Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    --------->ANAC58                                                        <------ZmHOX2a(2)                  --------->ANAC58                                                      --------->GLK1(1)           ---------->DOF2                                                        ---------->DOF2   ----------->RAV1(2)                                                     <---------HSFB2a(2)   --------->At4g35610                                 --------->ARR14(2)  --------->HSFB2a(2) -------------AtSPL8                      <---------YAB1              <<<<<<<<<TBF1--------->DAG2 ------------>AtSPL8<------ZmHOX2a(1)  ------>ZmHOX2a(1) <---------LBD16 <---------At4g35610 --------AGL1<---------TOE2(3)        --------->TOE2(3)<---------ARR14(2)--------->At4g35610     ----   ttggtacctgaaacaaaggtaaggaatttctcttcttgttccttattaatctcatcgtattcggaatatttcttcttctgaaaaaaaaggagatcgaaat  7006500                                                                                         <---------ANAC46                                                                        <---------HSFB2a(2)<---------ANAC46                                                                   <---------REM1(1)     <---------ANAC58                                                                   ========================RAV                          --------->LBD16                   --------->ANAC46             <------MYB46(1)                         <---------ANAC46                   --------->ANAC58             <---------ANAC58                         --------->HSFB2a(2)                --------->ANAC58             <------MYB83                        <---------LBD16                   --------->MYB52(1)    <---------LBD16                      --------->GLK1(2)                 <---------AHL20(2)     ----------->RAV1(2)                      <---------ARR14(2)                --------->AHL20(2)    --------->GLK1(2)     <              --------->DAG2                     --------->ANAC58  <-----------RAV1(1)  --------->MYB111(2)          --------->LBD16<---------HSFB2a(2)     ----------->GT1  <---------ARR11(3)    --------->MYB46(2) ----->YAB1  ---------->DOF2   --------->GLK1(1) --------->ANAC58 --------->ARR11(3)    <---------AtMYB61   caaaatcgaacccagaaaagcgaaattccggagaaaccctcagaaattgacaagaaaattaaacggaagatgttgcagaaaacctggagtttggtgtatt  7006600                                                                                        --------->ANAC58                                                                                   ---------->DOF2                                                                                 --------->LBD16                    <---------At4g35610                                         --------->ANAC58                    --------->At4g35610                                         --------->ANAC58                   --------->ARR11(3)                                          <---------LBD16              <------NtERF2                                                  <---------ARR14(2)            <---------ANAC58                                                 --------->ARR14(2)            <---------ANAC46                                               --------->ANAC46            <---------ANAC58                      <---------ZAT14          ----------->HVH21       <---------ANAC58                 --------->ZAT14                   --------->MYB46(3)       <---------ANAC58          <---------At4g35610                     <-----------------AGL1     --------->ARR11(3)          --------->At4g35610                     ----------------->AGL1 ---------ANAC46   <---------ARR11(3)   <---------ZAT14             --------->ATHB12    --------->ANAC58   tgtcgtagagcttggcgtagagagcttccattttctgctcactgtagaagagtgaagaatcaaatcaaattgattacccgacccggaaagaagcaaaatc  7006700                                                    <---------GLK1(2)                                                    <---------ARR14(2)                                                    --------->ARR14(2)                                                  --------->LBD16                                <---                                                 --------->HSFB2a(2)                             <---                                                 <---------HSFB2a(2)                           ------  --------->ZAT2                          <---------AtMYB61      ----------->TGA1              ------  --------->At4g35610                   <----------DOF2     <------ZmHOX2a(1)        ---------->DOF2   gacgagcttacaaattcgattcaagagagcaaaacacactcgctttggtttccagatttgaaggagaatgacgaaactgatgaattcaaaagagaccaac  7006800                           ----------->HVH21                   ------>NtERF2                   <---------ATERF1(1)                  <---------O2                  --------->O2                  ----------->HVH21                  --------->DEAR3(1)               --------->TOE2(2)               --------->DEAR3(1)                          --------->MYB52(1)   <---------AHL20(2) ------>NtERF2                       <---------WRKY38(1)   ---------->DOF2  --------->AHL20(2)--------->ATERF1(1)                   <---------WRKY12    --------->HSFB2a(2) -------DOF2   --------->TOE1(2)               <---------YAB1<------------MYB.PH3(1) ------DAG2   --------->MYB46(3)               <---------AHL20(2)             <---------HSFB2a(2) >MYB46(1)    --------->DEAR3(2)              --------->AHL20(2)         <<<<<<<<<TBF1            <-- >MYB83     --------->MYB52(1)                <---------AHL20(2)     <-----------GT1       <<<<<<<<<<GT-3b   tttataaaattcccaaaccgacgacgcctatgacactgagaagtggattttaattctagggcaacggtttttttcttcttctcaaagcactatttttctt  7006900                                                                                                 ----                                                                                           ------>ZmHOX2a(2)                                                                                          <------ZmHOX2a(2)                                   --------->GLK1(2)                                     <---------ARR11(3)          --------->AHL20(2)   --------->YAB1                                            --------->ARR11(3)          <---------AHL20(2)  <---------YAB1                                             --------->AGP1         --------->AHL20(2)<---------YAB1                                               --------->RVE1(1)      <---------AHL20(2)*TSS--------->YAB1             <------------CBF              ================  <----------DOF2   --------->ARR11(3)     >>>>>>>>>MYB2    --------->ARR14(2)       ---------->DOF2 -------CCA1(2)     <---------ARR11(3)<---------YAB1  --------->ATHB12 <---------AHL20(2)<---------AGP1   ctatctttttatttaattttaagttcttaattataagaatatgaaaaccaagttatccattggattcacacatttttttttttgatgaaaagatctattt  7007000                   <---------------AtSPL8                 <---------ICU4                 --------->ATHB51                --------->ICU4              --------->YAB1          ----------->HVH21      <---------TGA1a                   <---------TGA1a                                            --      --------->TGA1a                   --------->TGA1a                                           <--    <---------ALFIN1      --------->ANAC58                                                    <------  <---------ALFIN1<------------CBF      --------->O2                                        --------- <---------WRKY38(1)      --------->ANAC46                                                 ------>ZmHOX2a(1) <---------ZAT18<---------YAB1          <---------O2                                     --------->YAB1 ----->MYB59 ----------------->AGL1 <-----------HVH21                     ------>ZmHOX2a(1)<---------YAB1 ===============bZIP_DOF  --------->ANAC58                  --------------->AtSPL8 <-----------GT1---   tggtccacacttgtgaccataattgtacatgccatgaaggtcacgagagtttcgctgggaacttagtacaaatttcctctgttataaacaatcctgattg  7007100                                                            <---------DOF5.7(2)                                                           --------->WRKY38(1)                                                           ----------->HVH21                                                           --------->WRKY12                                                          --------->DOF5.7(2)                                 ------>MYB46(1)          <---------MYB52(1)           <---------ARR14(2)    ------>MYB83            <-------GAMYB           --------->ARR14(2)   --------->MYB55(1)    <---------At5g28300       <---------LBD16         --------->AtMYB61     <-----------GT1 ------->ATHB12                <---------MYB46(2) <---------bZIP60(1) -------YAB1    ------>ZmHOX2a(1)-------->P       --------->TGA2(1) ---WOX13(1)<---------GLK1(1)  <---------MYB59    --------->bZIP60(1)                   ------>ZmHOX2a(1) >ATHB12   <---------GLK1(2)   <---------MYB111(1)<---------GLK1(1)          --------->REM1(1) ------>ICU4--------->GLK1(1)------->TEIL       --------->YAB1             ------>ZmHOX2a(1)   attattgactacggattcctcttgtttcatcaacctaccaaaaaaaacaatgatatcaccgttgacgctcaaaactccttcatcttcatcctcttatgtc  7007200                                                  ---------->DOF2                                         <------ZmHOX2a(1)                                       <---------TOE2(3)                    <---------LBD16   <------ZmHOX2a(1)                                      --------->MYB52(1)              --------->ARR11(3)    ---------            <-------GAMYB           --------->TOE2(2)       <---------TOE2(3)        --------->LBD16           <-----------RAV1(1)--------->ANAC58 <----------DOF2        <---------ARR11(3)    ---------       <---------ZAT14        --------->ANAC46<---------ANAC58--------->ARR11(3)    --------->ANAC46       --------->ZAT14        --------->ANAC58<---------ANAC58<---------ARR11(3)   <---------LBD16 --   tcttctcacttctctgttgctatctcttcttcaagaaacctaaggatggctttatagcgaataagataatgagatttttggggaacacggagaagaggag  7007300                                                        ------>ZmHOX2a(2)                                                        ===========================HOX2a_HOX2a                                                       ============================HOX2a_HOX2a                                                       <------ZmHOX2a(2)                                                      <---------ARR11(3)                                                      <---------GLK1(2)                                                      <---------ARR14(2)                                                      --------->ARR11(3)                                              --------->YAB1 ------->TEIL                                  --------->TOE2(3)   --------->ARR14(2)               --------->ANAC46                                 ----------->GT1      --------->AGP1        --------->ICU4                                 <---------ZAT6 <---------YAB1         <---------bZIP60(1)   <------ZmHOX2a(1)  *TSS ------->TEIL  <---------ANAC58   <---------GLK1(2)          --------->ANAC58 --------------->ANAC81 <---------WOX13(1)   <---------YAB1 <---------CCA1(2)          --------->ANAC58 >ALFIN1             <---------YAB1      <---------ANAC58 ------>ZmHOX2a(1) ------>ZmHOX2a(1) -------->DOF2       --------->ICU4<---------YAB1  <---------WOX13(1)  --------->bZIP60(1)      -----   ccaaaggacatcaagatggagacatgatggacgtattgttaatgcttatgatgatagatcctgaatcttggtgatgtcctaatgagtttaagccagagag  7007400  Previous    Next  AGI:  At3g20070.1    Description:  TTN9 (TITAN9). similar to unnamed protein product [Vitis vinifera] (GB:CAO16820.1) Range:  from: 7004678    to: 7006924    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g20075.1    Description:  pseudogene, cytochrome P450 (fragment), blastp match of 47% identity and 1.1e-15 P-value to SP|Q42799|C932_SOYBN Cytochrome P450 93A2 (EC 1.14.-.-). (Soybean) {Glycine max} Range:  from: 7007322    to: 7007659    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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