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AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                              ------
                                                                                              ------
                                                                                           ---------
                                                                                          <-------MYC3
                                                                                          <-------MYC2
                                                                                          ------->MYC4
                                                                                          ------->PIF4
                                                                                          <-------PIF4
                                                                                          ------->MYC3
                                                                                          ------->MYC2
                                                                                          <-------MYC4
                                                                                          ------->PIF5
                                                                                         --------->ANAC55(2)
                                                                                         <---------ANAC58
                                                                                         ===========
                                                                             <---------ARR14(2) <---
                                                                           <---------DEAR3(2)<------
                                                                           ----------->GT1<-------PIF5
                                                                           <---------MYB46(3)<------
                                                                        ------------>AtMYB77 <------
                                                                     <---------WOX13(1)  --------->O2
                              --------->ANAC46                     --------->ATHB12      <---------O2
                           -------->P                              <------------ATHB5    --------->TGA1a
                           --------->MYB52(1)                     <---------ATHB12       <---------ANAC58
                           ------>MYB46(1)                        <---------YAB1         <---------TGA1a
                           ------>MYB83                           --------->ICU4        ------------
                          <---------ALFIN1<---------ICU4    --------->ANAC46--------->At5g28300 ----
                  --------->ARR11(3)      --------->YAB1    --------->ANAC58<-------GAMYB===========
                  <---------ARR11(3)     <---------ATHB12   --------->ANAC58=======================MYC_MYB
              ---------->DOF2<---------LBD16             <-----------GT1===========================MYC_MYB
------>TEIL  <---------MYB52(1)--------->LBD16          <---------AHL20(2)<---------DEAR3(1)<-------
 
tgaacatttgccatcccttaagctcttccctacccgcgtttacaatcatcgcagtcgatttaaacgcccatgattgggcggttacattcttcacgtgcgg  7190200
                                                                        <---------ZAT2
                                                                        --------->ZAT2
                                                                        --------->At4g35610
                                                                        <---------At4g35610
                                                                       ----------->ARR10
                                                                   <------NtERF2
                                                                  ------>NtERF2
                                                                  <---------MYB46(3)
                                                                 <---------DEAR3(1)
                                                                 --------->ALFIN1
                                                                <------NtERF2
     <-----------HVH21                                          <-------GAMYB
    <----------DOF2                                             --------->ATERF1(1)
--->LBD16                                                      <---------DEAR3(2)
--------->AtSPL8                                               <---------ATERF1(1)
>ALFIN1 <---------LBD16                                        <---------MYB46(3)                  -
===============bZIP_DOF                                        <---------DEAR4(2)               ----
------ARR14(2)                                                <---------DREB2C(2)              -----
---ANAC46                                                     <---------DEAR3(1)          ------>ZmHOX2a(1)
---ANAC58                                                     --------->ALFIN1       <---------ALFIN1
---ANAC58                                 <---------MYB52(1) <---------ABI4(1)     ------>ZmHOX2a(1)
>OsbHLH66             <---------REM1(1)  <-------GAMYB      --------->LBD16     ------>ZmHOX2a(1)<--
----->ARR14(2)   ---------->DOF2        ----------->GT1    <---------DEAR3(1)  <---------ALFIN1-----
===============bZIP_DOF   <---------At4g35610             <---------LBD16    ------>ZmHOX2a(1) -----
--LBD16 <---------At5g28300          ------------>MYB.PH3(1)------>NtERF2   <---------ALFIN1  <-----
 
gtactctctttcacggctaccaaagttgtagctcatgaaaataccgttacaatgtgccatctccggcggtggctcagctcctcctcctccatcctcgccc  7190300
                                                                                   <---------ARR14(2)
                                                                        --------->ANAC58
                                                                        --------->ANAC58
                                                                       <-------TEIL--------->ARR14(2)
                                                                       ------->TEIL--------->ARR11(3)
                                                                       --------->SPL7
       --------->GLK1(2)                                             <---------SPL7<---------ARR11(3)
   --------->TOE2(3)                             <---------AHL20(2)  <---------ZAT18
-------->GLK1(1)                                --------->AHL20(2)  <---------ANAC58
----->LBD16                                     <---------AHL20(2)  <---------ANAC58
---->ANAC46          ---------->DOF2        --------->AHL20(2)      <---------ANAC46
----NtERF2       <---------MYB52(1)   --------->YAB1               --------------->AtSPL8
---->ANAC58     <-------GAMYB        <---------YAB1                <---------------AtSPL3
---->ANAC58    <---------MYB46(3)   <---------TOE2(3)              --------------->AtSPL3        <--
----LBD16<---------ICU4    ---------->DOF2----------->GT1          <---------------AtSPL8    -------
 
