Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             --------->HSFB2a(2)           ------>ZmHOX2a(1)           <---------HSFB2a(2)          <---------LBD16         ----------->RAV1(2)      <---------At4g35610   --------->At4g35610   <---------ZAT2                                         ===========================HOX2a_HOX2a   <---------At4g35610                                    ------>ZmHOX2a(2)  ===================RAV                                <---------AGP1  <-----------RAV1(1)                                   --------->ARR14(2) ---------ZAT2                                        ===============================HOX2a_HOX2a ---------At4g35610                                   ------>ZmHOX2a(2) -------->At4g35610                                  <------ZmHOX2a(2) ----------RAV1(1)                                   ================================HOX2a_HOX2a ----->At4g35610                                    <---------ARR14(2) ------ZAT2--------->LBD16 <---------ANAC46         --------->ARR14(2)            <---------ZAT14 ------At4g35610         ------>NtERF2         --------->MYB52(1)             <------ZmHOX2a(1) -------RAV1(1)          --------->LBD16  <-----------------AGL3        <---------LBD16 -->At4g35610           --------->DEAR3(1)----------------->AGL3       --------->MYB52(1)     >>>>>>> ---At4g35610           --------->ANAC46  ----------------->AGL2     --------->MYB46(3)      -------- ----RAV1(1)      <-----------GT1    <---------MYB52(1) <---------ARR14(2)--------->LBD16   <--------   gctgctgctgctcctggaaattacctccgccgtataaccgatggtccataaacggatcgatctggttctgaatcaccggaggagaacagaggttttgatt  7086400                                                                                           <------NtERF2                                                                                          <---------DEAR3(2)                                                                                        ------>NtERF2                                                                                        <------NtERF2                                                                                      <---------DEAR3(1)                                                                                      <---------RAP2.3(2)                                                                                     --------->SPL7                                                                                    --------->ALFIN1                                                                                  <---------TGA1a                                                                                  <---------ANAC58                                                                                  <---------ANAC55(2)                 <------MYB46(1)                                                  --------->ANAC55(2)      <------MYB83                                                                <---------ANAC55(1)     --------->MYB111(2)                                                          <---------ANAC46     --------->MYB59                           --------->LBD16                    <---------ANAC58     --------->MYB111(1)                      --------->HSFB2a(2)                 --------->TGA1a     --------->MYB46(2)                       <---------HSFB2a(2)              --------->ARR14(2)    <---------MYB55(1)                       ------>ZmHOX2a(2)               <---------MYB46(3)    <--------P   <------MYB83       <---------KAN4(2)                       <---------TOE2(2)  ------ <---------AtMYB61     =============================HOX2a_HOX2a          --------->ANAC46<---------DEAR3(1) >>ARR2        <--------P       <------ZmHOX2a(1)                       <---------LBD16<---------RAP2.3(1) ->ATHB12    <---------MYB46(3) ====================HOX2a_HOX2a <----------DOF2<---------ARR14(2) -YAB1<------MYB46(1)  <------ZmHOX2a(1)     <---------LBD16    ============================bZIP_DOF   gtggaggtaggtgagaggttggagaggagaagaaggagaacaatcgatcgggaaattggtcttggcctttggaccacggaggttacgtgcggcggtatcg  7086500                                                                           ----------->RAV1(2)                                                                           <---------ZAT2                                                                           --------->ZAT2                                                                           --------->At4g35610                                                                       ------>ZmHOX2a(2)                                                                      <------ZmHOX2a(2)                                                                      --------->GLK1(1)                                                                     --------->ARR11(3)                                                                     <-----------ARR10                                                                     <---------ARR14(2)                                                                     --------->ARR14(2)               <---------LBD16                                    --------->ANAC55(2)      <---------ZAT14                                             <---------ANAC55(2)     --------->ALFIN1                                             --------->ANAC58    ------->PIF4                                        <---------AHL20(2) <---------At4g35610    <-------PIF4                                       <---------AHL20(2)<-----------RAV1(2)    ------->MYC3                                    <---------AHL20(2)<---------GLK1(1)    ------->MYC2                                  <---------RVE1(1)  <---------AGP1    ------->PIF5           ---------->DOF2        <---------CCA1(1)  <---------ARR11(3)    <-------PIF5  <---------LBD16                --------->ARR11(3)  ------->TEIL    <-------MYC2--------->ANAC46                 <---------GLK1(2)--------->ANAC46 --------->DEAR3(2)    <-------MYC3<---------DEAR3(1)               <---------ARR11(3) <---------CCA1(2)         <------   <---------ANAC46   --------->ARR14(2)     --------->ANAC46     --------->ANAC55(1)         -------   <---------ANAC58   <---------ARR14(2)     --------->ANAC58     --------->ANAC58<-----------ARR10   <---------ANAC58  <------NtERF2           --------->ANAC58    <---------LBD16  --------->ARR14(2) --->YAB1<---------At4g35610  xxxxxxxxxxxxxxxxxxx>smallRNA(si3)<------ZmHOX2a(2)  <---------ARR14(2)   taagcgcgtgcagcatctacggcggaatcgaaagtaccgagccagacacgagatttttttaatggatcacggatctcagctgcgaatcgaccccaaggtc  7086600                                                 --------->HSFB2a(2)                                             <---------MYB52(1)                                             --------->ARR14(2)                                             <---------ARR14(2)                                            <-------GAMYB                                            --------->At5g28300                                          <---------DEAR3(1)                                          <---------ANAC46                                         <---------MYB52(1)                                       <---------ATERF1(2)                                       --------->ATERF1(2)                                      --------->DEAR3(2)                                   --------->MYB46(3)                                  <------ZmHOX2a(2)         <---------PCF2                                 --------->ARR14(2)         <---------ARR14(2)                                 <---------ARR14(2)        --------->ATERF1(1)                                 <---------ARR11(3)        <------NtERF2                                 --------->AGP1  <---------HSFB2a(2)<---------LBD16                                 --------->ARR11(3)       <---------ATERF1(1)                          <-----------HVH21<---------DEAR3(2)      ------->GAMYB                     <---------At4g35610------------>AtMYB77--------->ARR14(2)           ------------      --------->ANAC58    ===============HOX2a_HOX2a     <---------DEAR3(1)              <-----------      --------->ANAC58    ------>ZmHOX2a(1)<---------MYB46(3)     --------->MYB46(3)    -------------    --------->MYB52(1) ------>NtERF2<---------ALFIN1     <---------ANAC58               -------------   ------>ZmHOX2a(1)<---------ATERF1(1)--------->DEAR3(1)<---------ANAC58            <----------DOF2 ---ARR11(3)       <---------DEAR3(1)--------->MYB52(1)  <---------ANAC46----------->ARR10------>ZmHOX2a(1) -->ARR11(3)      <xxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)<---------MYB46(3)        <---------DAG2 --   tcttcctaacgcctctatacctcggctccttcacagatccaccggcggttactggaagggcgggtccaacgacggaagagcctctccctttcctcatgga  7086700                                           ------>ZmHOX2a(2)                                          <------ZmHOX2a(2)                                          --------->CCA1(2)                                         <---------ARR11(3)                                         <---------ARR14(2)    ---------->DOF2                      --------->ARR14(2) --->AGL15                               --------->AGP1 ----AGL15                               --------->ARR11(3) ---->AGL1    --------->ANAC58          --------->GLK1(1) ---->AG    ---------->DOF2             <---------GLK1(1)                                          <- --------->GT1--------->ANAC58         ----------->ARR10<---------ANAC46                  ---------->DOF2   gaagaaaaaagatgtaaagccagaagtaatgtgatgaagaagagatctgtgtgtgtttgtgtgaagaagagaagaaaatgttgaagagagaagaaagatg  7086800                                            <---------YAB1                                           --------->AHL20(2)                                           <---------AHL20(2)                                          --------->YAB1                                         <---------YAB1                                       --------->YAB1                                               <                                       <---------ICU4                                               -                                      --------->ICU4                                                -                                      <---------YAB1                                               --                                    -------->ATHB1                                                 <-                                    <---------ICU4                                              <----                                    --------->YAB1                       <-----------GT1        <----                                   --------->ICU4                    --------->AHL20(2)         -----                                   <---------ATHB51                  <---------AHL20(2)     ---------            <----------ID1    ----------->GT1       <----------DOF2  --------->AHL20(1)     <--------           *TSS  --------->MYB52(1)--------->AHL20(2)               <---------AHL20(2)     --------->AHL20(2)       <---------REM1(1)   <------------CBF<---------AHL20(1)       --------->AHL20(2) <---------YAB1 -----ZmHOX2a(1)---------->DOF2    <---------AHL20(2)        <-----------GT1  ---------->DOF2   -----   aggaagaagatgaaggaacaaagggtagagattggaaattattattataattctctttttttttttctaaataatttactcaaagaattttcatttaata  7086900             --------->ATHB51             <---------ICU4             <--------ATHB1             <---------AHL20(2)             --------->AHL20(2)            --------->ICU4        --------->AHL20(2)       --------->YAB1     <---------AHL20(2)     --------->AHL20(2)    --------->AHL20(2)    --------->YAB1    <---------AHL20(2) ---------AHL20(2) -------->AHL20(2)      <------MYB83                                                          ------- -------->AHL20(1)    <--------P<---------DAG2                                             <---------ALFIN1 ------->AHL20(2)   --------->ATHB12                                                  --------->ANAC46 --------AHL20(2)   <---------MYB46(3)                   ----------->GT1              --------->ANAC58 -----AHL20(2)     <---------TOE1(3)                     <---------MYB46(3)           --------->ANAC58 -----AHL20(1)     <---------TOE2(3)                   <---------ANAC58             <---------ALFIN1 ---->AHL20(1)     <---------YAB1                      <-------GAMYB              <-----------HVH21 >AHL20(2)  <---------YAB1      <----------DOF2        <---------ANAC58          --------->TOE1(3) -AHL20(2)--------->YAB1<------MYB46(1)    <----------DOF2<-------GAMYB          --------->TOE2(3) ---->AHL20(2)  <---------AHL20(2)    <----------DOF2 <---------MYB46(3) <-----------GT1  -----------   aattaattaaaataataatttatggttggaatagctttttcttttctttttttttttggttgttaatttcgattttttctctaccttcacgcccgaccca  7087000                                        <-----------GT1                                <---------ICU4                               <---------ATHB51                               --------->ICU4                            <---------AHL20(2)                            --------->AHL20(2)     ------>MYB46(1)       <---------AHL20(2)     ------>MYB83 <----------DOF2    ----------->GT1                                            -----    --------->ORA47(1)     <---------AHL20(1)              <---------GLK1(2) <----------DOF2    <----  --------->DEAR3(2)       --------->AHL20(1)      ------>ZmHOX2a(1)   <----------DOF2          <---- -->MYB46(3)  <---------MYB52(1)-------->HAHB4    <---------MYB59   <-----------GT1 <----------DOF2 >HVH21--------->AtMYB61   --------->AHL20(2)  <-----------GT1 <----------DOF2   <-----------GT1-----   caagaccgaccaattcgtttctttaaaaatttaattatggagtaacatttttcctaacttggattctttttttcttttgctttaaactttttattcgata  7087100       ----------->GT1     ----------->GT1                 <---------ZAT14    --------->ALFIN1                 <---------ZAT18  <---------ANAC58                   --------->ZAT18  <---------ANAC58        <---------AHL20(2)  <---------ANAC46        --------->AHL20(2)                                    --------->ANAC58 ---->AHL20(1)        <---------AHL20(2)                          ----------->GT1    ------->PIF5 -----AHL20(1)        --------->AHL20(2)                        ---------->DOF2 --------->ANAC58    - -----ARR11(3) ------------------------>ANAC81     --------->HSFB2a(2)        <--------P            - ---->ARR11(3) <----------ID1 ---------->DOF2      <---------HSFB2a(2)---------->DOF2<-------PIF5 ---   tattgtgtggagaaaaaaaaacaaaaaattaaaaaagagttcacaagagatgtctcgaaatgcgaagaaagtaaaagagggtaagcacttgcactctctg  7087200                            --------->ARR11(3)                            <---------ARR11(3)                         <---------AHL20(2)                                          --------->ZAT14              --------->GLK1(2)                                                      <---------ZAT18      ----------->HVH21  --------->AHL20(2)                                          --------->ZAT18 ----->ZmHOX2a(1)     --------->YAB1                                                 <---------ZAT14 ---------->HVH21    <---------AHL20(2)           <---------MYB46(3)           ------>MYB46(1) -------->RAV1(2)   --------->AHL20(2)      <---------MYB52(1)     ------->TEIL------>MYB83    ------   tcctgaccctgaccacaatctatataataaaatcttatgtcttactgtttgtttgttatcaaattgatgcacctagagaccaaatagtccacttgtaatg  7087300  Previous    Next  AGI:  At3g20310.1    Description:  ATERF-7/ATERF7/ERF7 (ETHYLINE RESPONSE FACTOR7); DNA binding / protein binding / transcription factor/ transcription repressor. Identical to Ethylene-responsive transcription factor 7 (ERF7) [Arabidopsis Thaliana] (GB:Q9LDE4;GB:Q0WR62); similar to ATERF3/ERF3 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 3), DNA binding / protein binding / transcription factor/ transcription repressor [Arabidopsis thaliana] (TAIR:AT1G50640.1); similar to putative ethylene responsive element binding factor [Brassica rapa subsp. pekinensis] (GB:ABB51576.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Patho Range:  from: 7084812    to: 7086811    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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