Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            --------->AHL20(1)                                          --------->ARR11(3)                               <---------ICU4                              --------->ICU4                              <---------YAB1                            --------->YAB1<---------ARR11(3)  <---------ARR11(3)                           <---------AHL20(2)           <-----------GT1                    <---------ARR11(3)         <-----------GT1  <---------AHL20(2)     <---------ARR11(3)                        --------->ARR14(2) ----------RAV1(1)        --------->AHL20(2)     --------->ARR11(3)                        --------->GLK1(2) ------->ALFIN1           <---------AHL20(1)    <---------CCA1(2)                          <--------- ------ANAC58             --------->AHL20(1)--------->TOE2(3) --------->ARR11(3)     <-----------GT1 ------ANAC46          --------->AHL20(2)--------->CCA1(1)  <---------YAB1       --------->ICU4 ------ANAC58    ------>ZmHOX2a(1)       --------->RVE1(1)--------->YAB1      ---------->DOF2       -   agtgttgcaatttgctatcctccaaaaatataatgactacaaaatatcttaaatcttttttcatgatattaaacttaagtgaaagtattacaaaatctga  6632300                                                                                     --------->AHL20(2)                                                                                     <---------AHL20(2)                                                                                 <---------AHL20(2)                           <----------DOF2                                       --------->AHL20(2)             <-----------GT1                 ----------->GT1                    --------->AHL20(2) --ARR10     --------->ANAC46          <---------AHL20(2)            <---------AHL20(2) ---------->GT1--------->ANAC46 --------->LBD16       --------->YAB1 --------->AHL20(2)   tcaagttaaaagtttacaccagacatatactttccaggtatttgattcagaaaaaatcatattgatcagatttaaacaaattttaaattatatataagtt  6632400                                                         <---------ANAC58                   --------->TOE2(3)                     <---------ANAC58                <-----------GT1                     <----------CDC5              --------->AHL20(2)              <---------ANAC58       --------->ANAC58                       <---------ANAC58       --------->ANAC58                    <--------P   --------->ZAT2                           <---       --------->ANAC46   <---------ICU4<---------ZAT6  --------->At4g35610                  <------NtERF2   ttttcttacacacaaattaaacctttgatcagtactagactactggtagcatgcgatgagcttgcagtagtttctctcgcacattagttatgggccgaga  6632500                                                            --------->bZIP60(1)                                                            <---------bZIP60(1)                                                            <---------ANAC46 <-----------HVH21                                                            --------->ANAC55(2)                                                            <---------ANAC58--------->ANAC58                                                            <---------ANAC55(1)                                                            <---------ANAC55(2)                                                            <---------ANAC58--------->O2                                                         --------->ALFIN1   --------->ANAC58                                                        <-------MYC3        --------->bZIP60(2)                                                        ------->MYC2 <-------MYC3                                                        <-------PIF5 ------->MYC3                                                        ------->PIF5--------->TGA1a                                                        ------->MYC4<---------TGA1a                                                        <-------MYC4<---------O2 --------->O2                                                        <-------MYC2--------->bZIP60(1)                                                        ------->MYC3<---------bZIP60(1)                                                       --------->PIF3(3)    <---------O2                                                       >>>>>>>>>>HY5--------->ANAC46                                                       =======================bZIP_bZIP                                                       <---------PIF3(3)    --------->TGA1a                                                       --------->TGA1a      <---------TGA1a                                                       --------->O2 <---------bZIP60(2)                                                  <-----------GT1   <---------ANAC55(2)                      --------->AHL20(2)        <---------YAB1      --------->O2 <---------O2                   ----------->GT1          ==================================bZIP_DOF<---------ANAC46                  ----------->GT1           ==========================================bZIP_DOF                 <---------ANAC46           =====================bZIP_DOF   =========================              ----------->HVH21             <----------DOF2<------NtERF2    --------->ANAC46       <-            --------->LBD16          <---------ARR11(3)<---------TGA1a----------->HVH21          <---        <-----------HVH21         <---------HSFB2a(2)  <---------O2 --------->ANAC55(2)          <--- ------ZAT2<---------LBD16        --------->HSFB2a(2)  --------->ANAC46   <---------ALFIN1      -----   gctaggcccatgtccagggacggataaaataatcttccagatgtttctttattatccacgtggcgtgatcacgtgaccacgtctcgtctcgtctagtcct  6632600                                 --------->TOE2(3)                        <---------At4g35610                        <---------ZAT2                        <------NtERF2  <-----------GT1                      <---------WRKY12 >>>>>>>>>>GATA-1          ---------->DOF2       --------->ARR14(2)        <---------MYB59             <---------------AGL15       <---------ARR14(2)   <-------GAMYB                   --------->HSFB2a(2)   --------->At4g35610--------->ATERF1(2) <-----------HVH21 <-----------------AGL1 =========================bZIP_DOF   <---------YAB1--------->ANAC58 --------GLK1(2)      <-----------RAV1(2) <-----------TGA1  <---------HSFB2a(2)   *TSS ------TOE1(2)        <---------ATERF1(2)--------->YAB1  <----------DOF2  --------->YAB1    --------- ------TOE2(2)      ------>NtERF2<---------DAG2    --------->ANAC58 ----------->GT1<<<<<<<<<WRKY18 ->ZmHOX2a(1)  <----------DOF2   --------->TOE1(3) --------->ANAC46--------->DAG2<-----------HVH21   agattagcagagcctctctttcggccagcgggttaccttattatcgtcacaagacgaaactttcagaaaaaggcaaaaatcactgtcaaaactcaaaagc  6632700                                                                                                 ----                                                                                                <----                                                                                          --------->MYB52(2)                                                             --------->ZAT2              <---------TOE1(2)                                                             --------->At4g35610        <---------MYB52(1)        <<<<<<<<<CBP60g           --------->GLK1(1)          <---------At4g35610      <---------MYB46(3)        <<<<<<<<<SARD1            <---------GLK1(1)   <---------ICU4                  <---------ANAC58       ------>MYB46(1)    ------>ZmHOX2a(1)          <---------YAB1--------->ZAT6     <---------ANAC58     <---------MYB59      --------->At4g35610        --------->ICU4--------->ANAC46   --------->MYB52(2) ->DOF2------>MYB83 <-----------GT1    ----------->RAV1(1)   <---------ZAT2          <-------TEIL<---   cttgagaccaaatttccgattttttctcctctgaagaaatccaacaaattgtaccatgattccagcttcactctacttcttctagggttcgttcgttttc  6632800        --------->ANAC58        --------->ANAC58                                                                    <--------        --------->ANAC55(2)                                                             <-------TEIL        <---------ANAC55(2)                                                           <---------GLK1(2)        <---------ANAC46                                                       <---------At4g35610       <---------LBD16                                            --------->ARR14(2) <---------ZAT2   <---------MYB46(3)                                            <---------ARR14(2)  --------->ZAT2   <-----------RAV1(1)               <---------ARR14(2)          <---------GLK1(2)   --------->At4g35610 <---------At4g35610                 --------->ARR14(2)          --------->ARR14(2)<---------ALFIN1== --------->At4g35610          --------->GLK1(1)                --------->LBD16 --------->At4g35610 -- ----->HSFB2a(2)      <---------ANAC58                        --------->ANAC55(2)----------->RAV1(1) -----LBD16           <---------ANAC58                       <---------LBD16   <---------ZAT2    <--- ------HSFB2a(2)     --------->At4g35610                  <----------DOF2      --------->ZAT2    ----   tggagctgttgcgcaatgccagtagcttacacatttccagttctcccttcttcttgtctgctttgcggaatctccaatcgcagcaccagcttcgtcgtag  6632900                ==================HOX2a_HOX2a               <---------GLK1(1)               --------->GLK1(1)              <---------AGP1              --------->ARR11(3)              --------->AGP1                                                       <---------ARR14(2)              --------->ARR14(2)                                                  <-------GAMYB              <-----------ARR10                                                  <---------DEAR3(2)              <---------ARR14(2)                                                 <---------MYB46(3)              <---------ARR11(3)                                                <---------DEAR3(1)             <---------At4g35610                                                <---------ANAC46       <---------At4g35610                                                    <---------RAP2.3(1)       --------->ZAT2                                                         <---------RRTF1(1)       --------->At4g35610                                                   <---------RRTF1(3)      <---------ARR14(2)           <---------MYB46(3)                        <---------RAP2.6(2)      --------->ARR14(2)           --------->MYB52(2)                        <---------RRTF1(2)    --------->LBD16        ------>ZmHOX2a(1)                                 <---------DEAR3(1)   --------->ANAC46   --------->GLK1(1)    <---------ARR14(2)                <---------RAP2.3(2)  <---------LBD16  <---------TOE1(2)       --------->ARR14(2)                <---------RAP2.3(3) -ANAC46     <---------CCA1(2)    <---------TOE1(2)                         <---------LBD16 =================================HOX2a_HOX2a  ----------->GT1           <----------DOF2 ---->ZmHOX2a(2)------>ZmHOX2a(2)<---------MYB52(1)          <---------ARR14(2)------>NtERF2 ------ARR14(2)<------ZmHOX2a(2)<---------SPL7 --------->LBD16         <---------YAB1 ----->ARR14(2)===================HOX2a_HOX2a<---------LBD16 --------->ARR14(2)<------NtERF2    <----   atcgcccggagcttcagatctcaggtctcctcgtcgttcgttctgaatccggtgaattcttcggttctggtttatctttgcggcggtttcagcgagaagg  6633000                                                      --------------->AtSPL8                                                  --------->RAP2.3(2)                                                  --------->DEAR3(1)                                                  --------->RAP2.3(3)                                                 --------->ATERF1(1)                                                 --------->RAP2.3(1)                  <-----------RAV1(1)            --------->ORA47(2)                 <---------ANAC46                <------NtERF2                <---------At4g35610    --------->ETT(2)            <-----------RAV1(1)     <---------ANAC46  --------------->AtSPL3      <-------GAMYB        --------->GLK1(1)     --------->DEAR4(2)                                 <     ----------->GT1  <---------MYB46(3)        <---------RAP2.3(1)              --------->ZAT6    --     <---------MYB46(3) <---------AtMYB61  ---------->DOF2                     ------->TEIL       ---    <---------AtMYB61--------->ALFIN1  <---------ETT(2)                        -------->P        <---   <------ZmHOX2a(1) <---------AtMYB61<------NtERF2<-----------HVH21        <---------At4g35610 ----- --ZmHOX2a(1)   <---------ZAT2    <-----------HVH21------>NtERF2           ------->TEIL      <-------   acggaggaggttgaatgctgctggtggtggtatccatgtcgtcgacaatgcgccgtctcgtacttcttctctcgctgcatctacctctacaatcgaactc  6633100         <-----------GT1    <---------ANAC55(1)    <---------bZIP60(2)    --------->ANAC55(2)    <---------ANAC58    <---------ANAC46    <---------ANAC58    <---------ANAC55(2) <---------MYB52(1) --------->ARR14(2) <---------ARR14(2) -----------HVH21                             --------->GLK1(2) ------->LBD16                               <---------GLK1(2) ------>LBD16                                --------->ARR14(2) ------LBD16                          <---------DAG2                                       ------>ZmHOX2a(1) ---->MYB52(1)             ------>NtERF2 <---------LBD16--------->ARR14(2)            <---------At4g35610 --GLK1(1)      <---------RVE1(1)     <----------DOF2   <---------ARR14(2)--------->ARR14(2)   ccggttacgtgttaccaggtattttgctccgactgacttacttttcggaatctctgtagatactactatctctcgcgatttgctacttagctcctcgttg  6633200  Previous    Next  AGI:  At3g19180.1    Description:  ARC6H. similar to ARC6 (ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6) [Arabidopsis thaliana] (TAIR:AT5G42480.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48483.1); similar to H0103C06.10 [Oryza sativa (indica cultivar-group)] (GB:CAJ86106.1) Range:  from: 6632682    to: 6637230    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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