ggcattccataatcttggccgttggaaagaaaaagaattgatgataagaaaataaatagacttaatgaatagcgtacgtcccaaggtatcttcatccccg  7190400
                                                        <---------YAB1
                                               ------>NtERF2
                                              --------->DREB2C(2)          <------NtERF2
                                              <---------ALFIN1             --------->At4g35610
                                              ------->GAMYB           --------->ANAC58
                                              --------->DEAR3(1)      --------->ANAC58
                                             --------->MYB46(3)   --------->ANAC58
                                             --------->DEAR4(2)   --------->ANAC58
                                            ------>NtERF2        --------->MYB46(3)
   --------->TOE2(3)                       <---------ALFIN1    --------->ARR14(2)
 <---------TOE2(3)           <----------DOF2<---------ATERF1(1)<---------ARR14(2)
<-----------GT1          --------->WOX13(1)--------->ANAC46 --------->HSFB2a(2)
--------DOF2           <---------YAB1     --------->MYB46(3)<---------HSFB2a(2)   ----------->GT1<--
-->LBD16           --------->TOE2(3)<<<<<<<<<TBF1    <---------YAB1  ---------->DOF2         -------
 
ttttaacgtcaatagccctcatcgttatcaatctttttcttcttccccaccgccttgtgattactggaaccgcaaggcagcgagagagaaaaaaaaacta  7190500
       --------->ANAC58
       --------->ANAC58
       ------>MYB83
       ------>MYB46(1)                                      <---------ARR11(3)
     ------->GAMYB                                  ----------->GT1   --------->DAG2
    --------->MYB46(3)                       ----------->GT1--------->ARR11(3)
   -------->P                               <---------TOE1(3)      *TSS     --------->YAB1
  --------->WOX13(1)                        <---------TOE2(3)  ----------->GT1                   ---
----ZmHOX2a(1)     ---------->DOF2 <---------WRKY38(1)      --------->GLK1(2)                 ------
-->TOE1(2) <----------DOF2    <---------WOX13(1)   <---------TOE2(3) ---------->DOF2 ---------->DOF2
 
ggaatcaaccaagccttttaaacaaagacgaagattgatcaacgaataaggtttaatgtgaaaaatctgtaaaaaagtatcaaaatccaaaagtttaatg  7190600
                                                                  --------->LBD16
                                                                <---------LBD16
                                                               <---------ANAC46
                  ---------->DOF2                              --------->O2
               <------MYB46(1)                                 <---------O2
               <------MYB83                                 ----------->HVH21
             <--------P                                    <-----------HVH21
           <---------MYB46(3)                             <---------MYB46(3)                <-------
  --------->MYB52(1)     --------->ARR11(3)            <------MYB46(1)                      <-------
------->DOF2<-------GAMYB<---------ARR11(3)      <---------AHL20(2)            <---------TOE2(3)
--->AtLEC2 --------->ATHB12            ------->TEIL    <------MYB83<------NtERF2  --------->GLK1(2)
 
caaagaaacgaagatggttggaaaagaagatgtcttaatatgagcctctggtttaatttggtggtcacgcggagagacatttaagaatgtgtgttaaggc  7190700
                                                                                           ---------
                                                                                        <---------ALFIN1
  <---------------AGL15                                                                 --------->AtMYB61
  --------------->AGL15                 <---------DAG2                                  ------->GAMYB
 <-----------------AGL2                 <----------DOF2                                <---------MYB55(2)
 <-----------------AGL1           <---------ANAC58                                     --------->MYB46(3)
 <-----------------AGL3        ---------->ID1                                   --------->AHL20(2)
 ----------------->AGL3      <-----------RAV1(1)                            ------>ZmHOX2a(1)
--TOE1(3)                    <---------MYB46(3)                            <---------MYB59 <--------
--TOE2(3)             <-------TEIL<---------ANAC58                <---------ARR14(2) <-----------GT1
 
