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Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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       <---------YAB1
     <---------ICU4
     --------->YAB1                                                                <-----------GT1
    <---------ATHB12                                                       ----------->GT1
    --------->ICU4                                                       <---------ANAC46        <--
<---------YAB1                                                           ----------->GT1  --------->ATHB12
<---------ATHB12    <---------DAG2                                 --------->GLK1(2)     <---------YAB1
------>GT1          <----------DOF2                     ----------->GT1 --------->ALFIN1<---------GLK1(2)
---->AGL1----------->GT1                   <---------LBD16    ---------->DOF2   <---------ICU4 <----
 
gtaatcaatgatgagtaaaaaaacttttttttcttagcattcgatttgtggaattgaaatggtaaaaaagaaactgtggtgaaaaattacagattattga  6024400
                  --------->ANAC58
                  --------->ANAC46
                  --------->ANAC58                                                           -------
           --------->ANAC46                                                                  <------
          --------->At4g35610                                               --------->ANAC55(2)
      <-----------ARR10                                                     <---------ANAC55(2)
      --------->ARR14(2)                                                    <---------HSFB2a(2)
      <---------ARR14(2)      <------ZmHOX2a(1)                             --------->HSFB2a(2)
----ZmHOX2a(1)  --------->MYB46(3)       ------->TEIL          <---------ARR11(3)    --------->YAB1
-----TOE2(3)  ----------->RAV1(1) ---------->DOF2--------->ATHB12      <---------------AtSPL8-------
 
ggaacagagtatcagcgcaacaagcaagagagaggaagaaagtgtatgtgagtgatttggaatcaagagctaatgagttacagaacaacaatgaccagct  6024500
                                                                                             <------
                                                                                            <-------
      --------->ARR11(3)                                                                 <---------ICU4
      <---------ARR11(3)                                    --------->ANAC58            <---------AHL20(2)
-->ZAT2             <---------SPL7               <---------YAB1                         --------->AHL20(2)
---ZAT2--------->GLK1(1)               <---------ANAC46     --------->ANAC58    <---------ATHB12
-->At4g35610  <----------DOF2          ----------->GT1  --------->ZAT6        --------->WOX13(1) <--
 
cgaagagaagatttctactttgacgaacgagaacacaatgcttcgtaaaatgcttattaacacaaggcctaaaactgatgacaatcactaaatatttacc  6024600
                           <---------YAB1
                     <---------YAB1
                 <---------ANAC46
               <---------ZAT14
          --------->ZAT14 <---------ARR11(3)                                                      <-
  >>>>>>>>>>>>>>>>>LFY--------->YAB1 <----------DOF2          <----------DOF2                -------
---At5g28300   --------->ZAT14   <----------DOF2              <---------DAG2                 <------
----GT1   <---------ZAT14 --------->ARR11(3)       <---------ANAC46                         <-------
--------DOF2<---------ANAC46 <----------DOF2    <---------AtMYB61                   <----------DOF2
 
ctttaatccattgttcagtgttgtatgattatctttctttcttttttggttttggtttgtatacactttttgttcgaataacattcactttgagcatcat  6024700
                                                                                                <---
                                                                                                ----
                                                                                             <------
                                                                                           ---------
                                                                                           ---------
                                                                                          --------->PCF2
                                                                                          <---------TCP15(1)
                                                                                          <---------TCP20
                                                                                         <---------PCF2
                                                                                         --------->TCP15(1)
                                                                                         --------->TCP20
                                                                                        <---------DEAR3(2)
                                                                                        <------MYB46(1)
                                                                                        <------MYB83
                                                                                        <---------TCP15(2)
                                                                                       --------->MYB55(2)
                                                                                       <---------MYB46(3)
                   ----------->GT1                                                    <---------ANAC46
                 ---------->DOF2                                                      --------->ALFIN1
       --------->CCA1(2)                                                            <---------MYB46(3)
      <---------GLK1(2)                                   ----------->TBP          <---------AtMYB61
      --------->ARR14(2)       ----------->GT1        ----------->GT1              --------->ALFIN1
--------->WOX13(1)--------->DAG2                      <------MYB46(1)            <---------ANAC46
--------YAB1--------------->AGL15     --------->DAG2  <------MYB83               <---------ANAC58
-->ATHB12   <---------------AGL15   ---------->DOF2   <---------ANAC55(2)        <---------bZIP60(2)
---ICU4--------->GLK1(1)       <----------ID1        --------->MYB111(1)         <---------ANAC58
--YAB1<---------ARR14(2)     --------->MYB52(1)      --------->MYB59            <-------------------
 
