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AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                  <---------ARR14(2)
          ------>MYB46(1)
          ------>MYB83                                                                      <-------
        ============================================================================================
        --------------->AGL15                                  <---------ANAC46             --------
        <---------------AGL15                     <----------DOF2                          ---------
        <---------MYB59                      --------->At4g35610                           ---------
       ----------------->AGL1                <---------At4g35610<----------DOF2            ---------
     <---------WRKY18(1)                     <---------ZAT2    <---------ANAC58<---------ANAC58
  <------ZmHOX2a(1)  --------->ZAT6     <----------DOF2        <---------ANAC58<---------ANAC58
-------->YAB1     --------->ARR14(2) --------->ANAC58    <---------MYB46(3)    <---------ANAC46
---------LBD16   <------ZmHOX2a(1)   --------->ANAC58  <-------GAMYB  --------->ZAT6       ---------
 
tatcaggatgaccaaatcgaggaaacactagtaaatgagcaagctttgagctgctttcggttgatggctttgaacagtaatggcctatgagtttgccaaa  6545000
       <---------ICU4
       --------->YAB1
      <---------YAB1
    --------->YAB1                               <---------ANAC58
--------AGL15                                    <---------ANAC58
========MADS_MADS                           <---------ANAC58
------->AGL15                               <---------ANAC58             <-------GAMYB     ---------
-------->AGL3                           <---------GLK1(1)               <-----------RAV1(1)---------
-------->AGL2                          --------->ARR14(2)           <---------ARR14(2)     <--------
-------->AGL1       --------->YAB1     <---------ARR14(2) <---------TOE2(3)         <------ZmHOX2a(1)
-------->AG   <------NtERF2       <---------AtLEC2        <---------TOE1(3)        <----------ID1
 
tagagaattatcatggcagccattgatgactaattgagcatggatttgcttagcttgaattagggttttcgaattctgttgcaacaaggacaaaaatctt  6545100
                           ------>MYB83
                           ------>MYB46(1)
                         <---------MYB46(2)
                         <---------MYB111(2)
                         <---------MYB59
                         --------->MYB46(3)
     XXXXXXXXXXXXXXXXXXXX>MIR164C
 --------->HSFB2a(2)     <---------MYB111(1)
 --------->LBD16         --------->AtMYB61
 ------>ZmHOX2a(1)      --------->ANAC58
 <---------HSFB2a(2)    --------->ANAC58
<---------LBD16     --------->ANAC58                           <------ZmHOX2a(1)        <---------AHL20(2)
>ARR11(3)           --------->ANAC58                          ----------->GT1       --------->AHL20(2)
>GLK1(2)           <---------ICU4                     ---------->DOF2            ----------->GT1
-ARR11(3)    <---------At4g35610                  <---------TOE2(3)    ---------->DOF2  --------->AHL20(2)
 
ggtcctggaaaaacagagctcataagcaccaaactctgatactgtaatggattaaggcaaagagaaggagaaacaaaagctaagagataaaataaatatc  6545200
                                      <---------ICU4
                                     <---------YAB1
                                     --------->ICU4
                                   <---------ICU4
                                   --------->YAB1
                                  <---------YAB1
                                --------->YAB1
                                <---------ICU4
                               --------->ICU4
                             <---------ICU4                                  <-----------GT1
                             --------->YAB1            ------>MYB46(1) <---------ANAC55(2)
                            <---------YAB1             ------>MYB83    <------MYB83
                            --------->ICU4           <---------MYB59   <------MYB46(1)
                          --------->YAB1        --------->ANAC58       --------->ANAC55(2)
      --------->ANAC46    <---------ICU4        --------->ANAC58      --------->MYB59           ----
 --------->GLK1(2)       <---------YAB1         --------->ANAC46      --------->MYB111(1)       ----
 
gaagaatctacagcacaaacccatcttcatcataatcatcatcatggctacaagtaccaaatttgatggagattaggtatttacagacttcttcttaaac  6545300
                                          ----------->GT1
        <---------MYB46(3)          <---------ATHB12     ----------->GT1
  <----------DOF2                  --------->ANAC46     <---------TOE2(3)
----->TOE1(3)                      --------->ANAC58     <---------------AtSPL8          ---------->DOF2
----->TOE2(3)                      --------->ANAC58<---------AHL20(2)                --------->ZAT6-
 
