Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  --------->ANAC46                --------->ATHB12       --------->ANAC58                                          <---         <---------AHL20(2)            --------->ANAC46                                         <----     <------ZmHOX2a(1)                 --------->ANAC58                         --------->ANAC58<----     ----------->GT1                <---------WRKY12                            --------->ANAC58<----    ----------->GT1              ------->GAMYB<-----------GT1                   ----------->GT1------    --------->ICU4<---------WOX13(1)<---------WRKY38(1)                --------->ZAT6     <---------HSFC1(2) ---------->DOF2<---------MYB46(3)<-----------HVH21                 <---------AHL20(2)    --------->HSFC1(2) -------TOE2(3)<---------YAB1  <---------At4g35610                 <---------AHL20(2)  ---------->DOF2 -DOF2  --------->AHL20(2)     --------->At4g35610                 --------->AHL20(2) --------->YAB1<   aatgaaaggattaaatggtgattgaagaaattcaactgtcaacgcattatacatcatcaacaaggcgaatttaatactagagaggcaataaaagcttccg  6671100                                    ------->TEIL                                    <---------ARR14(2)                                    --------->ARR14(2)                                    <---------ARR11(1) ------MYB52(1)         <---------ANAC58          --------->ANAC58 -------HVH21           <---------ANAC58          --------->ANAC58     ---------->DOF2 -----RAP2.6(3)--------->YAB1      <---------CCA1(2)              --------->ARR14(2)            <---- -------TGA1   <---------ICU4    <---------ANAC55(2)              --------->GLK1(2)         <-------- --->ANAC55(2)<---------ATHB51   --------->ANAC55(2)          >>>>>>>>>TBF1                 --------- ---------YAB1--------->ICU4---------->DOF2   <------ZmHOX2a(1)   <---------ARR14(2)    --------->WOX13(1)   tcatgaattcgaagaaataatgacttacttgaaagacgtatctatcgaggacaagcctcaagaagaagaatccgaaagcgaaatagacagcaatctggaa  6671200                                        --------->bZIP60(2)                                        <---------O2                                        <---------ANAC46                                       <------NtERF2                                       ------>NtERF2                                       --------->LBD16                                      --------->DEAR3(1)                                     --------->ATERF1(1)                                    <---------ATERF1(1)                                    ------>NtERF2                                   --------->ANAC46                                   --------->DEAR3(1)                                  --------->ATERF1(1)                                  <---------LBD16                                 <---------ATERF1(1)                              ----------->RAV1(1)                               <---------GLK1(1)                                 <---------ETT(1)                               --------->GLK1(1)                                 --------->ANAC46                               --------->ATERF1(1)                               ----------->HVH21---   <---------ALFIN1       <---------ANAC46   <---------YAB1                      ------->GAMYB    <-- -----GLK1(1)          ----------->HVH21--------->O2                        <---------ATHB12      --- -HSFB2a(2)          <-----------GT1--------->LBD16                       --------->GLK1(1)  -------- >HSFB2a(2) ----------->HVH21 <---------ATERF1(1)            <---------ARR11(3)--------->At4g35610<--   atgccagacctccatcgacggttttacgacggggtctccgccgcgtgatgataccgattccatgattttcactgagaaatcatccgacagaagaatcaaa  6671300                                                                  <---------ANAC58                                                                  <---------ANAC46                                                                  <---------ANAC58                                                                  <---------ANAC55(1)                                                              <---------ANAC58                                                              <---------ANAC58                                                             <------MYB83                                                             <---------MYB46(3)                                                             <------MYB46(1)                                                            --------->MYB59     --------->LBD16            --------->LBD16          --------->GLK1(2)     ------>ZmHOX2a(1)          ----------->GT1          --------->ARR14(2)    <---------LBD16            <---------HSFB2a(2)   ------>NtERF2--------->ANAC55(2) ------>ARR11(3)               --------->HSFB2a(2)   --------->LBD16               <---------------AGL15 -------ARR11(3)               --------->ANAC46     --------->DEAR3(1)          --------->GLK1(2) ------>GLK1(2)       ----------->RAV1(2)        ------->GAMYB<-------GAMYB    <---------GLK1(2) ->YAB1      >>>>>>>>>TBF1    <---------LBD16    --------->ANAC46 <---------ANAC55(2)   <---------LBD16 ---------ARR10    --------->MYB46(3)  --------->AHL20(2)<---------ARR14(2) ------>ZmHOX2a(2)       -   aatcttcctggagaagaagaaaccacctgttctccggaaaaaaaaattcaaacgccgagaatttggttgcgtaatcgatcggaatctatttggggaagag  6671400             <-------MYC2             <-------MYC4             ------->PIF5             <-------MYC3             ------->MYC3             <-------PIF5             ------->MYC2                                                                   <--------            --------->ANAC58                                                    ----------->HVH21            --------->ANAC58          --------->At4g35610                      ------>ZmHOX2a(2)    <-------TEIL                    <-----------RAV1(2)                       <---------GLK1(1)   --------->GLK1(2)              ----------->RAV1(1)                         <---------At4g35610   --------->ARR14(1)            ----------->HVH21                            --------->At4g35610   --------->CCA1(2)        <---------MYB52(1)                                --------->GLK1(1)  --------->ARR11(1)        <-----------HVH21            <---------ANAC58     <------ZmHOX2a(2)  --------->ARR14(2)       --------->LBD16               <---------ANAC58    --------->ARR11(3)  <---  <---------GLK1(2)      <---------LBD16             --------->DAG2          <---------ARR11(3) <----  <---------ARR14(2)    ------>ZmHOX2a(1)      ----------->GT1       <---------YAB1   <---------ARR11(3) ---------->ARR10<---------YAB1 --------->At4g35610 ---------->DOF2--------->YAB1     --------->ARR11(3)   aagagattcggagcacgttctaattcctccggtgagcgacagatggaaattgcaaaaagccttgcgaaattgtaattgggatctcacagaccttctttct  6671500                                                                                          <---------YAB1                                                                                         <---------AHL20(2)                                                                                       <---------YAB1                                                                                     <---------AHL20(2)                                                                                    <---------AHL20(2)                                                                                    --------->AHL20(2)                                         <---------ETT(2)                    --------->AHL20(2)                                       <---------ARR14(2)                    --------->ICU4             <---------WOX13(1)     <---------ANAC58               --------->ICU4--------->AHL20(2)            >>>>>>>>>ARR2           <---------ANAC46             <---------ICU4  --------->ATHB51      <---------DAG2                --------->ANAC55(2)          --------->ATHB51<---------AHL20(2)      <----------DOF2     ------->TEIL --------->ARR14(2)        <--------HAHB4  <---------ICU4  ---------->ID1       --------->ANAC55(2)      ---------->DOF2 <---------YAB1  --------->ICU4 <-----------GT1       <---------ANAC55(2)   ----------->RAV1(1)--------->ICU4--------->YAB1 --DOF2   <---------YAB1 *TSS       <---------ANAC58          --------->YAB1 <---------AHL20(2) ---------------------ANAC81        <---------ANAC55(2)      ------>ZmHOX2a(1)<---------ICU4 ------DOF2--------->ATHB12        <-----------------------TaNAC69(2)     <---------ZAT6 <---------AHL20(1)   ttttttctctttttgattgtttattatgtattttagtttcgtatcgacaacaaagaacaactcctcataattactagtattaattatttattatttttta  6671600                                                                                           <---------YAB1                                                                                           <---------AHL20(2)                                                                                      <---------ICU4                                                                                      --------->AHL20(2)                                                                                      <---------AHL20(2)                                                             <-----------GT1          --------->ATHB51                                                         <---------AHL20(2)          --------->ICU4                                                         --------->AHL20(2)        <---------ICU4                                                     <----------DOF2               --------->YAB1                                                     <---------DAG2               --------->AHL20(2)                                                    <---------ANAC58              --------->ICU4                                      <------------------------ANAC81             <---------AHL20(2)                                     <------------------------ANAC81           <---------ZAT6                                   <----------DOF2  <---------ANAC58     --------->ANAC46 <---------AHL20(2)         <---------ARR14(2) <----------DOF2       <-----------GT1        --------->ZAT6 <---------YAB1   aaaatacagtgtatatgaagaagtctctctctttcttcttttttttttttttttgctttttaattactctcattcacactagtattaattatttttattg  6671700                               <---------YAB1                              <---------ARR11(3)                         <----------DOF2        -----                              --------->ARR11(3)                      --------->ZAT6           ------                     ---------->DOF2                                <-----------GT1            <-----               --------->AHL20(2)                                <---------ICU4                ------               <---------AHL20(2)                                --------->YAB1           <------ZmHOX2a(1)              --------->AHL20(2)        --------->MYB52(1)      --------->ICU4          <---------TOE2(3)             <---------YAB1  --------->YAB1  --------->ALFIN1   <---------YAB1          <---------TOE1(3)       ----------->GT1--------->DAG2 <------ZmHOX2a(1)     ----------->GT1            --------->CCA1(2)   tttaaaatacagtttattaaaaaaaaagcgaagataataggataacagtggaggtaaatgagagtaattataacactttggctgtaagataaggattcct  6671800                                                    <---------ARR11(3)                                                   --------->YAB1                                                  <---------YAB1         ---------->DOF2                          --------->ICU4        --------->AtMYB61                       --------->YAB1 <----------DOF2                                <---------ICU4 --------->TOE1(3)    <------ZmHOX2a(1)        <---------ATHB12 --------->TOE2(3)  --------->ALFIN1           --------->ICU4                    <----------DOF2 ->ZmHOX2a(1)      <------ZmHOX2a(1)      --------->ANAC58                      <---------DAG2 --->TOE2(3)     --------->ALFIN1         --------->ANAC46           --------->AHL20(2) ----ANAC55(2)  <------ZmHOX2a(1)         --------->ANAC58      <---------MYB52(1) --->TOE1(3) <-----------RAV1(2)      --------->YAB1--------->ARR11(3)<-----------GT1   taactttaaaccaaagcaggaggaggagcatgatgcccaagtataagcaatgatgatcatgttccccttaattaacttccagccttttgttaacattcta  6671900                                                    <---------DAG2                                      ------->GAMYB <----------DOF2                           -------                                     --------->ANAC58                                       <--------                        <----------DOF2            <---------ANAC58                       --------->ATHB12                       <---------ICU4--------->ANAC46       <---------MYB52(1)       ---------->DOF2       <---------AHL20(2)            --------->ANAC58      <-------GAMYB       ------>ZmHOX2a(1)       --------->AHL20(2)   <---------YAB1         <---------ANAC58           --------->TOE2(3)   agtttatatttattttgtatgttaatctttatgttaacaacgcaagtggtatggctttttccgttgtttcaatatgtcttcctcattcaaagtcattgac  6672000  Previous    Next  AGI:  At3g19260.1    Description:  LAG1 HOMOLOG 2 (LONGEVITY ASSURANCE GENE1 HOMOLOG 2). Identical to LAG1 longevity assurance homolog 2 (LAG2) [Arabidopsis Thaliana] (GB:Q9LJK3;GB:Q9M6A2); similar to LAG13 (LAG1 LONGEVITY ASSURANCE HOMOLOG 3) [Arabidopsis thaliana] (TAIR:AT1G13580.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO47815.1); contains InterPro domain TRAM, LAG1 and CLN8 homology; (InterPro:IPR006634); contains InterPro domain Longevity assurance proteins LAG1/LAC1; (InterPro:IPR016439); contains InterPro domain Longevity-assurance protein (LAG1); (InterPro:IPR005547) Range:  from: 6669152    to: 6671525    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version