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AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                           <---------ZAT6
                      <---------STY1(2)
                      --------->STY1(2)
                 <-----------GT1                                                          --------->ATHB12
               <---------AHL20(2)                                             --------->AHL20(1)
            <---------ARR11(3)              <---------AHL20(2)                <---------AHL20(2)
            --------->ARR11(3)             --------->AHL20(2)            <---------AHL20(1)
            <---------AHL20(1)        <---------YAB1                     --------->AHL20(2)
            --------->AHL20(1)     --------->ICU4                        --------->ARR11(3)
          --------->ARR11(3)       <---------YAB1             ---------->DOF2 <---------AHL20(1)
          <---------ARR11(3)    <---------YAB1           --------->ICU4  <---------AHL20(2)
          <---------AHL20(1)    --------->ICU4      <---------At4g35610  --------->AHL20(1)
       --------->AHL20(2)----------->GT1 ------->TEIL --------->ICU4     <---------ARR11(3)    <----
---->GT1  --------->AHL20(1)  --------->CCA1(2)   --------->ZAT18   ----------->GT1       <---------ICU4
 
tataccaaaaaaaaatattttttctagctagtgatatgattatgaattttatgtgtgctaattagtaaagagggaatatattatattggctattgattac  5676400
                            >>>>>>>>>RAP2.2
                          --------->ARR11(3)
                          <-----------ARR10
               --------->AHL20(1)
       ----------->RAV1(1)<---------ARR11(3)                       <---------ALFIN1
<----------DOF2--------->ARR11(3)                               <-----------GT1
-------GT1----------->RAV1(1)                      <---------HSFB2a(2)      <---------AtLEC2       <
 
accctttctgcgacaacatatattgggaatatctaaacacatactcgttgagttgtcgaagtttatatcaccacatcgtgcatgcagtactaaatttcaa  5676500
                              <-----------HVH21
                            --------->TOE1(2)
                            <-------MYC3
                            ------->MYC3
          <---------------AGL15
          --------------->AGL15
         ----------------->AGL1
         ----------------->AGL2
         <-----------------AGL1            <------MYB46(1)
         ----------------->AG--------->ALFIN1    >>>>>>>>>EIN3                     <---------ARR11(3)
         <-----------------AGL2   --------->At4g35610                             --------->YAB1
         ----------------->AGL3   <---------At4g35610                <----------ID1--------->ARR11(3)
     <---------ANAC58  --------->AHL20(2)  <------MYB83        --------->YAB1    <---------YAB1
     <---------ANAC58  <---------AHL20(2) --------->MYB59    <---------YAB1     <---------TOE1(2)
---------YAB1       --------->WOX13(1) <---------REM1(1)  <---------YAB1        <---------TOE2(2)  -
 
agattatagcttaccgaaaatagcaattaaacgtgtgagatgatgtaggtatacattggtttttattaataaacgactaatcgtatgatatttcttcaaa  5676600
               --------->ATHB12                                                     <------ZmHOX2a(2)
               --------->ATHB51                                                 <-------------------
      <---------ANAC58                     --------->YAB1                 --------->LBD16
      <---------ANAC46            <---------YAB1                        <---------LBD16
      <---------ANAC58     <---------AHL20(2)                         <---------ARR14(2)   <--------
      <---------AtLEC2     --------->AHL20(2)                        ======================HOX2a_HOX2a
--------->DAG2<---------YAB1   <---------AHL20(2)                    <------ZmHOX2a(1)    --------->TOE2(2)
--------->DOF2<---------AHL20(2) <---------TOE2(3) --------->At4g35610--------->ARR14(2)  --------->TOE1(2)
 
aaaaaagttgcatggatattattggacaaattatataatgttagaatcatacacagttgaaactacattttaggacccgggtttacgatcaaacctaggg  5676700
                            <---------ICU4                                                       ---
                            <--------HAHB4                                                       <--
                            --------->ATHB12        ---------->DOF2                   --------->YAB1
                            --------->ATHB51 <---------AHL20(1)                 <---------ARR11(3)
                           --------->ICU4    --------->AHL20(1)        --------->ALFIN1          ---
                       --------->ANAC58      --------->ARR11(3)       <------ZmHOX2a(1)         <---
                       --------->ANAC46     --------->AHL20(2)  <---------AHL20(2)    --------->AHL20(2)
                     <---------DOF5.7(2)----------->TBP  --------->ZAT18        --------->ARR11(3)
                --------->DAG2        <----------DOF2--------->DAG2   ==================HOX2a_HOX2a-
--WRI1 ----------->GT1 --------->ANAC58 --------->AHL20(2)     <---------AHL20(2)------------>CBF<--
-STY1(1)       ---------->DOF2<---------YAB1<-----------TBP    --------->AHL20(2)<------ZmHOX2a(2) -
 