cctaactttgtttgttctactcaaacaatttgagttccactcaagaggttatatataatgaggtaaaaacaacttatccacatcgataacacaaagtaaa  6545400
                                                                                  --------->ZAT14
                                                                                  <---------ZAT14
                                                                                 ------>ZmHOX2a(1)
                             <----------ID1                               <---------GLK1(2)
                             --------->ANAC46                             <---------ARR14(2)
                           --------->MYB52(1)                             --------->ARR14(2)
                           <---------ICU4                                 --------->ARR11(3)
                           --------->YAB1                                 <---------ARR11(3)
                          --------->ICU4                                <---------TOE2(3)
                     --------->ANAC58                                   <---------YAB1
                     --------->ANAC46                                   ----------->ARR10       <---
                     --------->ANAC58                             --------->AHL20(2)      <---------GLK1(1)
                    <-----------------------TaNAC69(2)            <---------AHL20(2)   --------->At5g28300
  ----------->GT1 ----------->HVH21                              --------->AHL20(2)   ----------->GT1
-------->LBD16    ----------->TGA1   *TSS                        <---------AHL20(2)<---------ALFIN1
 
cccgagagaaaaaacgagacactgacgcaataacgacacagaccagaagagagtttttttagttgtttttaaattaagatactcctacactgtaaatccc  6545500
                                                       ---------->DOF2
                                                      ------>ZmHOX2a(1)
                                                     --------->TOE2(3)
                                                  <---------ARR14(2)
                          --------->ARR14(2)      --------->ARR14(2)     ------->GAMYB            --
                          <---------ARR14(2)     <---------CCA1(2)      --------->MYB46(3)        --
            --------->STY1(2)                  --------->YAB1           <---------MYB52(2)        --
   <---------ZAT6   --------->ZAT6            <---------YAB1    --------->YAB1                  ----
-------DOF2 <---------STY1(2)               --------->YAB1      <---------ICU4                  <---
 
tttctagtgagagctagctactaccactggattcagtcttcaacaaattatcatatcctcaagcgcatcatcacaacaaacacttgtcatactagacaaa  6545600
                    <-----------HVH21            <---------DAG2
                  ------->MYC2                   <----------DOF2
                  <-------MYC2                <---------ALFIN1
                  <-------MYC3               <---------ZAT14
                  ------->MYC3               <---------ZAT18
                 <---------TGA1a             --------->ZAT14
                 <---------ANAC58          --------->ANAC58
                 --------->TGA1a           --------->ANAC58
                 <---------bZIP60(2)       --------->ANAC46
                 <---------O2            <---------ALFIN1                 <---------CCA1(2)
                 --------->O2           --------->ZAT14                  ------->TEIL
                 <---------ANAC55(2)    <---------ZAT18               <---------ANAC55(2)
                 --------->ANAC55(2)    <---------ZAT14               <---------ANAC58
                 <---------ANAC55(1)  --------->ANAC58           <---------ICU4
------->ANAC58   <---------ANAC46     --------->ANAC46           --------->ATHB12             ------
------->ANAC46   ===========================================bZIP_DOF  <---------ANAC58        <-----
------->ANAC58   <---------ANAC58     --------->ANAC58        --------->WOX13(1)              <-----
----->ZAT6    ----------->HVH21     <---------ALFIN1       <-----------HVH21             --------->YAB1
------ALFIN1 <-----------HVH21    ------>ZmHOX2a(1)       --------->bZIP60(2)         ------>ZmHOX2a(1)
 
cactccaataagcttctgtcacgtgtcccttatattcctccactccactccacttttgcccatgtcattcattgcgcatctctgttttcctataacaaat  6545700
               <----------DOF2
              <---------ICU4
           <---------GLK1(1)
   --------->ARR14(2)
   <---------ARR14(2)                                                                        <------NtERF2
 --------->LBD16                                                                            ------>NtERF2
--------->ANAC55(2)                                                                        <--------
<---------ANAC55(2) --------->TOE2(3)     ----------->GT1                                 --------->ATERF1(1)
--->ARR14(2)--------->ARR11(3)         <---------At4g35610                                <------NtERF2
------ARR10--------->GLK1(1)           --------->At4g35610                               <----------
----ARR14(2)<---------ARR11(3)       <-----------RAV1(2)               <---------ICU4   <---------REM1(1)
 
ctcccgtatttgagaaatctttacctcaaggtagtttgagacagatgataaaacatctaatttgctaatttcaaaaattacatggactatggtgtcgcct  6545800
                         --------->TOE1(3)
                         --------->TOE2(3)
                       ------->TEIL
                       -------->P                                                               <<<<
                <---------WOX13(1)                                                   --------->At4g35610
              --------->ATHB12                  <---------YAB1                       <---------At4g35610
-ANAC46     <----------DOF2             --------->LBD16                           <-------TEIL  <---
-HVH21 <---------At4g35610   ---------->DOF2 --------->ICU4                       ---------->DOF2
 
atgcgatgtctactgcttcattgatcaacctcaaaagctaatccgaaaattatgaacaaaattctaacaacatagaacagaaacatacagctctctctat  6545900
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AGI:  At3g18970.1   
Description:  pentatricopeptide (PPR) repeat-containing protein. similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G59200.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43067.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885)
Range:  from: 6543324    to: 6545438    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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