Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                <---------YAB1            --------->YAB1           <---------YAB1        <---------AHL20(2)        <---------AHL20(1)                                                       <---------AHL20(2)        --------->AHL20(1)                                               <------ZmHOX2a(2)    --------->YAB1                                                      <---------ARR11(3)    <---------ICU4                                                      --------->ARR11(3)    <--------HAHB4                                                     ------->GAMYB   <---------ATHB12               <-------TEIL                      --------->MYB52(1) --------->WOX13(1)           <---------ARR11(3)                    --------->YAB1          <-------- ----->At4g35610      ---------->DOF2  ----------->GT1        <---------At4g35610--------->AHL20(2) -ICU4  --------->AHL20(2)    <---------AHL20(1)    <-----------GT1 <-----------GT1   <-------TEIL   gctcaatcattttattatcagtgagaaagctatatattcatgtgttaatagttttttctgtttcatctaataacgatctagatttatattcattctttta  6849100                                                                         --------->HSFB2a(1)                                                                         <---------HSFB2a(1)                                                                         --------->HSFC1(2)                                                                         <---------HSFC1(2)                                                                        --------->ARR11(3)                                                                        <---------ARR14(2)                                                                        <---------ARR11(3)                                                                        <-----------ARR10                                                                        --------->ARR14(2)                                                                        --------->GLK1(2)                                                                       <---------GLK1(2)            <             ----------->RAV1(2)    --------->At4g35610        ---------->DOF2                      -         <---------MYB52(2)      <---------At4g35610        --------->At4g35610                    <-         --------->MYB46(3)      --------->At4g35610    --------->ARR14(2)                         -- --DOF2<-----------GT1           --------->ZAT2         <---------ARR14(2)--------->KAN4(2)     -----   agtcatatataacaaacctggccatactgaagaacagcagcgcaagggttaagttgcaaatcagcaaaaggaagaatcttcccctcttgaaaactctctc  6849200                               --------->SPL7          --------->ANAC46    --------->SPL1(1)    <---------ZAT18          <---------SPL1(2)    --------->ZAT18          <---------SPL7    <---------ZAT14         <---------ANAC58                   ----------->HVH21  <---------WOX13(1)        <---------ANAC58                 <---------O2 ---------ICU4             --------------->AtSPL8            --------->TGA1a -------->ATHB12           --------------->AtSPL3            --------->O2                     ------- --------YAB1              <---------------AtSPL3            <---------TGA1a          --------->LBD16 ------->ICU4----------->RAV1(1)    --------->MYB46(3)     <---------ALFIN1          --------->ANAC46 ------->ATHB5    <-------TEIL<---------SPL1(1)     <-----------ARR10     <---------CCA1(2)  --------   catgattgcacttcgcaacatacatataatccgtacgaacaaacttgaatgccaactcttcccacttgacattcgcatatttttcatccgaaacactgta  6849300                                                                     <---------AHL20(2)                                                                     <---------YAB1                                       --------->YAB1                --------->AHL20(2)                                      <---------ATHB12              <---------AHL20(1)             --                               ------>ZmHOX2a(2)                    --------->AHL20(1)       --------          --------->AHL20(2) --------->ARR11(3)               <-----------GT1                <-------  <---------YAB1         ---------->DOF2                    --------->AHL20(2)     <---------ARR14(2) -->At5g28300   <----------ID1<------ZmHOX2a(2)             <---------AHL20(2)   --------->ANAC46<--- --->GT1 --------->AHL20(2)  <---------ARR11(3)       --------->YAB1--------->AHL20(2)       --------   aattttgataaataaaaaaaaacaaaaaaaagatcgccaaatcatatttcatactatcagatttaaacaatataatttgttcgacgatacagaaatattt  6849400                                                                       <------MYB46(1)       <------ZmHOX2a(1)                                               <------MYB83 ----------->HVH21                                                    --------->MYB111(1) ------->ANAC46                                                       --------->MYB59 ->AHL20(2)              <------ZmHOX2a(1)                <----------DOF2        --------->ANAC46 --AHL20(1)       --------->LBD16                        <---------ANAC58        --------->ANAC58 --------GT1     <---------ANAC46        <---------MYB46(3)           --------->MYB46(2) ->AHL20(1)   --------->ALFIN1    ------->TEIL           <---------ANAC58        --------->ANAC58   -   tacctcacaggaagaggttgcgcagaaggagccatggatgtgtttgttcgagtcgagttgctttgttgtaagtaggtaattgcaagaaacttgagttgtc  6849500                                                                                               ------                                                                                              -------                                                                                            ---------                                                                                           <---------YAB1                                                                                          <---------AHL20(2)                                                                                          --------->AHL20(1)                                                <------------------------ANAC81           --------->AHL20(2)                                --------->DOF5.7(2)                                       <---------AHL20(1)                             <-------TEIL   <---------AHL20(2)                           --------->YAB1                        <-----------TBP    <---------AHL20(1)                           <---------YAB1     <----------DOF2  --------->AHL20(2)   <---------AHL20(2)                        <---------YAB1   *TSS               <-----------TBP      --------->AHL20(2)        <-----------GT1 <---------AHL20(2) --------->DOF2     <----------DOF2   ------------>CBF      <-----------GT1  <------------CBF <------   tataaagctttggaatacttctctttatatatacgtttacaacaattttttttttttttttttttctatttttacaacaaattgttttttattataataa  6849600                              ---------->ID1                                  <-----------GT1                     --------->ARR11(3)                                    --------->TOE2(3)                     <---------ARR11(3)                                    --------->YAB1                    --------->RVE1(1)                                    <---------ARR14(2)                    --------->CCA1(1)                                    <---------ARR11(1)      <---                  --------->AHL20(2)                       <---------------AtSPL3                ----                 <---------AHL20(2)                    <---------ANAC58  <-----------ARR10       <--- --------->TOE2(3)--------->YAB1                       <---------ANAC46  ------->TEIL           ----- --->YAB1     --------->AHL20(2)       <---------------AGL15             --------->ARR14(2)     ----- -->ICU4     <---------AHL20(2)        --------------->AGL15            <---------CCA1(2)       <---- >YAB1 --------->ANAC46   <----------DOF2   ---------->DOF2--------------->AtSPL3  <----------DOF2 ---YAB1     --------->AHL20(2)       --------->TOE2(3)<---------ANAC58 <---------ARR14(1)<----------DOF2   taaacttaaacgaaaataaataatatctctttgttctatttcttaaaaaagaaattagcttgtagtacttcaacgtatcttaactctttagtctttagta  6849700                                                              --------->ICU4                                                              --------->AHL20(2)                                                         --------->ANAC55(2)                                                         --------->ANAC58                                                         --------->ANAC58                                                        <-------TEIL                                                        ------->TEIL                                                        <---------TOE1(2)                                                        <---------TOE2(2)                                                    <---------------AtSPL8                                                    <---------------AtSPL3                                                    --------------->AtSPL3                                                    --------------->AtSPL8                            <---------AHL20(2)      ------->TEIL                        <---------AHL20(2)        <---------ZAT14  --------->WOX13(1)                       <---------YAB1             <---------ZAT18<---------YAB1                      <---------AHL20(2)         <---------ZAT6<---------AHL20(2)                    <---------YAB1              <---------------AtSPL8 ---MYB83         --------->AHL20(2)            <---------------AtSPL3 ------->GT1      <---------AHL20(2)           <XXXXXXXXXXXXXXXXXXXXMIR416 ---MYB46(1)  --------->AHL20(2)            --------->YAB1  ------->TEIL ---->MYB111(1)  <---------AHL20(2)        <---------YAB1<---------ANAC55(2) --------->ARR11(3) ---->MYB59   <---------AHL20(2)        <---------YAB1--------->TOE1(2)   --------->YAB1     -------- -----TOE1(2)--------->AHL20(2)       <-----------GT1 <---------SPL7  --------->YAB1    ----------->GT1   ggtatatatcatctatttatttatttttattttttttatattacgattatagtgtacgtacgtatttattaatcaaaaataacttggtagaagtaaaaag  6849800                                                                                                   <-                                                                                                  <--                                                                                                 <---                                                                                                 ----                                            --------->YAB1                                       <---                                 --------->TOE2(3)                                               <---      <---------AHL20(2)        <---------ANAC46                                                 <--- --------->ICU4                <---------TOE2(3)         <-----------GT1                        <---- -->DOF2     <-----------GT1  <-----------GT1      <---------REM1(1)                           <-----   aaaatgattttttttttactcagtgatcagttttacgtttattcaaaaataagttgtagtttccttcttaatattcaagttatatgactaaaaattggtc  6849900                                                         --------->ALFIN1                                                        <-------PIF5                ----------->GT1                                                        <-------MYC3               --------->ALFIN1                                                        ------->PIF5              ------->MYC3                                                        ------->MYC2              <-------PIF5                                                        <-------MYC2              ------->MYC2                                                        ------->MYC3              <-------MYC2        --------------->AGL15                          <---------ANAC46           ------->PIF5        <---------------AGL15                          <---------ANAC55(2)       --------->TGA1a       <---------YAB1                                  --------->O2              --------->O2     <-----------GT1                                   <---------bZIP60(2)       <---------bZIP60(2)    --------->AHL20(2)                                 <---------TGA1a           ==================== --------MYB52(1)                                     ------------>OsbHLH66      <---------ANAC46 -----GAMYB                                       <---------ICU4                 <---------O2 ---MYB46(1)                             --------->ANAC55(2)                     <---------ANAC55(2) ------->GT1 <---------TOE2(3)           <---------ANAC55(2)                     <---------TGA1a  <-- ---MYB83    <---------TOE1(3)        <------ZmHOX2a(2)--------->TGA1a       <-----------HVH21   <--- ------DEAR3(2)                      --------->ARR11(3)<---------O2       <---------ANAC58       <--- ------MYB46(3)         <---------ARR14(2)       --------->ICU4           <---------ANAC58   -------- -----DEAR3(1)          --------->ARR14(2)   <---------ARR11(3)       <------MYB83<-------MYC3<------ ----ORA47(1)<---------YAB1        --------->MYB59--------->YAB1      <------MYB46(1)        --------   ggttaatttactattaagattaatcggaaactctagttagatcacgagataatcatcacgtggagaaacatttggttcttgtcacgtggagaaaacgtta  6850000  Previous    Next  AGI:  At3g19710.1    Description:  BCAT4 (BRANCHED-CHAIN AMINOTRANSFERASE4); catalytic/ methionine-oxo-acid transaminase. Identical to Probable branched-chain-amino-acid aminotransferase 4 (BCAT4) [Arabidopsis Thaliana] (GB:Q9LE06); similar to branched-chain amino acid aminotransferase 6 / branched-chain amino acid transaminase 6 (BCAT6) [Arabidopsis thaliana] (TAIR:AT1G50110.1); similar to branched-chain amino acid aminotransferase [Capsicum annuum] (GB:AAK57535.1); contains InterPro domain Aminotransferase, class IV; (InterPro:IPR001544); contains InterPro domain Branched-chain amino acid aminotransferase II; (InterPro:IPR005786) Range:  from: 6846975    to: 6849503    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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