acaattcaaattgtagaataaagtaaacgcattattagcgactttaaatatatagaaaagtgcaaaataaataggaggggcaagatcaataaaacttctt  5676800
           <---------AtLEC2
          <-------TEIL
       --------->At4g35610
       <---------At4g35610                                    --------->ANAC46
------------>AGL15                                            --------->ANAC58
-------------AGL15                                            <---------ALFIN1
------>HSFB2a(2)                  *TSS            ----------->RAV1(1)
--------------AGL3        <---------DAG2       --------->ANAC46 --------->ANAC58
-------->AHL20(2)         <----------DOF2      --------->ANAC58 --------->ANAC46            <-------
-------HSFB2a(2)    --------->ANAC58           --------->ANAC58 --------->ANAC58         <---------AHL20(2)
---------->TBP      --------->ANAC58         ---------->DOF2  --------->ANAC58   ---------->DOF2<---
 
ctataaatagagctgcatgggggaagacactttatcacatccaaaaccaaaagcaacacaaacacacacaccaaaaaaaaaaaaaaaagcatttactttt  5676900
                                                   <---------ANAC46                         <------MYB83
                ---------->DOF2               ------>ZmHOX2a(2)                             <------MYB46(1)
    --------->YAB1                          <---------ARR11(3)                          <---------At4g35610
  --------->ANAC58    --------->MYB46(3)    --------->ARR11(3)                          --------->ZAT2
  --------->ANAC58 <----------ID1        <---------WOX13(1)    <---------AtMYB61        <---------ZAT2
---DOF2      --------->YAB1 <---------ANAC55(2)    <---------ANAC58                     --------->At4g35610
--------GT1  --------->TOE2(3)----------->HVH21    <---------ANAC58                   <-----------RAV1(2)
 
aactcaagcatggcaatgttaaagaacaaacacatgaccgtctcattgatcttggtgtgtctcgttgtggtgtctccaatggctgaggctcagcttggtc  5677000
                                                               <---------AtMYB61
                                                             <---------MYB46(3)
                                                             <------MYB83
                                                             <------MYB46(1)
                                                            <---------DEAR3(1)
                                                            --------->MYB111(2)
                                                            <---------AtMYB61
                                                            --------->MYB111(1)
                                                            --------->MYB55(2)
         <---------AtMYB61               <---------ANAC58   --------->MYB46(2)
       <---------MYB46(3)                <---------ANAC46   <---------MYB46(3)
      <---------AtMYB61      <---------ANAC58              <---------MYB55(1)
      <---------ZAT6         <---------ANAC58       <---------MYB46(3)            --------->TOE2(3)
      --------->ALFIN1      <---------LBD16        <---------AtMYB61           --------->ARR14(2)
 <---------MYB46(3)    <---------YAB1    <---------ANAC58  <--------P     <---------ANAC46        <-
<---------AtMYB61 <---------AtMYB61 <-----------RAV1(1)   <---------MYB52(1)   <---------ARR14(2)<--
 
ttggtggtagtggtggtcttggtggtcttattgggggtcttgttgggggtctcggtggtctggttggtggtcttgtagggggtattctcaatctcgtcaa  5677100
                                 >>>>>>>>>>>>>>>>>LFY
                              <---------At4g35610
       <--------P         <---------ATHB12                          <---------At4g35610
      <-------GAMYB       <-----------RAV1(1)           <----------DOF2                            -
--------YAB1<----------DOF2   <---------ZAT18  <---------ALFIN1     --------->At4g35610     <-------
-------ARR11(3)    xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)------>ZmHOX2a(1)<----------DOF2<----------DOF2
 
tatcaatggggttgtcttttgctctctcaatggtgctcccagtggcacttccactcctgctttcgctagtaagctttccattcttctactttcacctttg  5677200
              ------>MYB83                              <-----------RAV1(1)
    --------->AtLEC2            <---------TOE1(2)  <------NtERF2
    --------->ANAC58            <---------TOE2(3)<---------ANAC58                            <------
    --------->ANAC58         <---------ANAC46    <---------ANAC46                            -------
  --------->YAB1             <---------ANAC58    <---------ANAC58                           --------
 <---------ATHB12       <---------ICU4       =======================RAV            --------->YAB1
-------->WOX13(1) ----------->RAV1(1)   <---------MYB52(1) <---------REM1(1)      <<<<<<<<<ARR1    <
---DOF2       ------>MYB46(1)<---------ANAC58<-----------RAV1(2)                  <<<<<<<<<ARR2 <---
 
atcaatcatgcaaaaccagcccaacaaaaattgcttaggttctgttaaccaggcgggttttgttgtagattatgtcaaatatacaatcgtacaaatgata  5677300
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AGI:  At3g16660.1   
Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G16670.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44793.1)
Range:  from: 5676835    to: 5677927    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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