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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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    ----------->GT1
   ------>ZmHOX2a(2)
  <------ZmHOX2a(2)
 --------->ARR14(2)
 --------->ARR11(3)
 <---------ARR11(3)
 <---------ARR14(2)
 <---------ARR14(3)
 --------->AGP1                                                        <---------ICU4
 <---------AGP1                                                --------->AHL20(2)
--------->GLK1(1)                                   <-----------GT1   ------>ZmHOX2a(1)
<---------GLK1(1)                     <---------GLK1(2)   <---------ATHB12
-----LBD16                --------->AtLEC2       <---------MYB46(3)  <---------MYB59           <----
 
cggagatctgtaaaaacaactcttcatccatacaaaaaccagaatcacccatttgttacaaatcaaaaaattcctaatttcaacaatagaatgttagatt  5667400
                                                                        --------->LBD16
                                                                   <---------At4g35610
                                                                   <---------ZAT2
                                                                   --------->At4g35610
                                                            <---------------AtSPL8   <---------At4g35610
                                  <---------ARR14(2)        <---------------AtSPL3 --------->REM1(1)
                                  --------->ARR14(2)       --------->GLK1(1)    <---------ANAC58----
                            <---------ARR14(2)            --------->ARR14(2)    <---------ANAC58<---
                            --------->GLK1(2)         --------->At4g35610------>NtERF2    ------>ZmHOX2a(1)
                            --------->ARR14(2)     ---------->DOF2 --------->ZAT2  <---------ALFIN1
---TEIL             --------->ALFIN1      --------->ANAC46<---------ARR14(2)<----------DOF2     ----
 
caaatcgaagagaaactcacaatgtggagagaattcggattcaacacagaacatgaaagcggaaatgtacagctcccgactttgcttcacctccttcaaa  5667500
                                                                                               -----
                                                                                       --------->ANAC58
                                                                     <---------HSFB2a(2)     -------
                            --------->YAB1                           --------->HSFB2a(2)  --------->MYB52(1)
              --------->AHL20(1)                               <---------ICU4          --------->ANAC55(2)
              <---------AHL20(2)                               --------->YAB1          --------->ANAC55(1)
             --------->AHL20(2)                                -------->HAHB4          <---------ANAC55(2)
         <---------ATHB12   --------->ATHB51                   --------->ATHB12        --------->ANAC58
       --------->WOX13(1)  <---------ATHB12            ---------->DOF2                 --------->ANAC46
----->ARR14(2)<---------AHL20(1)           <------ZmHOX2a(2)  --------->ICU4        --------->ARR14(2)
------ARR11(3)--------->AHL20(2)          --------->ARR11(3)  <---------ATHB12      <---------ARR14(2)
----->GLK1(2)<---------ATHB12             <---------ARR11(3)  <---------YAB1      ----------->ARR10
 
atctgaaattcaatcaataaattgcatccaataatcggagaagaagatcgatgttatccaaagtaatgattaccagaaggaaacgaagacacgcaacggt  5667600
                 ------>ZmHOX2a(2)
                --------->CCA1(2)
                <------ZmHOX2a(2)
               <---------ARR11(3)
               <---------AGP1
               --------->AGP1
               --------->ARR11(3)
               --------->ARR14(2)
               <---------ARR14(2)                <---------O2
              <---------GLK1(1)                  <---------TGA1a
          ------>ZmHOX2a(2)                      --------->TGA1a
         <------ZmHOX2a(2)                    --------->TOE1(2)
         --------->CCA1(2)                    ----------->HVH21
        <---------ARR11(3)                   ------>ZmHOX2a(2)
        --------->ARR11(3)                   --------->DEAR3(2)
        --------->ARR14(2)                  --------->CCA1(2)
        <---------ARR14(2)                  <------ZmHOX2a(2)
        --------->AGP1--------->ARR11(3)   --------->AGP1                           <---------ANAC58
        <---------AGP1<---------GLK1(2)    <---------ARR14(2)            ------->TEIL
       --------->GLK1(1)                   --------->ARR14(2)         --------->ANAC58
  --------->CCA1(2)   <---------ARR11(3) ----------->ARR10          <-----------GT1 <---------ANAC58
---->ALFIN1   --------->GLK1(1)         --------->YAB1<---------ZAT14 --------->ANAC58    <---------ZAT6
>GAMYB <---------GLK1(1)   <-----------GT1--------->At4g35610--------->TOE2(3)      <---------ZAT6
 
gttagataagagatctgagatctgagattttcacaatatacaatcagatccgacgagtgaagaaccctaatttacgcacatcgaatagcgttagagatag  5667700
                                                              --------->MYB46(2)
                                                              --------->MYB52(2)
                                                            <---------MYB52(1)
                                                           <-----------HVH21
                                                          ================================bZIP_DOF
                                                          <---------TGA1a
                                                          --------->TGA1a
                                                          <---------O2
                                                          =========================================MYC_MYB
                                                     --------->ANAC58
                                                   <---------MYB52(1)
                                                  --------->LBD16
                                                 <---------ANAC58
                                                 <---------ANAC58
                                                 <---------HSFB2a(2)                       <-------GAMYB
                                                 --------->ANAC55(2)                      <---------ANAC58
                                     <-----------GT1 --------->ANAC58                     <---------ANAC58
                       --------->GLK1(2)         --------->HSFB2a(2)                      <---------DEAR3(1)
                     <---------At4g35610         <---------ANAC55(2)           ---------->DOF2     -
                    <---------ARR11(3)           <---------ANAC46  <------NtERF2     --------->ALFIN1
                    --------->ARR11(3)   ---------->ID1   --------->O2   --------->CCA1(2)<---------ANAC46
 
