Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 <------ZmHOX2a(2)                              --------->ARR11(3)                              <---------ARR11(3)                              <---------ARR14(3)                            ----------->ARR10                          <------NtERF2                       --------->RAP2.3(1)                       --------->ATERF1(1)                       <------NtERF2                       --------->RRTF1(1)                      <---------RAP2.3(1)                      <---------DEAR4(2)                      <---------RRTF1(1)                      <---------RAP2.6(1)                      ------>NtERF2                      <---------ATERF1(1)                      <---------ERF1                      <---------ORA47(2)                      <---------DEAR3(2)                     <---------RRTF1(2)                     <---------RRTF1(3)                     <---------RAP2.3(2)                     --------->ATERF1(2)                     <---------ATERF1(2)                     <---------RAP2.3(3)                     --------->DEAR3(1)                    --------->ATERF1(1)                    <---------ABI4(1)                                               <---------ICU4                   <---------ATERF1(1)                                              --------->YAB1    <-----------HVH21<---------DEAR3(1)                                            <---------ATHB12 ---->MYB46(1)     ------>NtERF2                                             ----------->GT1 ---->MYB83        <---------RAP2.3(1)                                    --------->ARR14(2) ------>WOX13(1)   --------->LBD16------>ZmHOX2a(1)                       <---------ARR14(2) ----->AtMYB61   <---------LBD16------>ZmHOX2a(2)                   <---------ARR14(2) -->ORA47(1) <-------TEIL------>NtERF2         --------->ARR11(3)   --------->ARR14(2)<---------YAB1 --ETT(1)   <-----------ARR10 --------->ARR14(3)                    --------->GLK1(2)--------->TOE2(3) ->DEAR3(1) --------->ARR14(2)--------->ARR14(2)                   <---------GLK1(2)--------->ATHB12 >ORA47(2)  <---------ARR14(2)<---------ARR14(2)     <---------TOE2(3)  --------->LBD16         <----   caatccagtcagaggttcttccggcggcgcaagatcctataagtgaatagatgttgaggcttccagcgagaatcccgatttgtaaatcattaatcttcaa  6490900                           <---------ICU4                           --------->YAB1                          <---------ATHB12               <---------ICU4               --------->ATHB12               -------->ATHB1          <---------ARR11(3)               ---------->DOF2          <---------AHL20(2)           <---------ARR14(2)              <---------ATHB12          --------->AHL20(2)          <---------CCA1(2)       --------->YAB1                   ------      --------->AHL20(2) --------->ANAC46                 --------->AHL20(2)                   ------    <----------DOF2    <---------ALFIN1--------->ARR14(2)--------->AHL20(2)                   <------ -----CCA1(2) <---------ATHB12      ------>ZmHOX2a(1)   --------------->AGL15--------->GLK1(2)<------   atctctctttatataaatcattgctccactcatcactcctatatctgcaaaatatacacttaaattagaatcaataaagaatatgtgtgtgtgtatatta  6491000                              ---------->DOF2                           --------->LBD16                         <---------LBD16                       <---------WRKY18(1)                      ----------->HVH21                                                           ---                      --------->WRKY12                                                            ---                      --------->WRKY38(1)                                                         ---                      --------->WRKY45                              <------ZmHOX2a(1)          <----- --->ATHB51         <-------GAMYB                            --------->TOE1(2)          <---------YAB1 --->ATHB12        <---------ANAC58                          --------->TOE2(2)          <---------TOE2(3) ---AHL20(2)       <---------ANAC46                    --------->TOE2(3)            --------->At4g35610 ---YAB1           <---------ANAC58   <---------WRKY12 --------->TOE1(3)            <---------At4g35610   ttggtagagttttcattttttgcgttgaccggaaaagagttcaacgagaaaactataccataaccaaggaggatagaagtcatggaagctaagatagcac  6491100                                                                                   <---------RAP2.6(3)                                                                                  <---------MYB46(3)                                                                                 <------NtERF2                                                                                ------>NtERF2                                                                               <---------PCF5                                                                             <---------ATERF1(1)                                                                            <---------DEAR3(1)                                                                            --------->O2                                                                            <---------ANAC46                                                                            <---------TGA1a                                                                           <------NtERF2                                                                           --------->ATERF1(1)                                                                          ------>NtERF2                                                                         <---------DEAR3(1)                                                                         --------->ETT(2)                                                                         ----------->HVH21                                                                        --------->ATERF1(1)                                                                        <------NtERF2                                                                       <---------ATERF1(1)                                                       ------->MYC2   <---------ANAC46                                           ----------->HVH21          <---------DEAR3(1)                                        --------->ARR14(2)   <-----------GT1<---------O2                                    <------NtERF2      ------->MYC3   --------->ALFIN1           <---                                   ------>NtERF2    <---------ALFIN1 --------->ATERF1(1)        <----                                  --------->ATERF1(2)  <-------MYC3 --------->ABI4(2)        <-------                                  <---------ATERF1(2)  <-------MYC4 <---------MYB46(3)      <--------                                  --------->ANAC46--------->LBD16   --------->MYB55(2) <------MYB83         --------->ATHB51        <---------LBD16  <-----------HVH21--------->ALFIN1<---------SPL7====         <---------ICU4   <---------MYB46(3)     --------->ANAC46  <---------DEAR3(1)  <------MYB46(1) ------>ANAC58        <---------AtMYB61 <---------ARR14(2) <-----------HVH21<---------bZIP60(2)------ ------>ANAC58      --------------------->WRI1  <---------LBD16   <---------MYB52(1) --------->SPL7-- ------>ANAC46      <----------DOF2<---------RAP2.6(3) <-------MYC2<---------AtMYB61<---------MYB52(1) ----ZAT18        ------>ZmHOX2a(1)--------->LBD16------>NtERF2<---------LBD16--------->ATERF1(1)----   acgcgaatgcataattgttcctctttggtggtttagccggcagaactgactccggcacatgtttcaccggtggtggcgacggggccgttcggttttccgg  6491200            --------->YAB1            <---------ICU4           <---------YAB1    <---------At4g35610    --------->At4g35610    ----------->RAV1(2)   ------>NtERF2                                                                                    < --------RAV1(1)                                                                           <---------At4g35610 -----MYB52(1)                                                                             --------->At4g35610 --LBD16 --------->YAB1                                          <---------ZAT14           <---------ZAT2 ---------AGL1                                                   --------->ZAT18           --------->ZAT2 ===============RAV     --------->ALFIN1                    --------->ICU4           <--------P<----- --->LBD16 --------->ICU4                             <------ZmHOX2a(1)        *TSS  ================ ------->ALFIN1--------->YAB1                        --------->ICU4        --------->MYB46(3)  ------ ----->ALFIN1 <---------YAB1                      <---------ANAC46    --------->MYB52(1) <------ZmHOX2a(1)   tgtggcacctgtcattatgatagagaatggggcgagagagagatagagagttgtgaggattaatgagtagactaacaacaacttgtggtaaggagctgtg  6491300               <---------ANAC55(1)               <---------ANAC58               --------->TGA1a               <---------ANAC46               <---------ANAC58               <---------O2                                                                   <------               --------->O2                                                                   -------  <-----------TBP  <---------ANAC46                                                           <------ ---------ANAC46 --------->ALFIN1                                                            <------- ----ANAC46    <---------TGA1a         <----------ID1              ----------->GT1    --------->MYB52(1) ========================MYC_MYB     <---------ATHB12  --------->TOE1(2)             --------->RVE1(1) --->ALFIN1--------->DEAR3(2)    ------------>CBF      <---------SPL7           ------>ZmHOX2a(1)   tgtcttatatagaacagacgtgtgtgtattcagagtccaatgagacaagggcaaaatcgtccgagagtatgggaaaactgtcctaaaatatcggtatcat  6491400                                                                                            -------->HAHB4                                               <----------ID1                               ---------                                        <---------ANAC58                                   <---------YAB1                                        <---------ANAC46                         --------->ANAC58                                        <---------ANAC58                         --------->ANAC46                                    <-------MYC2                                 --------->ANAC58                                    ------->MYC3                               --------->MYB52(1)  --                                    <-------MYC3                             <---------MYB52(2) <---- --HAHB4                           --------->ANAC58                          --------->MYB46(3)<----- -->YAB1                           --------->ANAC58                  --------->ZAT6        <---------ATHB12 ---ICU4                          <---------TOE1(2)                 <---------YAB1        <---------TOE2(3) --YAB1              ---------->DOF2------->MYC2                 <---------AHL20(2)    <---------MYB52(2)   tacatttgttttttgttcttggttaaagaacatttgcacgtttcgtttagagacaaaacaaaaacattttatcagtagaacaaacggcaactaatgatac  6491500                                                                                  --------->AHL20(1)                                                                                  --------->AHL20(2)                                                                                  <---------AHL20(1)                                                                                  <---------AHL20(2)                                                                               --------->YAB1                                --------->ATHB12                              --------->ICU4                                --------->ATHB51                            <---------ICU4                                -------->ATHB1      ------>MYB46(1)         --------->YAB1                      <-----------GT1               ------>MYB83  --------->AtMYB61                     --------->AHL20(2)            ----------->RAV1(1)     --------->ICU4                     <---------AHL20(2)     --------->ANAC46      ----------->RAV1(1) >YAB1         <---------ANAC55(2)        <-----------GT1   <------ZmHOX2a(1) <---------YAB1 ------->AHL20(2)<---------AHL20(2)     --------->YAB1   --------->DAG2    <---------YAB1          -- -----ANAC55(2)--------->ANAC55(2)  <---------AHL20(2)  ---------->DOF2  --------->YAB1         ----- --TEIL        ----------->GT1 <---------YAB1    --------->MYB46(3)     --------->AHL20(2)      -----   ataaatttcagtttaatatgtaattaactatgtattattgaattatactctaccaacaaaaaggacgaccacaaataataataataaattggagggccta  6491600                 --------->ANAC55(2)             <------ZmHOX2a(1)       <---------YAB1                                                       ------>ZmHOX2a(2)       --------->ANAC58                                                     =============HOX2a_HOX2a       --------->ANAC58                                            --------->ETT(2)     --------->At4g35610       <---------ANAC55(2)                                         <---------ETT(2)     <---------At4g35610    --------->ICU4                                         <-------GAMYB  --------->ARR11(3) --------->GT1<---------ARR14(2)                      --------->WRKY38(1) <---------ARR11(3)    <---- ---->MYB52(1)--------->ARR14(2)         <---------At4g35610 <---------MYB46(3)   <------ZmHOX2a(1) - ----->DOF2 ----------->GT1              <---------ZAT2   <-----------RAV1(1)   <---------TOE2(3)   <   aaggtaattacgaaaggatacttgttgtccatgactccatgtgagcttgttgaatgttgactgttgttgtcgacttgatcttgaggattgagctcatatt  6491700                 --------->AHL20(2)                 <---------AHL20(2)                 <---------AHL20(1)            --------->AHL20(1)            <---------AHL20(2)            <---------AHL20(1)            --------->AHL20(2)                  --------->HSFB2a(2)           <---------AHL20(2)            <-----------GT1        --------->AHL20(2)              <---------CCA1(2)       <---------AHL20(2)         --------->AHL20(2)                        <---------CCA1(1)       <---------ATHB12           --------->AHL20(1)                       --------->ARR11(3)       --------->AHL20(2)         <---------AHL20(2)       <---------AHL20(2)              --------->ANAC46       <---------ATHB51           <---------AHL20(1)  <---------AHL20(1)   <---------GLK1(2) -------GT1--------->AHL20(2)    --------->ICU4 <---------HSFB2a(2)        <---------ARR11(3) -------->At4g35610         ----------->GT1  ------>ZmHOX2a(1) ----------->GT1<---------AHL20(2)    < ---------At4g35610  <-----------GT1 <---------AHL20(2)   --------->AHL20(2)<---------RVE1(1) -------   acagctcaaataattttattttatttcaatttgtaatattttatatccttctgtaacatatttaatggtgaaaacaagatttttttttaaaaaacacaac  6491800  Previous    Next  AGI:  At3g18830.1    Description:  ATPLT5 (POLYOL TRANSPORTER 5); D-ribose transmembrane transporter/ D-xylose transmembrane transporter/ carbohydrate transmembrane transporter/ galactose transmembrane transporter/ glucose transmembrane transporter/ glycerol transmembrane transporter/ hydr. Identical to Polyol transporter 5 (PLT5) [Arabidopsis Thaliana] (GB:Q8VZ80;GB:Q9LS92); similar to mannitol transporter, putative [Arabidopsis thaliana] (TAIR:AT2G16130.1); similar to mannitol transporter, putative [Arabidopsis thaliana] (TAIR:AT2G16120.1); similar to putative polyol transporter protein 4 [Lotus japonicus] (GB:CAJ29291.1); similar to putative sugar transporter; member of ma Range:  from: 6488868    to: 6491279    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version