tgtcattcagatttgcaaaataaagtaaaaaaaaacgaaaaaaggcaagaagagattaggtataaaaactagagttctaaaatgccgtggtgggtcccac  6024800
                                                                                                   <
                                                                                                   <
                                                                                                   <
                                                                                                   <
                                                                                                 <--
                                                                                             <------
                                                          --------->At4g35610                <------
 *TSS  <---------ANAC58                                   <---------At4g35610               --------
----MYC3                                               <---------ZAT2                    --------->ARR11(3)
--->MYC3                                               --------->ZAT2              --------->CCA1(2)
---ALFIN1                                              <---------At4g35610    ---------->DOF2-------
>TCP15(2)                                             ------>MYB83 --------->AHL20(2)    <---------ARR11(3)
>TCP23 <---------ANAC58           --------->GLK1(2)   ------>MYB46(1)       <---------YAB1  <-------
----TaNAC69(2)             <---------LBD16 <---------ANAC46        <---------AHL20(2)  ----------->ARR10
 
atgttcttatgcgagtgaaacgaagaagtctctggagaatttgttttcgtagagaccaagctgctgctatataaatattgtgaaagagatgagattttaa  6024900
                                                                                                  <-
---------ANAC58                    <--------HAHB4                                                 <-
---------ANAC46                    <---------ICU4                                      --------->HSFB2a(1)
---------ANAC55(1)                 --------->YAB1                                      <-----------RAV1(1)
---------ANAC58                   --------->AHL20(2)                                   <---------HSFB2a(1)
-------AHL20(2)                   --------->ICU4                                    <------NtERF2 <-
---AHL20(2)                     --------->YAB1                                   <------NtERF2 <----
---YAB1                     ---------->DOF2                                      <---------LBD16 <--
->AHL20(2)             --------->At4g35610                   <---------REM1(1)   --------->ATERF1(1)
-->AHL20(2)         <------ZmHOX2a(2)            ----------->GT1               <---------DEAR3(1)---
--AHL20(2)        <---------GLK1(1)--------->ATHB51   --------->GLK1(2)     --------->ALFIN1  <-----
 
ttacttgtaagtgattcagagagatcagaagaaaagaataattacgaagaaatggagaattttggtgaagggagaagaagtggaggcggaatgttgccgt  6025000
                   <------NtERF2
                  --------->LBD16
                 <---------ANAC46
                 <------NtERF2
             <---------ATERF1(1)
            --------->RAP2.3(3)                        <------NtERF2
            --------->DEAR3(1)                        <---------RAP2.3(1)
            <---------O2                              ------>NtERF2
            --------->O2                             <---------RAP2.3(3)
            --------->RAP2.3(2)                      <---------RAP2.6(2)
            <---------DEAR3(1)                    ----------->TGA1
           <------NtERF2<---------YAB1            ----------->HVH21
           --------->ATERF1(1)                   <-----------HVH21    ------>NtERF2
           --------->DEAR4(2)                --------->MYB52(1)       <------NtERF2
           --------->RRTF1(1)               --------->AtMYB61         --------->LBD16             <-
------>NtERF2------>NtERF2                 <---------MYB55(2)         <---------At4g35610        <--
--------ANAC58  <---------LBD16            <---------ABI4(2)     ------>ZmHOX2a(1)              <---
--------ANAC46<------NtERF2                --------->MYB46(3)  ----------->RAV1(2)              ----
--------ANAC58--------->ATERF1(1)   <---------LBD16  --------->ATERF1(2)             <---------CCA1(2)
-----MYB52(1)<-----------HVH21      --------->LBD16  <---------DEAR3(1)    --------->ZAT6      -----
-------ZAT2--------->ERF1          <---------ANAC46  <---------ANAC46--------->RAP2.6(2)       <----
------>ZAT2--------->RAP2.3(1)     <---------ANAC58 --------->ATERF1(1)    <---------ALFIN1    <----
--GAMYB    --------->ORA47(2)      <---------ANAC58<---------ATERF1(1)--------->At4g35610     ------
 
