Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          <-------PIF5                                                        ------->MYC2                                                        <-------MYC2                                                        ------->MYC3                                                        <-------PIF4                                                        ------->PIF4                                                        <-------MYC3                                                        <-------MYC4                                                        ------->PIF5                                                        ------->MYC4                                                       <---------ANAC46                                                       <---------ANAC55(2)                                                       --------->TGA1a                                         --------->DOF5.7(2)    <---------ANAC58                                   --------->DAG2      <---------O2                                  ---------->DOF2      <---------TGA1a     --------->ANAC58 --------->ANAC46            ----------->GT1           --------->O2  --------->At4g35610       <----- -->ANAC58            --------->LBD16    <---------MYB52(1)     <---------ANAC58      <---------ARR14(2) -->ANAC58            <---------------AGL15<---------DOF5.7(2)  <---------AtLEC2      --------->ARR14(2) ->DOF2          <-----------GT1  ===============================bZIP_DOF  --------->ANAC58   -------   aatactccattagagtttttttcccccaaaatggagaaaagtcgttaactatttggcacgtgtattgcatgagcaccaagtaagtctaaatctgcattaa  5342800                                                         --------->TOE2(3)                                                        <---------YAB1                                                 <-------GAMYB     --------->TOE1(2)                          <---------ANAC46    <---------HSFB2a(1)                    <---------ANAC58    --------->HSFB2a(1)                    <---------ANAC58                    --------->ZAT18   ----------->ARR10                       --------->ANAC55(2)                 <---------ZAT18   ---------->TaMYB80                     <---------TOE2(3)                  <---------ZAT18   <---------KAN4(2)                   --------->DOF5.7(2)                ---------->DOF2        ---- ----AHL20(2)            <----------DOF2 <---------DOF5.7(2)              =========================== -->AHL20(2)            <---------DAG2<----------DOF2 <-----------GT1 <---------YAB1<---------AHL20(2)   atgcgaacatccgagtcgacttaacaccttttgatcaaggctttaacgtgtcgttgttaccatagaatatagatgatagagcgcattttatatcactgga  5342900        ----------->GT1        <---------MYB46(3)      ------->MYC4      ------->MYC2      ------->MYC3      ------->PIF5      <-------PIF5            --------->MYB52(2)      <-------MYC3          <---------MYB52(1)      <-------MYC4         <-------GAMYB      <-------MYC2        --------->MYB111(1)     <---------TGA1a      --------->MYB55(2)     <---------O2  <------------CBF     --------->TGA1a      <---------MYB46(3)     <---------ANAC55(2)  --------->MYB111(2)     ===========================MYC_MYB                             <---------ARR14(2)             <-     --------->ANAC55(2) <--------P                              --------->YAB1                ------     --------->O2 --------->ATHB12                          <----------DOF2             ----------->GT1     =============================MYC_MYB             --------->ANAC46              --------->HSFB2a(2)     ===========================MYC_MYB               --------->O2  --------->ARR14(2)<---------MYB52(1) ----->CCA1(2) --------->TOE2(3)            <---------At4g35610 <---------YAB1      <---------HSFB2a(2) ==============bZIP_DOF <-------GAMYB <---------MYB46(3)    <---------DAG2         <---------ANAC46--   tatagacacgtggttaaacttaattgggttgttagttaagttgttgtgctacctccaagtgactttatcatatactctgtgtgtttctggtagtaaaaaa  5343000                                                                                       --------->YAB1                                                                                      <<<<<<<<<ARR2                                                                                      <---------ATHB12                       ------------------------>ANAC81                              --------->WOX13(1)                      ---------->DOF2                                             ------------>CBF        --------->TOE2(3) <----------ID1                                        <---------ETT(1) --------ARR11(3) --------->ANAC58                                          <----------DOF2    <----- ---->DOF2   <---------ZAT6   ---------->DOF2                              <---------ANAC58   <------ ------->ARR11(3) --------->ANAC58    --------->At4g35610                  <---------ANAC58   -------   aggtctaaaaccatagtgttaagcaaaagagaaaaagaagagcagagcaaaatccctaaaattttaaactctgttttgctttccgacaatcaaaccctag  5343100        <---------ANAC58                                             <----------DOF2        <---------ANAC58                                       <---------WOX13(1)     <---------MYB52(1)                                        <--------P    <---------At4g35610     <---------AHL20(2)                <-------GAMYB    <-------GAMYB----------->GT1     <------------------------ANAC81------>ZmHOX2a(2)          ------   <---------MYB46(3)   ----------->GT1         <---------ANAC58  --------->ARR11(3)      <--------P   <-----------RAV1(1)<------------CBF          <---------ANAC58  <---------ARR11(3)    <---------MYB46(3) ----TOE2(2)   <---------ANAC58 <---------AHL20(2)           <---------MYB46(3)       --------->LBD16 ---STY1(1)    <---------ANAC58 --------->AHL20(2)          <---------TOE2(3)       <---------LBD16 -->STY1(1)    <---------ANAC46 --------->AHL20(1)        <-----------RAV1(1)       <-----------RAV1(2)   gttgtctgttgcttcattcgtgtaaattgttaaattttttgtttttgttttcttggcattttgtggttgatctttctaatttgttttcaggggttgctaa  5343200                           <------ZmHOX2a(1)                  <---------MYB46(3)                  <------MYB83                  ----------->GT1                  <------MYB46(1)                 --------->ALFIN1                 --------->ANAC46                 <---------DEAR3(1)            --------->MYB52(1)               <---------ANAC58                -------->P               <---------ANAC58             <---------At4g35610              <---------MYB46(3)            --------->At4g35610 ---------->DOF2 <---------AtMYB61     <-------GAMYB<---------ALFIN1 --------->ARR11(3)       ------- ---->DOF2 --------->CCA1(2)          <-----------RAV1(1)    <---------AtLEC2        <----------DOF2   agggaaaggagagagatgggtggtgaagaggaagttgtttctgttgagctaccagcaccttcttcatggaagaaattggtttgttttctttgtttcatac  5343300                                                   <----------DOF2                                             <----------DOF2                                          <---------ARR11(1)                                          <---------ARR11(3)                  <---------AtMYB61                                          <---------ARR14(2)               <----------DOF2                                          --------->ARR14(2)              <---------ANAC58                                         ------>MYB46(1)                  <---------ANAC58                                         <---------CCA1(2)             <--------P<---------DEAR3(1)                       <---------ZAT14   ------>MYB83               <---------YAB1                       --------->ZAT14   <---------ARR14(1)  <-----------------AGL3<------NtERF2 -->AtLEC2   ---------->ID1            <---------MYB59     --------->GLK1(2)  <-----------RAV1(1)   aaagacttagaatttgttgtatatgtgtagtgctgcaattaccaaatctttttctttgaagactctgaatatggtagcttttggtggcgaaatgttagta  5343400                        --------->ANAC55(2)                        <---------ANAC55(2)                        <------MYB46(1)                        <------MYB83                            >>>>>>>>>ARR2                       --------->MYB59                        <---------YAB1                       --------->MYB111(1)              ----------->RAV1(1)                   --------->ATHB12                  --------->ANAC58           <---------DAG2                            --------->ANAC58           <----------DOF2                           --------->ANAC46        <-----------GT1--------->MYB46(2)           --------->DAG2          ------>ZmHOX2a(2) ----------->GT1  <---------YAB1  <---------TOE2(3)---------->DOF2  <---------YAB1          <--------   taagtgtaaataactttatgttgattaggtgattcaaaggttatagacttagaaaaagccacatttgattgtgtttgatctactatttctacttctttgt  5343500                                                    --------->GLK1(2)                                                   <---------GLK1(2)                                               <---------LBD16                                           <----------DOF2         --------->ANAC58                <-                                           <---------DAG2          --------->ANAC58                <-                                 <-----------GT1   --------->ARR14(2)           <---------ICU4 ------                        <---------YAB1  <-----------GT1<---------YAB1          --------->ICU4 ------- --DOF2         <---------ICU4 <---------WOX13(1)--------->LBD16   --------->ANAC46          <-------TEIL   tcttgacttaatgcctcattttgactatgtttgatttacttcttacttttcccgattcttatggattttaagccacttgtaaacattgtttaagctacat  5343600       <----------DOF2 <---------ARR11(3) --------->ARR11(3)                                                        <---------ANAC58 --------TOE2(3) <-----------GT1                                           <---------ANAC46 --------TOE1(3)<---------AHL20(2)   --------->TOE2(3)                     <---------ANAC58      ---- --->TOE2(3)   --------->AHL20(2)    --------->TOE1(3)                  ------->GAMYB      <--------- -->REM1(1)    <---------AHL20(2)  ------->TEIL--------->YAB1     --------->TOE2(3)<-----------GT1  -   taaggtcttctttagaatttaatctttcagcgttttgaacctcaaattttcatattttcagaggtttacattaactgacttgtttttgcagttttacccc  5343700  Previous    Next  AGI:  At3g15790.1    Description:  MBD11 (methyl-CpG-binding domain 11); DNA binding. similar to MBD10 (methyl-CpG-binding domain 10), DNA binding [Arabidopsis thaliana] (TAIR:AT1G15340.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62732.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Methyl-CpG DNA binding; (InterPro:IPR001739) Range:  from: 5343216    to: 5344707    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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