agagatagagagatagagagagagagcttctgttcaaaattttcgtcttcttccgtaagcgacgttaggcgcagagagatgagaaagagaggggcgttga  5667800
        *TSS                                                                      --------->ARR11(3)
        ---------->DOF2                                                           <---------ARR11(3)
    ----------->HVH21              --------->AHL20(2)                           --------->MYB59
  --------->CCA1(2)            --------->AHL20(2)                             <---------MYB52(1)
 <---------ARR11(3)            <---------AHL20(1) ----------->GT1            <-------GAMYB
 --------->ARR14(2)            --------->AHL20(1)--------->ALFIN1        ------------>AtMYB77
 <---------ARR14(2)            <---------AHL20(2)----------->GT1        ----------->HVH21
 --------->ARR11(3)       ------------>CBF    <---------TOE2(3)      --------->DAG2      <----------DOF2
---------->ARR10--------->ANAC46   <---------AHL20(2)               ---------->DOF2<------ZmHOX2a(2)
 
agaagatttgacaaagtataagacacttacacaataaattaaaaagtttgaggtgtttaaaagttttttaaaaaagtgacagttagatcaccctttaact  5667900
                                    --------->ZAT14
                                    <---------ZAT14
                                <---------------AtSPL8
                               >>>>>>>>>ARR1
                             <---------TOE2(3)
                             <---------TOE1(3)                                                  ----
                       <----------DOF2                                                      --------
                    ------>ZmHOX2a(1)                                                     <---------HSFB2a(2)
                 ---------->ID1>>>>>>>>>ARR2                                        <---------AHL20(1)
        <---------At5g28300  <---------YAB1                                        <---------CCA1(2)
       <-----------GT1 <---------DAG2    --------->ZAT14             <----------DOF2--------->ARR11(3)
 
tcagaaatattcaccgatttgtcctactttttaagattgtacagtctagtccaaaacatttgaaacaatcttctttgaacggtcttatatattctaaaag  5668000
                            ==================HOX2a_HOX2a
                           <------ZmHOX2a(2)
                          --------->ARR11(3)
                          <---------ARR11(3)
                    <---------At4g35610
             <---------YAB1===================HOX2a_HOX2a
            <---------AHL20(1)
            <---------AHL20(2)----------->HVH21       ----------->GT1
          <---------AHL20(2)------>ZmHOX2a(2)     -------->P
<---------ZAT6      --------->At4g35610           ------>MYB46(1)                               ----
----->ARR11(3) <---------AHL20(2)      <------ZmHOX2a(1)                   <---------TOE2(3)   -----
-->DOF2   <---------YAB1----------->ARR10         ------>MYB83 --------->AHL20(2)           --------
 
atagtgttgaaatattatttttttgctgagatcgtgacacaaggacatataccaacatggtgacataaaaatagaattgatgttctcatcttgaatcata  5668100
                                                                                        <--------P
                                                                                       <-------GAMYB
                     --------->At4g35610                                              <------MYB46(1)
              <---------DAG2                       <---------AHL20(2)                 <------MYB83
              <----------DOF2                     --------->AHL20(2)                 <---------MYB46(3)
             --------------->AGL15               <---------YAB1                --------->TOE2(3)
             <---------------AGL15         ----------->GT1             --------->YAB1--------->MYB55(2)
    ------->TEIL     <---------At4g35610   <------MYB46(1)             <---------AHL20(2)
----->ANAC46 <---------DAG2                <------MYB83                --------->AHL20(2)          <
---->SPL7   ----------------->AGL1       <---------WOX13(1)         --------->YAB1  <---------ANAC46
->YAB1    <---------CCA1(2)            --------->ATHB12    ----------->GT1  <-----------GT1     <---
 
cggtatgaatctcatacctttttgagcagattgcataaacattgattggtttattatatatgtagtataactaataatataaccttggtgggttgatcag  5668200
                                                    <-----------------AGL1
                                    <---------TOE1(3)                                          <----
                           <---------TOE2(3)        ----------------->AGL2                     -----
            <---------GLK1(2)       <---------TOE2(3)                                       <------ZmHOX2a(1)
  <-------TEIL         <----------DOF2         --------------->AtSPL8                    --------->LBD16
---------ANAC46        <---------DAG2  --------->ARR11(3)   --------->YAB1              <---------TOE2(1)
------MYB52(1)    <---------At4g35610 <------ZmHOX2a(1)    <---------TOE2(3)            <---------TOE1(1)
 
ttatgtgcattttcagattttagctactttatggtatttaaggatgttgttttggaccatctatggtaatagagatgaaatttgaaattgtccgaggaag  5668300
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AGI:  At3g16630.1   
Description:  ATKINESIN-13A/KINESIN-13A; microtubule motor. similar to kinesin motor family protein [Arabidopsis thaliana] (TAIR:AT3G16060.1); similar to central motor kinesin 1 [Gossypium hirsutum] (GB:AAQ18797.1); similar to internal-motor kinesin [Nicotiana tabacum] (GB:AAZ79373.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74575.1); contains InterPro domain Kinesin, motor region; (InterPro:IPR001752)
Range:  from: 5662390    to: 5667809    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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