Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            --------->TOE2(3)                                --------->ZAT6          --------->YAB1            <-----------GT1  --------->ZAT18 ------>ZmHOX2a(1)          <----------DOF2          --------->At4g35610 ----->ARR14(2)       --------->At4g35610        ------->TEIL                ------->TEIL ------ARR14(2)       <---------At4g35610     <---------ATHB12           <-------MYC3 -DOF2 <---------CCA1(2)   <---------DAG2     <---------YAB1             ------->MYC3       <--------   ttcctgtctctatcttaatttgtctgcaaccttttctattaccatctaatgaatgtgctcaacactataaatccatgtgtatgtttcttcatttttgtgg  7280500                             --------->AtMYB61                          --------->ANAC46                                                 <---------ANAC58         --------------->AGL15 --------->ANAC58                                            <---------ANAC58         <---------------AGL15 --------->ANAC58                  ----------->GT1          <---------TOE1(2)   --------->ATHB51   <-----------GT1                           <-------MYC3             <-----------GT1   --------->ATHB12<---------ICU4                               ------->MYC3           <---------ANAC58  <---------YAB1----------->GT1--------->ANAC46         ------->GAMYB ---------->DOF2  <---------ANAC58  <---------AHL20(2) <---------YAB1  --------->YAB1    --------->MYB46(3)            <---------ARR11(3) ---RAV1(1)--------->REM1(1)--------->MYB46(3)         <---------MYB52(2)     <-----------GT1   ccatattattgctacaactagttattacaaaccacacaatcacatgttactcaaacaacaaacccacatgttaaaagttattaccaatttcttacgttct  7280600                            ------->TEIL                 <---------ARR11(3)                                            <---------ICU4                 --------->ARR11(3)                                           <---------YAB1                --------->CCA1(1)                                           --------->YAB1                --------->RVE1(1)                                      <---------WOX13(1)                <---------GLK1(1)                                    --------->ATHB12                <---------RVE1(1)                                 <---------ANAC58    --------->ANAC58                <---------CCA1(1)                      <---------TOE2(3)   <---------ATHB12       <--                --------->GLK1(1)           --------->WRKY38(1)   <---------ANAC58    --------->ANAC58               <---------ARR11(3)        <---------MYB46(3)     --------->ARR11(3)    --------->ANAC46               --------->ARR11(3)     <---------MYB46(3)<---------REM1(1)--------->WOX13(1)   -------             <---------TOE2(3)        <-----------RAV1(1)    <---------GLK1(2)--------->ICU4  -------   cgtttttttgtgtttaagatatctaacatgaatttgacatttgttgttgactaatttgatgtagaatttcttgattaatcaagattacacgaacacaagc  7280700                                                   <---------AHL20(2)                                                 <---------YAB1                                                <---------AHL20(2)  --------->ATHB12                            <---------YAB1   --------->ANAC55(2)  <---------ICU4                            --------->YAB1     ----------->GT1---------->DOF2  --------->ATHB51                          <---------ICU4     --------->ANAC58                     < <---------YAB1                             --------->ATHB51   --------->ANAC55(1)             ------ --------->ICU4                             -------->ATHB1     --------->ANAC46         <------------CBF -----TEIL                                  <--------HAHB4     --------->ANAC58--------->DAG2  <----- -->ANAC58      ---------->DOF2            --------->ICU4      <---------ANAC55(2) ---------->DOF2  < -->ANAC58   ------>NtERF2          <---------CCA1(2)<-----------GT1     --------->AHL20(2) ---------   ttcattattgaacgaggccaaagtgtctaatcttacccatatcgaattattattttaacaatttcacgtaaaaaaaaaaataaagcaaagtattgtcctt  7280800         <---------AHL20(2)        <---------ARR11(3)        --------->ARR11(3)        --------->AHL20(2)        <---------AHL20(1)                       --------->AHL20(2)        --------->AHL20(1)                     <-----------TBP     <---------AHL20(2)                <---------ARR11(3)                            <---------ATHB12     --------->AHL20(2)                --------->ARR11(3)                           <-----------HVH21   <---------YAB1                      --------->ARR14(2)         <---------CCA1(2) *TSS ---------AHL20(2)                     <---------ARR14(2)    <---------TOE2(3)    --------->MYB46(3) >ZmHOX2a(1)                       <---------AHL20(2)     --------->DOF5.7(2)    --------->ANAC58 -----DOF2 <---------AHL20(2) <---------AHL20(2) <---------AHL20(2)              --------->ANAC58 ---------YAB1     <---------ICU4 --------->AHL20(2) --------->ANAC46         ----------->HVH21 ->ID1  <---------AHL20(2)  <----------DOF2------>ZmHOX2a(1)<---------DOF5.7(2)<---------ALFIN1     -   tttttattaatatatttttaaaaattccctcttttatttaatatcctctatttatatgccattaacgtctatcttcttccctcacccatcaagtcccaat  7280900                                                                                                -----                                                                                                -----                                                                                                -----                                                                                              <------                                                                                              <------                                                                                              -------                                                                                              ------>NtERF2                                                                                          <---------SPL7                                                                                      --------->ALFIN1                                                                                     ------->MYC4                                                                                     <-------MYC4                                                                                     ------->MYC3                                                                                     <-------MYC3                                                                                     ------->PIF5                                                                                     <-------MYC2                                                                                     <-------PIF5                                                                                     ------->MYC2<---                                                                                    <--------ABF1----                                                                                    --------->O2<----                                                                                    <---------O2-----                                                                                    --------->TGA1a                                                                                    <---------TGA1a--                                                                                    =================                                                                                    <---------ANAC55(2)                                                                                    =================                                                                                    <---------ANAC46                                                                                    --------->ANAC55(2)                                                                                  <---------ALFIN1<--                                                                                  <------------OsbHLH66                     --------->ARR14(2)                                         ------>NtERF2 <------NtERF2                     <---------ARR14(2)                                         <-----------HVH21<---                     --------->ARR11(3)                                        --------->ANAC46------                     <---------ARR11(3)                                        --------->ANAC58------           --------->ANAC58                                                    ------->GAMYB --------           --------->ANAC58                                                    ======================          --------->WOX13(1)                                                   --------->ANAC58------       <-----------HVH21            ------->TEIL            ------>ZmHOX2a(1)  --------->RAP2.6(2)<--     <<<<<<<<<TAC1   --------->GLK1(2)          <------NtERF2                  ===============MYC_MYB   <---------ALFIN1 <---------GLK1(2)         <---------DEAR3(1)  ------>ZmHOX2a(1)------>NtERF2===== -------->ANAC46---------->DOF2  <---------ATHB12     <-----------GT1         --------->MYB46(3)-----   tcccaacactgtcactcaaaaagaatcttcaaacaatgaatctcaacgtcgtcgttttactcctactccttctaatctcatccgccacgtgttgtccgcc  7281000          --------->ZAT14       --------->DEAR3(1)       <---------ANAC58       <---------ANAC46       <---------ANAC58    --------->DEAR3(1)   --------->DEAR3(2) ---->RAP2.3(3) ---->ATERF1(2) ---->TGA1a ---At4g35610 ---ATERF1(1) -->At4g35610 --------HVH21 -->NtERF2<---------ZAT18                                                                          -- -----ATERF1(2)                                                                                    -- ---->RAP2.3(2)                                                                               <------ ------->SPL7                                                                           <------------ ===============================bZIP_DOF                                                ------------- =====bZIP_bZIP                                                                        -------------- -------MYB52(1)                                                                       <------------- ------RAP2.6(3)                                                                       -------------- --->RRTF1(1)                  <---------At4g35610                                     <------------- --->RAP2.3(1)                 --------->At4g35610                                     -------------- ->ANAC46 <---------ZAT14   <------ZmHOX2a(2)                                          -------------- =====MYC_MYB        <----------DOF2                                                   <------------- --->ERF1 --------->ZAT18  <-----------HVH21                                       <-------GAMYB  --- ----NtERF2         <---------ANAC58                                     --------->ANAC58 --------->MYB46(3) ===============================bZIP_DOF  ------->TEIL        <---------At4g35610 <-----------RAV1(1) ---->DEAR3(1)      <---------ANAC58<---------REM1(2)<------NtERF2       --------->ANAC58 <---------ALFIN1   gtcagaccgccgtgcacttctagctttccgatcagctcttcacgagccttacctcggcattttcaactcatggacaggccaagactgttgccacaactgg  7281100                                                 ------>NtERF2                                                 <---------At4g35610                                    ------>NtERF2--------->At4g35610                                    <---------RAP2.6(3)                                    <---------DDF1                                    ----------->RAV1(1)                                       <------                                   --------->DEAR4(1)                                        --------       --------->ZAT2              <---------ETT(1)                                      ------>MYB83       --------->At4g35610         --------->DREB2C(2)                                   --------->ARR14(2) ------->ANAC58                    --------->DEAR3(1)                                    <---------ARR14(2) ------->ANAC58                    --------->RAP2.3(3)                                   --------->MYB52(1) ---------AtSPL3                   --------->At1g77200      <---------At4g35610          ------>MYB46(1) ---AGL15                         <------NtERF2  <---------LBD16                 --------->ZAT2   --- -->AGL15                         --------->RAP2.3(1)     <-----------RAV1(2)    --------->At4g35610 --->AGL1                         --------->ERF1 --------->LBD16<---------ARR11(3)     <---------MYB46(2) ----AGL1                         --------->ATERF1(1)<---------ANAC46            <---------At4g35610 --->AGL2                        <---------ATERF1(1)------>NtERF2--------->CCA1(2)     --------->MYB46(3) ----AGL2                       <---------DEAR3(1)  <------NtERF2<------ZmHOX2a(2)     <---------MYB52(2) --->AG<---------At4g35610      --------->DEAR3(1) ------>NtERF2<---------ARR14(2)     --------->DEAR3(1) --->AGL3                      --------->ATERF1(1)<---------DEAR3(1)  <---------ATHB12--------->ANAC46 ----AGL3                     <-----------HVH21 --------->ANAC46--------->ARR14(2) ----------->HVH21- ------>SPL7           --------->MYB46(3)      <---------LBD16  --------->ARR11(3) --------->ZAT18<--   tacggtattagctgcgactcgctcactcaccgagtcgccgacataaatctccgcggcgagtcagaagatccaatcttcgaacgagctcaccgaaccggtt  7281200                --------->DEAR3(1)                --------->ANAC46               --------->LBD16      <-----------HVH21                        ------>NtERF2                         --------->GLK1(1)     ----------->HVH21                  <---------CCA1(2)                       ------>NtERF2 <---------WRKY18(1)             --------->ZAT18                                --------->LBD16 -----HVH21    <---------LBD16   <---------ZAT18          ------->GAMYB        <---------DEAR3(1) --->GT1   <-----------ARR10   --------->At4g35610       --------->MYB46(3)   <---------LBD16 ------>ANAC55(2)              <---------At4g35610    <---------YAB1      --------->ARR14(2)        - ---------->HVH21              --------->ZAT2 --------->ANAC46         ----------->GT1            --- -------ANAC55(2)------>NtERF2 <---------ZAT2<---------LBD16          --------->DAG2 <---------GLK1(1)   acatgaccggacacatctccgcctcgatatgtgagctcactcgtctctccgccattacaatcgccgattggaaaggtatctccggcgaaatccctaaatg  7281300                         --------->ANAC46             --------->ALFIN1                      --------->SPL7                 <---------MYB52(1)                      --------->ZAT14               --------->LBD16                      <---------ZAT18             <---------LBD16                          --------->At4g35610                      <---------ZAT14         <---------ARR14(2)                           <---------At4g35610                    <---------SPL7            <-----------ARR10                           --------->MYB52(2)                    --------->LBD16           --------->ARR14(2)  --------->ANAC46      <---------MYB52(1)                ------------------>SPL14     ------>MYB83         --------->ANAC58      <--------P -------->ZAT6  <-----------GT1              <---------CCA1(2)    --------->ANAC58     <-----------HVH21 ---->TEIL  <----------DOF2                  ------>MYB46(1)     --------->SPL7   <-----------GT1   tatcactcgtcttccttttctccgtacactcgacttaatcggaaaccaaatctccggtgggattccatacgacatcggaagattaaaccggttagctgtt  7281400  Previous    Next  AGI:  At3g20820.1    Description:  leucine-rich repeat family protein. similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT5G12940.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21943.1); contains InterPro domain Leucine-rich repeat, N-terminal (InterPro:IPR013210); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) Range:  from: 7280884    to: 7282183    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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