tgctggctctaagcgccgtcgcggagtactatagactaccgtggaaaccaccggtgacggcgagtctcctggccgcgaacactctcgtttatctcaggcc  6025100
        ===================HOX2a_HOX2a
        <------ZmHOX2a(2)
   <-----------GT1                                                             --------->AHL20(1)
--------ANAC46                                                                 <---------AHL20(2)
----NtERF2                                                               --------->TOE2(3)
------ATERF1(1)                                                          --------->YAB1
-->NtERF2                                                               <---------ATHB12
---->ATERF1(2)                --------->ZAT14                <---------TOE1(3) <---------AHL20(1)
-----ATERF1(2)         --------->TGA1a          <---------ALFIN1       ------>MYB83
-----DEAR3(1)       ------>ZmHOX2a(1)----------->GT1         <---------TOE2(3) --------->AHL20(2)
--->RAP2.6(3)<---------MYB52(1)--------->MYB59 ------>ZmHOX2a(1)       ------>MYB46(1)
 
ggcgtttatcgatcccgttattcctcacatcagtgaggtctggttcaatcctcacctcatcttcaaggtaaaccaatcttaataaattccttcattcgcc  6025200
                                                             <---------------AtSPL8
                   -------->ZAP1                             --------------->AtSPL8
                 <---------WRKY18(1)                  --------->LBD16
                 <-----------GT1                     ------>ZmHOX2a(1)
                ----------->HVH21                    --------->LBD16                <---------TOE2(3)
                --------->WRKY12                    --------->TOE1(2)    <---------LBD16
        <---------WOX13(1)                          <---------LBD16    <---------ARR11(3)
       <---------ANAC58                            <---------ANAC46    --------->ARR11(3)
       <---------ANAC58       ------>ZmHOX2a(2)  <---------ARR14(2)    --------->ARR14(2)
      --------->ATHB12        ==============================HOX2a_HOX2a<---------ARR14(2)
 
aagagaaattgattgcaatttgaccgatttcgatctgaaattcgaatttgagtttcctgggaaatttgtaccaatatctggagaattagggattttgttc  6025300
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AGI:  At3g17609.1   
Description:  HYH (HY5-HOMOLOG); DNA binding / transcription factor. Identical to Transcription factor HY5-like (HYH) [Arabidopsis Thaliana] (GB:Q8W191;GB:Q8LB41;GB:Q9LUN6); similar to HY5 (ELONGATED HYPOCOTYL 5), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G11260.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81308.1); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004827); contains InterPro domain Basic leucine zipper; (InterPro:IPR011700)
Range:  from: 6023935    to: 6024699    Orientation: Forward
Links:  TAIR  MIPS 
 
AGI:  At3g17611.1   
Description:  rhomboid family protein / zinc finger protein-related. Identical to Uncharacterized protein At3g17611 [Arabidopsis Thaliana] (GB:Q8RXW0;GB:Q682Z5); similar to rhomboid family protein / ubiquitin-associated (UBA)/TS-N domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G58460.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81122.1); contains InterPro domain Peptidase S54, rhomboid; (InterPro:IPR002610); contains InterPro domain Zinc finger, RanBP2-type; (InterPro:IPR001876)
Range:  from: 6024802    to: 6026449    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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