Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            --------->REM1(1)                      --------->At4g35610                                                  --------->TOE2(3)                      <---------At4g35610                                  --------->GLK1(2)                   <---------ZAT2                --------->ICU4            <---------ARR11(1)                   --------->At4g35610         <---------ICU4              <---------ARR14(2)                   <---------At4g35610    --------->ICU4     <---------AHL20(2)          --------->ARR11(3) <----------DOF2  --------->ALFIN1    <-----------HVH21  <---------AHL20(2)------->TEIL  <---------ARR11(3) ----->ID1  --------->MYB52(1)   ------>ZmHOX2a(1)       --------->AHL20(2)--------->ARR14(2)   ctcctttagattacgaacgggtgctgctacatctcctctctgtcattagtcattactaaatatttaaaccaagttcgaatctgtcttacattatcttatt  6273600         ---------->DOF2                                                                        -----      --------->TOE2(3)      <----------DOF2    ---------->DOF2       <---------AHL20(2)    ---------    <---------ARR11(3)  <----------DOF2<---------ZAT18               --------->AHL20(2) <-----------GT1    --------->ARR11(3) <---------ICU4  --------->ZAT18    --------->TOE2(3)           --------->AHL20(2) --------->AHL20(2)<-------TEIL   ---------->DOF2         --------->TOE1(3)      <-------TEIL   -----   tcataaaatctcaaagccaaattcatcttttcttttgaaagtgctccctcaaaagctaaacctcaaacatataaaatagcaaattcattttaacaaaagc  6273700                         --------->MYB52(1)                    --------->AHL20(2)                 --------->WOX13(1)          --------->ANAC55(1)          --------->ANAC55(2)          --------->ANAC46                                                                       ----          --------->ANAC58                                                                  ------>NtERF2          --------->bZIP60(2)                                                              --------->DEAR3(1)          --------->O2<---------ANAC55(2)                                --------->MYB46(3)--------->LBD16    --------->GLK1(1) --------->ANAC55(2)                 ------>ZmHOX2a(1)  --------->DEAR3(1)  ---- ---->TOE1(3) --------->ANAC58                 --------->ZAT14      --------->LBD16 <-----------HVH21 ->DOF2   --------->ANAC58                   <---------At4g35610    --------->HSFB2a(2)  <---------LBD16 ---->TOE2(3) --------->ANAC58               --------->At4g35610    <---------HSFB2a(2) <---------ANAC46   ttaatgaattccacgtaagcaattacataacgtttttgcccctagtcagtagagtccctccttctaactccgagaaccagcgtccatgtctcgcggacca  6273800                                                               <-------GAMYB                                                       --------->TOE1(2)                                                       --------->TOE2(2)                                                      ----------->RAV1(2)                                                      --------->ZAT2                                                      <---------ZAT2                                                     -------->P<---------ANAC58                                                     =====================================MYC_MYB                                                     ------>MYB83                                                     ------>MYB46(1)                                               <-------PIF4    <---------ANAC58                                               ------->PIF4    ===========================MYC_MYB                                               <-------PIF5    ===========================MYC_MYB                                               <-------MYC3    <---------ANAC46                                               ------->MYC4   <---------MYB46(3)                                               <-------MYC4   <------MYB46(1)                                               ------->PIF5   --------->MYB52(2)                                               ------->MYC3  <---------MYB46(3)                                               <-------MYC2 =========================================                           --------->REM1(2)   ------->MYC2 ==============================MYC_MYB                          --------->ALFIN1    =========================MYC_MYB                         ------->MYC2         --------->O2  <--------P                         <-------MYC2         <---------ANAC58<---------DEAR3(2)        <---------ANAC46                         ------->MYC4         --------->TGA1a<---------AtMYB61      <------NtERF2                         ------->PIF5         <---------TGA1a--------->MYB111(1)  --------->ALFIN1                         ------->MYC3         =====================MYC_MYB      <---------TGA1a                         <-------MYC4         =======================================MYC_MYB                         <-------PIF5         <---------bZIP60(2)               <---------bZIP60(2)                         <-------PIF4         <---------O2 ===============================MYC_MYB                        <---------TGA1a       ================MYC_MYB           --------->O2                        --------->TGA1a       <---------ANAC46<------MYB83      --------->TGA1a     <                        --------->ANAC55(2)   <---------ANAC58--------->MYB55(2)<---------O2        -         <------MYB83   ===========================================MYC_MYB      <---------ANAC46    <        <---------TOE2(2)<-------MYC3         ================MYC_MYB        ========================        <---------TOE1(2)------->PIF4         <---------ANAC55(2)            ------->GAMYB          -     --------->MYB52(2) --------->O2          --------->ANAC55(2)            ========================    <-------TEIL        <---------O2      <-----------HVH21<-------GAMYB     ----------->HVH21      - <---------ANAC58       ===========================================MYC_MYB  --------->DEAR3(2)      - <---------ANAC58       ======================================MYC_MYB       --------->MYB46(3)      < -->MYB83<------MYB46(1)======================================MYC_MYB      --------->At4g35610    <-- -->MYB46(1)          <------------OsbHLH66  ------------>OsbHLH66      --------->At4g35610 <--------   aatgcgttcgtaggtaagacgcttgcacgtgtcgagatgtaatcggtcacgtgccaacctgggttggttgcatcagcatccgacgtggcgatgtgaatgg  6273900 ------->MYC4 <-------PIF4 ------->MYC2 <-------PIF5                              --------->ANAC58 ------->PIF5                       <---------ARR14(2) <-------MYC4                       --------->ARR14(2) <-------MYC2                    ------------>CBF ------->MYC3                    --------->MYB46(3) ------->PIF4                    <---------MYB55(2) <-------MYC3                   --------->ANAC58 =========MYC_MYB               --------->ANAC58 ---------ANAC55(2)             --------->ANAC46 -------->ANAC55(2)            ------>MYB83--------->ANAC58 ---------O2                   ------>MYB46(1) =========MYC_MYB            <---------MYB111(2)                     <---------AHL20(2) -------->O2                 --------->MYB46(3)                      --------->AHL20(2) =========MYC_MYB            --------->DEAR3(1)                     --------->AHL20(2) -------->bZIP60(2)          <---------MYB55(2)                     <---------AHL20(2)           ---- -------->TGA1a             --------->ANAC46                     --------->YAB1           --------->ZAT6 ---------TGA1a             --------->ANAC58                  <---------HSFB2a(2)       --------->YAB1 ----------OsbHLH66         --------->ANAC58                  --------->HSFB2a(2)  ------>ZmHOX2a(2) -AtLEC2     --------->TOE2(2)<---------ALFIN1  <----------DOF2 ----------->TBP    ----------->GT1 <-   ccacgtgctacaaaacctatgtatagaaacacccacccaatccccaagcacttttattcattttctataaaaaaatttacaaggatcgtataatactact  6274000                     --------->LBD16                    <---------HSFB2a(2)                    --------->HSFB2a(2)              <---------AHL20(1)              --------->ARR11(3)                                       --------->ANAC58              <---------ARR11(3)               ----------->GT1         --------->ANAC58              --------->AHL20(1)       ----------->GT1               ---------->DOF2             <---------AHL20(2)        <----------ID1    --------->AHL20(2)         --------->AHL20(2)        <---------AHL20(2)   --------->AHL20(2)   --------->ANAC58 *TSS    <---------AHL20(2)  --------->TOE2(3)--------->DAG2     ---------->DOF2     --------->YAB1 ----->MYB52(1)  <-----------GT1--------->YAB1------------------------>ANAC81--------->ANAC58 -----------MYB.PH3(1)      <---------ICU4  ---------->DOF2 ---------->DOF2---------->DOF2   aacagttttttttaaatattttccagataaacattaataaaacgataaaaggcaaaaaataaaaaagaaaagaaagcaaaagcaaaatcaaaatcgatat  6274100                                                             --------->ANAC46                                                             --------->ANAC58                                                           ----------->RAV1(1)                                                           <---------ALFIN1                    <----------DOF2                        --------->AtMYB61                 <------------------------ANAC81          --------->ANAC46                <----------DOF2                         --------->ANAC46      --------->ANAC58        <-----------GT1    --------->WRKY12      --------->ANAC46        ---------->ID1     --------->WRKY38(1)      --------->ANAC58       <-----------GT1    <---------MYB52(1)  ----------->RAV1(1)--------->KAN4(2)   <---------WRKY38(1)  <----------DOF2        <-------GAMYB --------->ANAC58  ----------->RAV1(1)  -   atcagacaacgcctcgacctttctttctttttttccttctcatcgtctccgttgaacaacaccacacaaacaccagaagaacaccagataattcccatgg  6274200           --------->ARR14(2)           <---------ARR14(2)         ----------->ARR10                                                         --------->ANAC58     --------->ZAT2                                                <---------GLK1(1)     --------->At4g35610                      ---------->DOF2      --------->GLK1(1)     <---------At4g35610               --------->YAB1<---------ZAT14   <----------DOF2 --------->MYB52(1)     <---------ZAT2                   <---------ATHB12    <---------MYB46(3)    <---------SPL7 ------ ------>TEIL                <---------ANAC46 <------ZmHOX2a(1)  <---------TOE2(3)  --------->ANAC58 <   tgaaccgagctcagatttgaaaattgaaggtcgtagacgaatcataaggaaagagagaagtggtttgagatttcttttttgacggacgaaaacggagata  