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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                       <-------MYC3
                       ------->MYC2
                       <-------MYC4
                       ------->MYC3
                       ------->MYC4
                       <-------MYC2
                      <---------O2
                      --------->O2
                      <---------TGA1a
         <---------ATHB12     <-----------GT1
-------ZAT18          --------->TGA1a                                           --------->AHL20(2)
------>ZAT14          <---------ANAC55(2)                                 --------->AHL20(2)       -
-------ZAT14          --------->ANAC55(2)   --------->AtMYB61            --------->AHL20(2)       --
 
tgaactcatcccatcattcacttacacgtgttttttcttcttgacgaccaaaaaaaaacaatttggcacatacccattaaaaaaaaaatacttcttattt  5234200
                                                               <---------ANAC46
             <---------TOE2(2)                                 <---------ANAC58
          <---------ANAC46     <-----------GT1                 <---------ANAC58               ------
      <----------DOF2       --------->ANAC55(2)                <---------AtLEC2             <-------
      <---------DAG2        <---------ANAC55(2)       ----------->GT1                       <-------
   <-----------GT1         --------------->AtSPL8     <---------ANAC46                     <--------
 --------->YAB1<---------GLK1(2)       --------->YAB1--------->LBD16                  <---------ICU4
-------------------->WRI1<---------MYB52(1)       <---------At5g28300          <---------ZAT6 ------
------->YAB1 <---------TOE1(2) ------->TEIL      <-----------GT1         <-----------GT1   ---------
 
ttcataatacttttcgtagattgtcactgttatgtaactcattcatagaaatttaccgcgtaaattgcatgaaaaatcactagtcttaagaatcacctaa  5234300
                                                                                                   -
>MYB46(1)                                                                                      -----
--MYB59                         <----------DOF2                                                <----
--MYB46(2)                   <-----------GT1                                                   <----
-ANAC55(2)            --------->ANAC46 --------->ZAT14                                        <-----
>MYB83             <---------ARR14(2) <---------MYB52(1)                              --------->YAB1
>ANAC55(2)         --------->ARR14(2)<---------At4g35610           --------->YAB1--------->AHL20(2)<
 
tttgtttttctgaacttacaaatattcgcaaattactttcagttaactccctaatacttgggaagaccattgacaatacaaaaaaaaaatcataagagga  5234400
          --------->ANAC46
          --------->ANAC58
          --------->ANAC58
  <-----------HVH21                               <---------TOE2(3)
-------->ZAT14                                <---------DAG2           --------->MYB52(1)
---------->AtSPL3                             <----------DOF2         ==============================
-----------AtSPL3                      --------->YAB1                 XXXXXXXXXXXXXXXXXXXXX>MIR393A/B
-----------AtSPL8                 --------->AHL20(2)                  ---------->DOF2
-ZmHOX2a(1)            <---------ICU4 <---------AHL20(2)      ---------->DOF2            --------->ANAC46
-------TEIL       <-----------GT1 <---------AHL20(2)        <-------TEIL      ------>ZmHOX2a(2)  <--
 