aattgctaattttggacacaagagtttcatatttgttgcttaacttttttttttttttttttttgagcaaatttgtttcctaactaaataaccaccgctt  7190800
                                                       <---------AHL20(2)
                                                       --------->ATHB51
                                                    --------->YAB1
                                                 <---------HSFB2a(2)
                                                 --------->HSFB2a(2)
                                             <---------PCF2
                                            <------MYB83
                                            <---------DEAR3(2)
                                            <------MYB46(1)
                                           <---------MYB46(3)
                                           --------->ABI4(2)
    <-----------GT1                        --------->MYB55(2)
  <---------YAB1                          <---------MYB55(1)                        --------->ZAT14
--------->AHL20(2)                       <---------MYB52(1)                         <---------ZAT14
>DEAR3(1)                          <-----------GT1--------->LBD16       <----------DOF2            <
-ALFIN1                       --------->AHL20(2) --------->HSFC1(1)  <---------ARR11(3)          <--
 
cgattattttcgatatgaaacaaactctggtcataaatttactcggtgggttccagaataatttggatactagttctttgttttcagttcagagtttttg  7190900
                                <-----------GT1
                --------->ARR14(2)
          --------->DAG2      <---------YAB1
         ---------->DOF2    <---------ZAT6                                                         <
  <---------ANAC58     <---------REM1(1)           <XXXXXXXXXXXXXXXXXXXXMIR837-3P                  <
  <---------ANAC58    ------->TEIL         <---------AHL20(2)                                      -
----------DOF2  <---------ARR14(2)      ----------->GT1                     --------->AHL20(2) <----
-------At4g35610--------->GLK1(2)<---------YAB1 <-----------GT1           --------->TOE2(3)   <-----
 
agctttcttgaataaagcgaatatggatgtagtattatcaatttagtaaattttcagttttttttttgtttttcttacataaattttcttactgattttt  7191000
                                          <----------ID1
                                     <---------AHL20(2)                  --------->HSFB2a(2)
                                  --------->AHL20(1)                     <---------HSFB2a(2)
     <---------At5g28300          <---------AHL20(1)                <---------HSFC1(2)
    <-----------GT1               --------->AHL20(2)                --------->HSFC1(2)
---------AHL20(1)               <---------AHL20(2)                  --------->HSFB2a(1)
---------AHL20(2)               <---------AHL20(1)                  <---------HSFB2a(1)
-------->AHL20(2)            --------->AHL20(2)               <---------LBD16                  <----
-----AHL20(2)        <------------MYB.PH3(1)                 ----------->RAV1(2)         --------->ANAC58
----YAB1        ----------->GT1 --------->AHL20(1)         <-----------GT1               --------->ANAC58
 
attttatttacagtttatgtggtaacagtttttaaaatattttataagacaagttgttcaatttacctggaaacttctagattgaattggccaaacaact  7191100
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AGI:  At3g20580.1   
Description:  COBL10 (COBRA-LIKE PROTEIN 10 PRECURSOR). Identical to COBRA-like protein 10 precursor (COBL10) [Arabidopsis Thaliana] (GB:Q9LJU0); similar to COBL8 (COBRA-LIKE PROTEIN 8 PRECURSOR) [Arabidopsis thaliana] (TAIR:AT3G16860.1); similar to ATSEB1 [Arabidopsis thaliana] (TAIR:AT4G16120.1); similar to COBL11 (COBRA-LIKE PROTEIN 11 PRECURSOR) [Arabidopsis thaliana] (TAIR:AT4G27110.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69680.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39012.1); similar to brittle stalk-2-like protein 5 [Zea mays] (GB:NP_001105996.1); contains InterPro domain Phytochelatin synthetase-like co
Range:  from: 7187862    to: 7190568    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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