Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   --------->LBD16                                                                <---------HSFB2a(2)                                                                --------->HSFB2a(2)                                                               --------->LBD16                                                              ----------->RAV1(1)                                                          --------->ARR14(2)                    <----                                                          <---------ARR14(2)                <--------                                                         <---------GLK1(1)         --------->At4g35610 -------->ANAC58              ---------->DOF2        ----------->GT1     --------->DAG2   --------->MYB52(1) -------->ANAC58       --------->GLK1(2)           ----------->GT1      ---------->DOF2   ---------->DOF2   agaagcaagaagatggattgtggaaattctgccaaagcgatattcaaatacagaagtgaaaatcccccagaaaaaaaagctcatcatctaactaaaggtt  6637000                                                                ---------->DOF2                                                          <---------REM1(1)                                                     ------>MYB83                                                     ------>MYB46(1)                                                     --------->MYB52(1)                                                    --------->MYB55(1)                                                    ----------->HVH21                                <---------DOF5.7(2)<---------MYB111(1)                                --------->MYB52(1) <---------MYB59                               ----------->HVH21   <---------MYB46(2)          ---------->ID1                              <---------MYB52(2)   <---------MYB52(2)   <---------TOE1(2)       --------->ZAT6        --------->At4g35610  ----------------->AGL1<---------TOE2(2)  ------>ZmHOX2a(1)     ----------->RAV1(1)     <---------At4g35610  --------->ANAC55(2)  <-----------RAV1(2)--------->TOE2(3) -----REM1(1)         <------ZmHOX2a(2)         <-----------GT1<------ZmHOX2a(1)   <----------DOF2  - -TOE2(3)       --------->TOE1(2)     <---------MYB46(3)  --------->ALFIN1   --------->MYB52(2)    --   gtagcatcaacagtagaacatgggatcatttagctaacggttgttcttgtttacctaacggtgtaggaaagtctcaggtttgtttctttattccttagta  6637100                                                                                      ---------->DOF2                                                                                  <---------YAB1                                                                                --------->ATHB51                                                                               <---------YAB1                     --------->GLK1(2)                                       <---------ICU4      <---------ARR14(2)                                                     --------->YAB1      --------->ARR14(2)   <---------YAB1                                   <---------YAB1     <------ZmHOX2a(1)  <----------DOF2                                  <---------YAB1 ---------->RAV1(1) <---------GLK1(2)                                    <---------AHL20(2) ----->GAMYB <----------DOF2                <---------TOE2(3)        <---------AHL20(2)   acccacaggatttgtctttgtagattcttttgatttcaatgtgtttatggataaacaaacttcttgagtattttttttattattattgtaaagcgttact  6637200                                                   <--------ATHB1                                                   --------->ATHB51                                                   <---------ICU4                                                   -------->HAHB4                                                  --------->AHL20(2)                                                  <---------AHL20(2)                                                  <---------ATHB51                                                  <---------YAB1                                                  --------->ICU4                               <---------AHL20(1)--------->AHL20(2)                               --------->AHL20(1)<---------AHL20(1) ----------->GT1                       ----------->GT1     ------>ZmHOX2a(2)      <---------ANAC46                  --------->AHL20(2)      --------->GLK1(1)  <---------ICU4                <---------------AGL15     <------ZmHOX2a(2)  -------->HAHB4                --------------->AGL15    --------->ARR11(3) <---------ATHB51               --------->TOE2(3)     <---------TOE2(3)----------->GT1                 <----------DOF2            <XXXXXXXXXXXXXXXXXXXXMIR830  <---------ARR11(3) --------->ICU4 ---------->DOF2          <   gatcaaatcaaatgttttcttaaaatagttaaaaatattaagggatctcaaaataattgttaattatggagggaaaaaaaagaaacgtcttttaagaagc  6637300                                                                                               <-----                                                                                              -------                                                                                              <------                                                                                              <------              ------->TEIL                                                                  <--------           --------->ANAC58                                                            <--------ATHB1           --------->ANAC58                                                            <---------ICU4           <---------ANAC55(2)                                                         --------->ATHB12           --------->ANAC55(1)          >>>>>>>>>>>>>>>>>LFY                           --------->YAB1           --------->ANAC55(2)          ------>MYB46(1)                               <---------ATHB12           --------->ANAC46             ------>MYB83                                  --------->ICU4       <-----------HVH21            <---------ARR11(3)                                <---------YAB1       <----------DOF2     <---------ANAC58                                       ------------>CBF<-- --------->ARR14(2)        <---------ANAC58          --------->GLK1(2)    --------->ATHB12  <-------- ---------ALFIN1  <---------YAB1    --------->ARR11(3)         ------------>CBF  --------->ANAC46 <--   ccatacctgcttcacgtatcacgatggaggcttactcagaccttccactgttgagaatttgaaatttcaatttgtttgattagacacaatgattaagatt  6637400                                                                           --------->ANAC58    <---------ANAC55(2)                                                    --------->ANAC58    <---------------AGL15                                              <-----------HVH21 ----RVE1(1)          <------------CBF                             --------->MYB52(1) -->ARR11(3)        --------->AHL20(1)                             ------>MYB46(1) ---ARR11(3)        --------->AHL20(2)                          --------->ANAC58                  --- ---GLK1(2)<----------ID1                           ----------->HVH21  --------->At5g28300        --- -TOE2(3)  ----------->GT1                         --------->At5g28300------->GAMYB               --- -------AHL20(2)    <---------AHL20(2)           *TSS ---------->DOF2--------->MYB46(3)          ---- -YAB1   ---------->DOF2      ----------->GT1  --------->MYB52(1)  ------>MYB83---------->DOF2 ------ -------YAB1       --------->AHL20(2)      <-------TEIL         --------->ANAC58    --------->ZAT18   tttattacataaaaagaaaaaaaaaattggagaagtataaacacatacatagcggtgaaagaagaaacccaacggtcactcaaaagcgcattgaagagtc  6637500            ------>ZmHOX2a(2)           <---------At4g35610          <---------ARR14(2)          --------->ARR14(2)                     ------>ZmHOX2a(1)         --------->ANAC58          <---------AGP1                        --------->TOE1(2)          --------->ANAC58         <---------CCA1(2)                   --------->GLK1(1)         --------->At4g35610 ------>ANAC58                              --------->ARR14(2)         <---------ZAT2    <-------TEIL ------>ANAC58                              <---------ARR14(2)         <---------At4g35610 ------>AtLEC2        <---------ANAC58      <---------GLK1(2)          --------->ZAT2  <---------GLK1(2) ----->WOX13(1)       <---------ANAC58   <---------ANAC46             <-----------ARR10<---------ARR14(2) --->WRKY18(1)     <----------DOF2      <---------LBD16         <---------ARR14(2)     --------->ARR14(2)   aagcaagacttggatctgtctctttcgtttctctatctctgtttcggattcctaagagaaatggtggaatcggagctaagctatgaacagattcgtttga  6637600                                               <---------ANAC58                                               <---------ANAC58              <<<<<<<<<TBF1   --------                                      --------->TOE2(3)                   <<<<<<<<<TBF1      --------          <----------ID1       --------->At4g35610                <---------CCA1(2)   <<<<<<<<<TBF1   --------->ALFIN1            <---------At4g35610            <---------ANAC58     <<<<<<<<<TBF1  --- <---------ANAC46       --------->ALFIN1      --------->ZAT2  <---------ANAC58  <<<<<<<<<TBF1--------   atagggtggaagagaacaagaagagaatgggggagcttaatctcaacaagcttgctcaatctcttcgtgtctcttcttcttcttcttcttcttccaagcc  6637700                                                                                       --------->ANAC58                                                                              <---------REM1(1)   --------->ANAC46                                              <---------AHL20(2)    --------->ANAC58 ->ANAC58                                   <----------DOF2     <---------AHL20(2)   ---------->DOF2 ->ANAC46                              <----------DOF2          --------->AHL20(2)--------->ANAC58 -------->HVH21              <------------------------ANAC81    <---------AHL20(1)--------->ANAC58 ->ANAC58      <----------DOF2  <---------CCA1(2)        <-----------GT1<---------TOE2(3)           <   ctcaccagtaacgtttcctttctcttctcttctcatttcttcttttctttttctgaaattaaccaattttttttatggaaatgtaggcaaagccaagaac  6637800               <---------GLK1(1)   ---------->DOF2    --------->ARR14(2)           --------->ARR11(3)    <---------ARR14(2)        <------ZmHOX2a(1) <---------ANAC55(1)         <---------At4g35610 <---------ANAC58  <---------HSFB2a(2)  <---------ANAC58 --------->ANAC55(2)       <-----------RAV1(2)                                            <---------- <---------ANAC55(2)     <-----------HVH21    ---------->DOF2               <----------DOF2 <---------ANAC46  --------->HSFB2a(2)  <---------ANAC58--------->AtMYB61<---------ARR11(3)      <--- <---------ANAC58  <---------LBD16<------ZmHOX2a(2)  <---------ALFIN1    --------->ARR11(3)  <------- -------TEIL   --------->GLK1(1)--------->GLK1(1)   <-------TEIL   ---------->DOF2<-----------GT1<---   gatgcgtattccagtggatttctcggaggtcaggagatcaagccgtgccaaaggtccacctccaagttataaagaggtcttttactaccatttatcttta  6637900  Previous    Next  AGI:  At3g19180.1    Description:  ARC6H. similar to ARC6 (ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6) [Arabidopsis thaliana] (TAIR:AT5G42480.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48483.1); similar to H0103C06.10 [Oryza sativa (indica cultivar-group)] (GB:CAJ86106.1) Range:  from: 6632682    to: 6637230    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g19184.1    Description:  DNA binding. similar to transcriptional factor B3 family protein [Arabidopsis thaliana] (TAIR:AT5G42700.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47792.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340) Range:  from: 6637449    to: 6639284    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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