ZmHOX2a(1)           --------->GLK1(2) ---------GT1    ------->TEIL                     ----------->RAV1(2)          <---------GLK1(2)   tttcacttcaattccattgcatcttctactagttataagcttgttgaaatactcctgaagaagacacaaattgagaaaccagaatcgagctcagtcacta  7691300                               <---------ARR14(2)                               --------->REM1(2)                                     --------->ALFIN1                            <---------ANAC58                                        --------->At4g35610                            <---------ANAC58                                 <-------GAMYB                            <---------ANAC46                            <---------LBD16             <                           <-------TEIL                                --------->ALFIN1             <                         --------->TOE1(2)                            --------->ALFIN1             <-                         --------->TOE2(2)                     ----------->RAV1(2)  <---------At4g35610                  --------->TOE2(3)                          <-----------GT1--------->ALFIN1   ------   taacattctatggagattagcctcaaacatgcgtatagagagagagagagagggagagggattttacctgaagttggggagttggaagcggagcaagaag  7691400                                                                         <---------ANAC58                                                                         --------->DEAR3(1)                                                                         <---------ANAC46                                                                        --------->ATERF1(1)                                                                        <------NtERF2                                                                       <---------DEAR4(2)                                                                       <---------ERF1                                                                       <---------RRTF1(1)                                                                       <---------ATERF1(1)                                                                       <---------RAP2.3(1)                                                                       ------>NtERF2                                                                       <---------RAP2.6(1)                                                                       <---------ORA47(2)                                                                      <---------RAP2.3(2)                                                                      <---------RRTF1(2)                                                                      <---------DEAR3(1)                                                                      <---------RRTF1(3)             ------>NtERF2                                            <---------RAP2.3(3)             <------NtERF2                                            --------->DEAR3(1)            ------>NtERF2                                            --------->ATERF1(1)            --------->LBD16                                          <---------ABI4(1)           <---------DEAR3(1)                                       <---------RAP2.3(1)          --------->LBD16                                           <---------ATERF1(1)          <---------LBD16                                       <---------SPL7         --------->ANAC46                                      --------->TOE1(1)        <---------LBD16                                        --------->TOE2(1)    ----------->ARR10                                         --------->HSFB2a(2)    <------NtERF2                                             <---------HSFB2a(2)   ----------->RAV1(1)                --------->ANAC58       <------------------SPL14   ------>NtERF2                      --------->ANAC58  <---------ARR14(2)  ----------->HVH21                   --------->ANAC46  --------->ARR14(2) <------NtERF2  --------->DEAR3(1)                --------->MYB52(1)  --------->ARR11(3)--------->ABI4(2)       <-- <------NtERF2             <---------MYB46(3)           <---------GLK1(2)<---------ANAC58    <------- --------->RAP2.3(1)       <---------DEAR3(2)           <---------ARR11(3)------>NtERF2      <------- ---------RAP2.3(1)       <---------DEAR3(1)          ----------->ARR10<---------DEAR3(2)    <------MYB46(1) ---------ATERF1(1)       <---------TOE2(2)          <------NtERF2--------->SPL7             <------MYB83 --------DEAR3(1)         <---------TOE1(2)         --------->LBD16<---------DEAR3(1)  <---------AHL20(2) ---->DOF2--------->At4g35610<---------MYB52(1)   <---------LBD16--------->SPL1(1)     --------->AHL20(2)   agcggcgacatccgcggcgaagttttcgtcggttttgtaaacggaatccatagccggagattttctcgtacggcggcgcgtctgtgtttttaatttggtg  7691500                                                                     <-------TEIL                                                                     ===================HOX2a_HOX2a                                                                     ------>ZmHOX2a(2)                                                                    <------ZmHOX2a(2)                  --------->LBD16                                   ====================HOX2a_HOX2a                 --------->HSFB2a(2)                               --------->ARR14(2)              <---------SPL7                                       <---------ARR14(2)    <-----------GT1    <------ZmHOX2a(1)                         --------->LBD16   <---------YAB1<---------HSFB2a(2)                           <---------LBD16                  ----- --------DOF2<---------ANAC58<---------ARR14(2)               --------->ZAT2     ------>ZmHOX2a(1) --ANAC58    <---------ANAC58--------->ARR14(2)               <---------ZAT2     ------------>CBF   - --ANAC58  *TSS <---------LBD16      <----------DOF2  ----------->HVH21     --------->ANAC46    -----   ctattttgactgtttgggtccggaaggaccagatagactctttggagttgagatggatgacccgagccggatccatacccgtcctcaatttctaaaccaa  7691600                                                                                                   --                     ----------->GT1                        --------->YAB1                    <------  <---------ZAT6   <---------ZAT14                       --------->TOE2(3)         ----------->GT1<-- ->MYB83<----------DOF2   <----------DOF2               ------>ZmHOX2a(2) <---------AHL20(2)  ------- ---------->GT1    --------->ZAT14                 <---------WOX13(1) <----------DOF2    --------->AHL20(2) ->MYB46(1)   <----------DOF2                   <---------YAB1        <---------DAG2     <---------AHL20(2)   attagtgaaactttgtctttgtgaagtgattttaggcattagaactatttgtaattgatccataatatccaactttttatttgaattgaaattaaactat  7691700                                                   <---------AHL20(2)                                                  <---------AHL20(2)                                                  --------->AHL20(2)              --------->MYB59           --------->AHL20(2)           <---------AHL20(2)       --------->YAB1                  <---------AHL20(2)            <---------ICU4      <---------YAB1     <---------TOE2(3)--------->ICU4    --------->AHL20(2)                 ------ -------->DOF2<---------TOE2(3)        --------->AHL20(2)   <---------AHL20(2)                <------ ---------AGL15<------MYB83<------ZmHOX2a(1)  --------->AHL20(2) --------->AHL20(2)          -------- -------AHL20(2)     --------->YAB1--------->AHL20(2)     <----------DOF2            <---------ANAC55(2) -------->AGL15<------MYB46(1) ----------->GT1<---------AHL20(2) <---------AHL20(2)  ----------->GT1<   taaaagttatcaaaattaggttatagtaaggaaacgtataaataatttttaattaaatctctttaatttaaatatttcgactgaattatgtaaaatttaa  7691800                                   -------->P<---------AHL20(2)                                   ------>MYB46(1)                                   ------>MYB83                                 <---------MYB111(1)           ----------->GT1       --------->TOE1(2)---------->DOF2    --------->AHL20(2)           <---------MYB59 --------->YAB1 --->AHL20(2)              --------->YAB1    --------->AHL20(2)         ------->TEIL ---AHL20(2)             --------->ANAC58   --------->AHL20(2)   <---------AHL20(2) ->AHL20(2)<---------ZAT6--------->ANAC58   <---------AHL20(2)   --------->YAB1                    -- -------TEIL     --------->TOE2(3)--------->MYB55(1)             --------->AHL20(2)<-----------RAV1(1)   aatacattatatagggttaacttaaacaagcataacctaccaaaaatttaatcaaagttcaaaacaattatatgaatcaagaagtatgttgttgacacaa  7691900                                                          <----------DOF2                                                          ------>ZmHOX2a(1)                                                      --------->ARR14(2)                                                      <---------ARR14(2)                          <---------YAB1              --------->GLK1(2)                       <---------YAB1             --------->YAB1                    --------->ARR11(3)           <---------YAB1                    --------->ICU4             <---------ICU4                    <---------ARR11(3)         --------->YAB1                    --------->AHL20(1)         -------->HAHB4                    <---------AHL20(1)        --------->ICU4                <------ZmHOX2a(1)             <---------ATHB51               ----------->GT1             <---------AHL20(1)           <------ZmHOX2a(1)               --------->AHL20(2)                 ---------->DOF2   --------->ARR11(3)  <---------AHL20(2)  --------->AHL20(1)               --------->CCA1(2) -------->DOF2----------->GT1              <---------AHL20(2)        <---------ANAC55(2) <----------DOF2   aaaaagaaattgaggacaggaaaatattattagaaaactgagtaattaattatgagaatccttttacgaataagtaagataaaagacatgcctttcttag  7692000  Previous    Next  AGI:  At3g21820.1    Description:  ATXR2 (HISTONE-LYSINE N-METHYLTRANSFERASE ATXR2); zinc ion binding. Identical to Histone-lysine N-methyltransferase ATXR2 (ATXR2) [Arabidopsis Thaliana] (GB:Q5PP37;GB:Q9LSY2); similar to SDG37 (SET DOMAIN GROUP 37), zinc ion binding [Arabidopsis thaliana] (TAIR:AT2G17900.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24162.1); contains InterPro domain Zinc finger, MYND-type; (InterPro:IPR002893); contains InterPro domain SET; (InterPro:IPR001214) Range:  from: 7688441    to: 7691511    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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