Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                               --------->ANAC58                                                             --------->ANAC58                                                         --------->ANAC58                                                    <---------LBD16                                                  --------->ARR14(2)                             ----                                                  --------->KAN4(2)                   ---------------                                                  <---------ARR14(2)                 <---------------                                                 <----------TaMYB80               <---------ARR14(2)                                                ---------->TaMYB80               <----------TaMYB80                ------->TEIL           <---------HSFB2a(2)  <---------------AtSPL3--------->KAN4(2)           --------->YAB1              --------->HSFB2a(2)<------NtERF2          <---------KAN4(1)        --------->WOX13(1)         --------->ARR14(2)    --------->ANAC58        --------->KAN4(1) ------->YAB1<---------YAB1      <---------YAB1 <---------KAN4(2)               ---------->TaMYB80 <-   agcataatatcagtcatgaatttgattttctcatcacgattcgagacgagcatattcggaggcaagtacttctccagactagaatataccgagtttggga  6240200            ------>ZmHOX2a(2)           <------ZmHOX2a(2)          <---------ARR14(2)          <---------AGP1          --------->AGP1          --------->ARR11(3)          <---------ARR14(3)          --------->ARR14(2)          <-----------ARR10          --------->ARR14(3)   <---------At4g35610   --------->At4g35610                                                                           <---   <---------ZAT2                                                                                <---   --------->ZAT2                                                                <---------ZAT6  <--- ----->GLK1(1)        --------->MYB52(1)                            <---------MYB52(2)--------->At4g35610 >AGL15   <---------ARR11(3)                <---------TOE2(3)      --------->ANAC58   <---------At4g35610 --AGL1  <---------CCA1(2)                  <---------TOE1(3)      --------->ANAC58 <--------P   <--- --------ATHB12--------->YAB1        <-------GAMYB   --------->TOE2(3)  --------->MYB46(3)     <-----   aatcaagctgcagatcttcataactatcgggtctatgctcgttgttagggtttagccttagtctctggcaagaaaccatcgtagaggtagctctcaatgt  6240300         --------->DEAR3(1)        <------NtERF2        --------->RAP2.3(1)       ------>NtERF2       <---------ATERF1(1)       --------->At4g35610       --------->LBD16      --------->RAP2.6(2)      --------->ATERF1(2)      --------->RAP2.3(2)      --------->RAP2.3(3)      --------->DEAR3(1)     <------NtERF2     --------->DEAR4(2)     --------->RRTF1(1)     --------->ORA47(2)     --------->ERF1     --------->RAP2.6(1)                                                                   --------->ANAC55(2)     --------->MYB46(3)                                                                    --------->O2     --------->ATERF1(1)                                                                   ==========     --------->DEAR3(2)                                                                    --------->TGA1a     --------->RAP2.3(1)                                                              <---------At4g35610     <---------ABI4(2)                             --------->DEAR3(1)                 --------->ZAT2    <---------ATERF1(1)                         <---------ALFIN1            <---------HSFB2a(1)    <---------At4g35610                       ------>MYB83                  --------->HSFB2a(1)    --------->At4g35610                       ------>MYB46(1)               --------->HSFC1(2)   --------->ARR14(2)                   --------->DOF5.7(2)      <---------CCA1(2)    <---------ZAT2  <---------PCF2                        <---------MYB52(1)    <------NtERF2 <---------HSFC1(2) ------bZIP60(2)                       <-------GAMYB        <---------DEAR3(1)        --------->At4g35610 ------ANAC58     --------->GLK1(1)   <---------ANAC58  <------NtERF2      <-----------ARR10 -------- ------ANAC46     <---------GLK1(1)   <---------ANAC58<---------DEAR3(1)<---------ANAC58   <---------TGA1a ------ANAC58     <---------ARR14(2)  --------->ANAC55(2)  <------NtERF2<---------ANAC58   <---------O2 ------HVH21  --------->YAB1          <---------ANAC55(2)<---------DEAR3(1)------->TEIL <---------ZAT18   cgtgggagccgccgaatgagaattctgacctgcaattgttccgttaccttccaccgtcgtcgtcgtcgtctcttgcgaaccttctcgctgctcacttgac  6240400                                                                           --------->TOE1(3)                                                                           --------->TOE2(3)                                                                         --------->ARR11(3)                                                                         <---------ARR11(3)                                                                 --------->ANAC58                                                               ---------->DOF2---------->DOF2   ---------->DOF2                                   --------->ANAC46    --------->GLK1(2)  <---------------AGL15                            --------->ZAT6--------->ANAC58  --------------->AGL15                            --------->ANAC46     --------->CCA1(1) =============bZIP_DOF               <---------TOE2(3) --------->ZAT14  --------->RVE1(1)         <-- --->HVH21   <------NtERF2----------->GT1    <<<<<<<<<TBF1   <---------HSFB2a(2)                  <--   attactaaagaaggcagagaattcaagtgagaaaaaactagggtttcttcttcacactacattccaaaagcaaaaaatcttaaaggggaattgaaatcga  6240500                     --------->GLK1(2)                    --------->ARR14(2)                                       <---------AHL20(2)                    <---------ARR14(2)                                     <---------CCA1(1)            <---------AGP1                                    --------->KAN4(2)        <---------AHL20(2)            <---------ARR14(2)                               <---------KAN4(1)       <----------DOF2      --------->ARR11(3)                                     --------->HSFB2a(1) <-----------GT1     <---------At4g35610<---------YAB1            <---------TOE2(3)        <---------RVE1(1)   <-----------GT1  <---------GLK1(2)             <---------TOE1(3)       <---------GLK1(2)<---------AHL20(2) --------DOF2 ------>ZmHOX2a(2)         <-------GAMYB    <---------YAB1   --------->ARR11(3)--------- -------DAG2--------->ARR14(2)    <---------GLK1(1)  <---------GLK1(1)    <---------ARR11(3)<--------   ctttttaagctctcgatctggagattctgatttttgagttcccgttgaagttagggtttctgaatgttccctcgaagatttttttatcttttatttattt  6240600                                                                                     --------->AHL20(2)                                                                                     <---------ATHB51                                                                                     <---------AHL20(2)                                                                                  <---------AHL20(2)                                                                                 --------->AHL20(2)                                                                           <------NtERF2                                                                           --------->ATERF1(1)                                                                           ------>NtERF2                      <-----------HVH21                                   <---------RAP2.3(1)                  --------->MYB52(1)                                      --------->RAP2.6(2)           --------->ANAC58 --------->ANAC58                              <---------ORA47(2)           --------->ANAC58 --------->ANAC58                              <---------DEAR4(2)       --------->ANAC58 --------->YAB1                                    <---------ATERF1(1)       <---------ANAC55(2)  --------->ANAC46                              ------>NtERF2       --------->ANAC58<---------ATHB12                                  <---------RAP2.3(2)        - <---------YAB1  --------->AtMYB61        ----------->GT1                <---------DEAR3(1)       <-- >AHL20(2) --------->ANAC46--------->SPL7 <---------ZAT6                 <---------RAP2.6(2)     <--- -AHL20(2) *TSS --------->MYB46(3)  --------->YAB1    <-----------GT1    <---------RAP2.3(3)    -----   gttaatattacgcacgaaaccaccagtcatacgccttataagaagagttaaatgattttctagcccatctattaggcggcccattaaataattcgaaccg  6240700                                                                                                -----                                                                                        ------->MYC3                                                                                        <-------MYC2                                                                                       <---------O2                                                                                       <---------TGA1a                                                                                       --------->O2                                                                            <------------CBF   <-----                                                                           --------->ATHB12    ------                                                                         ========================bZIP_DOF                                                                         ========================MYC_MYB                                                                         <-------GAMYB --------->TGA1a                                                                         <----------DOF2------->MYC2                                                                        <---------ANAC58<-----------HVH21                                                                        <---------ANAC58<-------MYC3    <------MYB46(1)                                                    <---------ZAT18 <---------ANAC55(2)    <------MYB83                <---------LBD16                   <---------MYB52(1)   --------->ANAC55(2)    ----------->GT1       <---------KAN4(2)          ============================================bZIP_DOF -------->MYB52(2)   <---------LBD16                 <----------DOF2   --------->ZAT18 ============== -------MYB52(1)    <---------At5g28300      --------->ATHB12    <-------GAMYB <---------MYB46(3) ------MYB52(1)     --------->MYB52(1)      --------->ICU4       ================================MYC_MYB ------>GT1        <-----------GT1          <---------ATHB12    <---------MYB46(3)     --------->ANAC46   gttatttggtttaaactgaaattaccggtataatcgtggaattgaaatcattcgactttgagttgtctgttagtgcgttattggttaacacgtgagagat  6240800                                 <-------MYC4                                 ------->MYC2                                 <-------MYC2                                 ------->MYC4                                 ------->MYC3                                 <-------MYC3                                <---------ANAC55(2)                                --------->ANAC55(2)                                =====================bZIP_DOF                                ====================================bZIP_DOF                                =====================bZIP_DOF                                ====================================bZIP_DOF                                --------->O2                                <---------TGA1a                                <---------O2                                            ------>NtERF2           <---------LBD16 --------->ZAT18                                     <---------ANAC58          ----------->RAV1(2)   --------->TGA1a                           <---------ANAC58    <------          ------>ZmHOX2a(1)--------->ZAT14                           <----------DOF2 --------->At4g35610 ---->GLK1(1)              <---------ZAT18                           <---------DAG2  <---------At4g35610 ----ARR11(3)   ==========================MYC_MYB       *TSS    <------MYB46(1)<---------ANAC58 --->ARR11(3)   ------------>MYB.PH3(2)        <----------DOF2  <------MYB83<---------CCA1(2) ------- ============================MYC_MYB      ---------->DOF2---------->DOF2  <---------ANAC58    -------   atcgatagtctcctctggagtttgttaagttcacacgtgtgaatgaaagctttcgctctcaaagcttggtgctttttcgtctcttgcctctgccaaaatc  6240900               <----------DOF2              ------>ZmHOX2a(2)       --------->ANAC58        --------------------->WRI1   --------->SPL7       --------->DEAR3(1)           --------->SPL1(1)      <------NtERF2                <---------SPL7     <---------ATERF1(1)           --------->TOE1(2)     ------>NtERF2----------------->AGL1                   <------NtERF2     <------NtERF2<-----------------AGL1                   ------>NtERF2     <---------RAP2.6(3) --------->ANAC58                 ------>NtERF2    --------->RAP2.6(2)  --------->ANAC46                 --------->LBD16    --------->ANAC46     --------->ANAC55(1)              <---------RAP2.3(1)    --------->ATERF1(2)  --------->ANAC58                <---------DEAR3(1)    --------->DEAR3(1)   <---------ANAC55(2)            --------->At4g35610    <---------ATERF1(2)  --------->ANAC55(2)            <---------LBD16    --------->ANAC58    <---------LBD16           <-----------ARR10    --------->ANAC58 <-----------HVH21--------->ANAC58  <---------At4g35610           --------->ATHB12   <---------RAP2.6(2)<------ZmHOX2a(2)      ---------->DOF2                         <---------HSFB2a(1) ---ARR11(3)  --------->HSFB2a(1) ------->GAMYB   <---------ARR11(3)                --------->GLK1(2) -->GLK1(2) --------->ARR11(3)   --------------->AtSPL3<-----------RAV1(1)        <------ZmHOX2a(1) < -->ARR11(3)<---------ARR11(3)--------->MYB46(3)  --------->ARR11(3)     --------->ALFIN1           <   ttttggccgccatcgatctttccgatcacggaacaaccgtacgaattgaaagtatctctgcggcgaagtagaaatgtggacggaggaatctttggattta  6241000             --------->ARR14(2)             <-----------HVH21             <---------ARR14(2)          <---------TGA1a                                                   --------->ZAT18          <---------O2                                                    <---------ZAT2          --------->TGA1a          <-----------------AGL1                 <---------At4g35610          ===========================MYC_MYB                              --------->At4g35610          --------->O2             ----------------->AG            --------->ABI4(1)          =========================MYC_MYB                         ------>NtERF2         <XXXXXXXXXXXXXXXXXXXXMIR842                              --------->DEAR3(1)         <------NtERF2             <-----------------AGL2         --------->ANAC46        <---------RAP2.6(3)    <---------ANAC58                   <---------ALFIN1        ------>NtERF2          <---------ANAC58                  --------->MYB46(3)       ----------->HVH21    <--------P               --------->ANAC46     --------->ZAT2       --------->DEAR3(1)  <-------GAMYB             --------->ANAC58  <---------ALFIN1      --------->DEAR3(2)  <---------MYB46(3)         --------->ANAC58--------->RAP2.3(3) ---------ANAC58         <---------AtMYB61   <---------ANAC58   <---------At5g28300 ---------ANAC58         <---------YAB1      <---------ANAC58  <-----------GT1                   <---   gtgcttgtgccgacgggtctggtcgtgatggttgcttaccatgtctggctcgtctacgctattcttcaccgccccaagctcactgttatcgctctcaacg  6241100  Previous    Next  AGI:  At3g18210.1    Description:  oxidoreductase, 2OG-Fe(II) oxygenase family protein. similar to oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors [Arabidopsis thaliana] (TAIR:AT1G22950.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42214.1); contains InterPro domain Prolyl 4-hydroxylase, alpha subunit; (InterPro:IPR006620); contains InterPro domain 2OG-Fe(II) oxygenase (InterPro:IPR005123) Range:  from: 6237936    to: 6240611    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g18215.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G24600.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68116.1); contains InterPro domain Protein of unknown function DUF599 (InterPro:IPR006747) Range:  from: 6240856    to: 6242579    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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