Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     <-                                                                                               <-----                                                                                               <-----                                                                                          --------->ATHB12                                                                                         --------->ICU4 -------->KAN4(1)                                                                  --------->AHL20(2) --->ANAC46                                                                       <---------AHL20(2) --->ANAC58                                                           --------->ANAC46   <---------YAB1 ----ANAC55(2)              <---------TOE1(2)                        <---------TOE2(3) --------->YAB1 --->ANAC58               <----------DOF2            <---------DEAR3(1)           --------->AHL20(2) --->ANAC55(2)          ------>ZmHOX2a(1)     --------->AHL20(2)    <-----------GT1<---------AHL20(2) ---LBD16    --------->ARR11(3)               <---------AHL20(2)  <---------AHL20(2)   <---------ICU4 ----GT1    <---------CCA1(2)             <---------YAB1          --------->AHL20(2)  --------->ICU4   gaatattgtatgatatatctagtctcctctttggttctaaacttctaattaatcttcggtgatttgaattaaacgttactgtttttaaattatgattaag  5579000                               --------->YAB1                               --------->TOE1(3)                               --------->TOE2(3)                             <-----------ARR10                             <---------ARR11(1)                             --------->ARR14(2)                             <---------ARR11(3)                            <---------ARR14(1)                            <---------CCA1(2)                            ------>MYB46(1)                            ------>MYB83                          <---------MYB59                    --------->YAB1                    <--------ATHB1                    <---------ICU4                    --------->ATHB51                    <--------HAHB4                   <---------ATHB51                                    <-----------RAV1(1)           <-------TEIL<-----------GT1                             <---------AHL20(2) ---------DOF2     <---------ATHB12      --------->YAB1         ------->TEIL                   <----- ----TOE2(3)       --------->ICU4 <-----------GT1            ----------->GT1           --------->TOE2(3) ----TOE1(3)       --------->AHL20(2) --------->WOX13(1)<------ZmHOX2a(1)              <----------DOF2   gctttaaaacatgttcatacaataattaccaaatcttaaccaattagactcttaataaggagaacgtatatatatgttgcaacttgcaactttagccctt  5579100          <---------------AtSPL8          --------------->AtSPL3       <---------AHL20(2)                                             ------>NtERF2       --------->AHL20(2)                                          --------->ZAT2                  --    <---------ICU4                       <---------AHL20(2)        <---------ZAT2          ------->GAMYB   --------->AHL20(2)                    --------->AHL20(2)        --------->At4g35610    --------->ANAC46   <---------AHL20(2)          <-----------GT1                     <---------At4g35610    --------->ANAC58   --------->ICU4        <---------WOX13(1)                     <---------ANAC58          --------->ANAC58   <---------ATHB12   <---------YAB1   <----------DOF2          <---------ANAC58        <---------ATERF1(1)   <---------ATHB51--------->GLK1(2)--------->GLK1(2)    --------->AHL20(2)            <---------WRKY38(1) -----DOF2--------------->AtSPL8   <---------GLK1(2)    <---------ATHB12               <---------WRKY12   tacaaataattaatcgtacataatctaattgataaacgattctttaaattttaaaacaatgaattagcttgctgccatcgtttaatgggccaacgccaat  5579200                                                --------->YAB1                                               <---------YAB1                    <---------ANAC58                                              <-----------GT1                   <-------TEIL                                           <---------AHL20(1)                 --------->TOE2(2)                                           --------->ARR11(3)                 --------->TOE1(2)                                           --------->AHL20(1)               ------->TEIL                                           <---------ARR11(3)         ------->TEIL              ----- -------->DOF2                           ------->TEIL          --------->AHL20(2)<---------ANAC58  <-   ataaagacgattagttgagaagttgtgcaagtagaagtatatgaatattttcattatctaaaaaaaaaaatgtatatgaacatgcgtttttcccagtaat  5579300                                        <---------ICU4                                        -------->ATHB1                                        --------->YAB1                                       <---------ATHB51                                       --------->ICU4                                       <---------AHL20(2)                                       --------->AHL20(2)                                    --------->AHL20(2)                                    <---------AHL20(1)                             ---------->DOF2       <---------AHL20(2)  --------->ANAC58       ----------->TBP     --------->ANAC58       --------->AHL20(2)  --------->ANAC46     ----------->TBP       <---------ANAC55(2) <-----------GT1                              <--------   --------->AHL20(2)   <------ZmHOX2a(2) <---------YAB1                                    *TSS----- <-----------TBP  --------->O2      <---------AHL20(2)                  ------------>CBF    --------- ---->ICU4        <---------O2      --------->AHL20(1)          <---------------AtSPL3------------>CBF ---------DOF2    <---------ANAC46 --------->AHL20(2) <---------YAB1    <------ZmHOX2a(2)   ---------   gctttttatataaatatgcctcgtggatcacgaaagaataaattattatttcccttattatttcatctagtacgatcaatatcaagaagtcaatataaat  5579400                                                                                              >>>>>>>                      --------->YAB1                                                       ----------                     <---------YAB1                         <---------CCA1(2)         --------->ICU4 -AHL20(2)       <---------WOX13(1)                     <---------ARR11(3)       <---------ANAC55(2) ---->AHL20(2)<---------YAB1                            --------->ARR11(3)--------------->AGL15 >AHL20(2)    <---------AHL20(2)                    ---------->DOF2       <---------------AGL15 -->TBP     <----------DOF2       --------->YAB1<----------DOF2--------->ZAT6    ----------->GT1   aaacatacaattcactttaattgatcatagcaccgataacaatctactctctttaaaaggtcttatctctattcttctctattatgtaaaaattggttaa  5579500                 <---------YAB1               --------->AHL20(2)               <---------AHL20(2)              --------->AHL20(2)              --------->AHL20(1)              <---------AHL20(1)   --------->ARR11(3)                                                                               -   <---------ARR11(3)                   <---------TOE1(2)               --------->DAG2             -- >>GT-1       <---------AHL20(2)    <-------TEIL                      ---------->DOF2       ========= ->GT1  <-----------GT1   --------->MYB46(3)           --------->At4g35610 --------->ALFIN1 ---------   tagtagatattaacaatttatttttgcaactacagaaattcgtaagtactatcaagaagcagaagatggcccaaaaggtggaagcacaaggagggaaagg  5579600                                   ----------->HVH21                                <------NtERF2                     --------->ANAC58                               ------>NtERF2                      --------->ANAC58                              <---------bZIP60(1)           <<<<<<<<<<AtWER                              --------->bZIP60(1)         --------->ANAC58                           ----------->HVH21           <---------At4g35610                           ----------->TGA1            <---------ZAT2                         <---------ANAC55(2)           --------->At4g35610  -------->P             --------->ANAC55(2)           --------->ZAT2  ------>MYB46(1)        --------->TGA1a           --------->ANAC58  ------>MYB83           <---------O2              --------->ANAC58  =================================MYC_MYB      --------->ZAT2    --------->ANAC46 -------->DEAR3(1)       --------->O2           <---------ZAT2   <---------LBD16 ------->ATERF1(1)  ------>ZmHOX2a(2)           --------->At4g35610                        <---------ICU4 ==================================bZIP_DOF     <---------At4g35610   --------->GLK1(1)<---------YAB1 ->DOF2           --------->ARR14(2)         <-------TEIL --------->ANAC58   <---------ARR11(3)     -   agccaacctatgggacgatggatcgacacatgacgccgtgaccaagattcagctcgcagcaggcatagacggaattcaatatgttcagtttgattatgtc  5579700                                                                <---------ARR14(2)                                                                --------->ARR14(2)                                                               <---------MYB52(1)                                                              --------->LBD16                                                            ------>ZmHOX2a(2)                                                        ----------->HVH21                                                      --------->ZAT2                                                      <---------At4g35610                                                      ----------->RAV1(2)                               <---------SPL7         --------->At4g35610                       ------>ZmHOX2a(1)  <---------ANAC46  ===============HOX2a_HOX2a                 --------->ANAC58         <---------ANAC58<---------ARR14(2)                 --------->ANAC58   ---------->DOF2   <---------ZAT2------>ZmHOX2a(1)          xxxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) <-----------RAV1(2)   <-----------GT1        -------->P     <---------------AGL15 --------->ZAT14<---------LBD16  <---------ANAC58 -------->MYB52(1)    <---------ALFIN1    <---------ANAC58--------->ARR14(2) <---------ANAC58    <---   aagaacggacaacccgaacaagctcctcttcgtggtaccaaaggccgtgttctcccagctgatccggttcctatattttccttgcccattaatcttcttc  5579800                                                                            --------->HSFB2a(2)                                                                            <---------HSFB2a(2)                                                                          ------>MYB46(1)                                                                          ------>MYB83            ----------->GT1                                             ------->GAMYB        --------->ZAT14                                <-----------GT1 --------->MYB46(3)        <---------ZAT14                         ------>ZmHOX2a(2)    <-----------GT1 --------->ARR11(3) -------DOF2<---------ZAT6     <-----------GT1<---------ARR11(3)<---------YAB1     ------->TEIL   tttctatatgtatactgttatattttgaagttttgacattttcatcttgatctatttctacagtttgtgattaaccatccagacgaacatctagtttctg  5579900  Previous    Next  AGI:  At3g16420.1    Description:  PBP1 (PYK10-BINDING PROTEIN 1). similar to jacalin lectin family protein [Arabidopsis thaliana] (TAIR:AT3G16430.2); similar to jacalin lectin family protein [Arabidopsis thaliana] (TAIR:AT3G16430.1); similar to jasmonate inducible protein [Brassica napus] (GB:CAA72271.1); contains InterPro domain Mannose-binding lectin (InterPro:IPR001229) Range:  from: 5579392    to: 5580959    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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