6274300                                                              <---------ANAC58                                                              <---------ANAC46                                                              <---------RAP2.6(2)                                                       <---------ZAT14                                                       <---------ZAT2                                                       --------->ZAT14                                                       --------->ZAT2                                                     --------->ATERF1(1)                                                    --------->LBD16                                                   --------->ALFIN1                                                   <---------ANAC46                                                   <---------DEAR3(1)                                                  <---------At4g35610                                                  --------->ATERF1(1)                                                  <---------ABI4(1)                                                  <---------LBD16                                                  --------->At4g35610                                                  <------NtERF2                                                 ------>NtERF2<---------ANAC58                                                 <---------ATERF1(1)                             --------->ARR14(2)  <---------DEAR4(2)                         ----------------->AGL1  <---------ERF1                      --------->DOF5.7(2)        <---------RAP2.3(1)                      <---------MYB52(1)         <---------RAP2.6(1)                     <-------GAMYB               <---------ORA47(2)                 <---------DEAR3(1)              <---------RRTF1(1)                 --------->DEAR3(1)             <---------RAP2.3(3)                --------->RAP2.3(1)             <---------DEAR3(1)                <------NtERF2<---------ARR14(2) <---------ATERF1(2)                --------->ATERF1(1)             --------->ATERF1(2)               <---------RAP2.3(1)              <---------RRTF1(3)               <---------ERF1<---------ARR11(3) <---------RRTF1(2)               <---------ATERF1(1)              <---------DREB2C(2)              <---------RAP2.3(2)               <---------RAP2.6(2)              <---------RAP2.3(3)               --------->ALFIN1                       --------->LBD16        <---------ARR14(2)   <---------GLK1(2)  <---------RAP2.3(2)             --------->ARR14(2)   <---------LBD16 <------NtERF2               <---------ABI4(1)<------NtERF2   <---------ARR14(2)  --------->ALFIN1------>NtERF2         <------NtERF2<------NtERF2         <---------ALFIN1 --->CCA1(2)  <---------DEAR3(1)      <---------DEAR3(1)   --------->ALFIN1------->GAMYB   <---------ZAT14 ----------DOF2------>NtERF2 --------->ARR11(3)--------->ATERF1(1)        --------->MYB46(3) <-------   agctttgggggaaatggcgacgccgttaccagattttgagacggcgagaggcggcggagcagtggcgtcttcttcaaccacggttcttccgagttctgtg  6274400                                  <---------ANAC58                                  <---------ANAC58                                  <---------ANAC46                               --------->ALFIN1                             <-----------RAV1(1)                           ----------->RAV1(2)          --------->LBD16                           <---------ANAC46           <---------LBD16                           <---------ANAC58          <---------bZIP60(2)                           <---------ANAC58          <---------ANAC46                         --------->WRKY38(1)      ----------->HVH21           <---------GLK1(2)                        <---------MYB52(1)        ----------->TGA1          ------>ZmHOX2a(1)                       <-------GAMYB --------->ARR14(2)--------->ANAC58     <---------YAB1       ----                       --------->At4g35610      --------->At4g35610      <------ZmHOX2a(2)      -----                       <---------At4g35610   --------->HSFB2a(2)        --------->ARR14(2)   --------      <<<<<<<<<TBF1   --------->MYB52(2)     <---------LBD16    <---------GLK1(1)  <---------ANAC58   <<<<<<<<<TBF1     --------->SPL7  <---------ARR14(2)--------->ANAC58 <---------ARR14(2)<----------DOF2 --ANAC46<<<<<<<<<TBF1<---------MYB46(3)     <---------HSFB2a(2)--------->GLK1(1)  <---------ANAC58   tcttcttcttcttcttcatctcgtccgttgcctgtggcgaattcgttctcggatgacgcggaagagatttctccgatcctgattttcttgttctttcata  6274500  Previous    Next  AGI:  At3g18290.1    Description:  EMB2454 (EMBRYO DEFECTIVE 2454); protein binding / zinc ion binding. similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G74770.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42170.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68085.1); similar to putative E3 ubiquitin ligase [Lotus japonicus] (GB:BAF38781.1); contains InterPro domain Zinc finger, CHY-type; (InterPro:IPR008913); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Hemerythrin/HHE cation-binding motif (InterPro:IPR012312); contains InterPro domain Zinc finger, RING-typ Range:  from: 6274001    to: 6280516    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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