ggtacagtcacacacacaatattacaacattactaatataaataatcaactttatggtataggttcaaagaaccaaagggatcgcataaatcacgacgct  5234500
                                                                       <---------ANAC46
                                                                       <---------DEAR3(1)
                                                                      <------NtERF2
                                                                      --------->ATERF1(1)
                                                                      <---------ABI4(1)
                                                                     <---------ATERF1(1)
                                                                     ------>NtERF2
                                                                     <---------DEAR4(2)
                --------->YAB1                                       <---------RRTF1(1)
               <---------YAB1                                        <---------RAP2.3(1)
         ------->MYC3                                                <---------ERF1<---------AHL20(1)
         <-------MYC3                                                <---------ORA47(2)
         <-------MYC2                                               <---------RAP2.3(2)
         ------->PIF5                                               <---------RAP2.3(3)
         ------->MYC2                                               <---------RRTF1(2)
         ------->MYC4                                               --------->ATERF1(2)
         <-------MYC4                                               <---------RRTF1(3)
         <-------PIF5                                               <---------DREB2C(2)
        --------->ANAC55(2)            <------------CBF             <---------RAP2.6(2)
        --------->ANAC46            --------->ANAC55(2)       <---------ARR14(2)   --------->AHL20(2)
        ============================bZIP_DOF            <---------TOE2(3)          <---------AHL20(2)
        --------->TGA1a          --------->PCF2      --------->DOF5.7(2) <------NtERF2     <--------
        <---------TGA1a         --------->TCP15(1) --------->ANAC58 <---------ATERF1(2)    ---------
        --------->O2            --------->TCP20    --------->ANAC46 <---------DEAR3(1)     ---------
        <---------O2            <---------PCF2     --------->ANAC58<---------ORA47(1)   <---------AHL20(2)
      <---------ALFIN1         ----------->HVH21  ------->TEIL<------------CBF     --------->AHL20(1)
     ------>ZmHOX2a(2)   ---------->DOF2         <---------ALFIN1  <---------ABI4(1)   --------->AHL20(2)
<---------WOX13(1)    --------->YAB1<---------ANAC55(2)<---------DOF5.7(2)----------->GT1-----------
==================bZIP_DOF--------->DAG2   <---------TOE2(3)  --------->ARR14(2) <---------YAB1 <---
-------YAB1    --------->ICU4--------->ALFIN1   <------NtERF2--------->ATHB12   --------->AHL20(2)
 
ctaattgatccacgtgtcatgataaacataaagtgggacccgtattgaggctgcacgttaacgaagattgggcggcggtgtaatattatattatatatat  5234600
                                                                                                <---
                                                                                                <---
                                                                                               <----
                                                                                               <----
                                                                                               -----
                                                                                               -----
                                                                                           <--------
                                                                                           ---------
                                                                                           <--------
                                                                                       --------->DAG2
                                                                                      ---------->DOF2
<-------TEIL             <----------DOF2                                         --------------->AGL15
-AHL20(2)                --------->TOE2(3)                                       <---------------AGL15
-->TBP                 *TSS                           ---------->DOF2    <---------WOX13(1)---------
>AHL20(2)             <---------ARR11(3)      ----------->GT1<---------ARR11(3)  --------->HSFB2a(2)
>TBP                  --------->ARR11(3)    ---------->DOF2  --------->ARR11(3)  <---------HSFB2a(2)
----TEIL --------->At4g35610         ------------------------>ANAC81  <---------YAB1--------->YAB1
 
acatacacgagtagcagagcttcgaaatctttaatctcagaatacaaaaaagaaaatcaaagaagatagttttgtgattgttttctataaaaagtgcaga  5234700
                                                                                   <----------DOF2
   <----------DOF2                                                              ------>NtERF2
<---------AHL20(2)                                                              --------->LBD16
------RVE1(1)                                                                  <---------ANAC46
------CCA1(1)                                                                 <---------LBD16
-----ARR11(3)                                            <---------MYB52(1)  ------>NtERF2
-----ARR14(2)                                           <-----------HVH21   --------->DEAR3(1)
---->ARR14(2)                                      <---------WRKY18(1)     --------->DEAR3(2)
---->ARR11(3)               <------ZmHOX2a(1)     ----------->HVH21        --------->MYB46(3)
-ZAT18                ----------->HVH21         <---------ANAC58          <---------At5g28300
>ZAT14         ---------->DOF2                  <---------ANAC58      <---------At4g35610
-ZAT14    ------>ZmHOX2a(1)----------->GT1    --------->ARR11(3)      --------->At4g35610
>ZAT18    <---------HSFB2a(2)                 <---------ARR11(3) --------------------->WRI1   <-----
 
tattttctttgtcctagagaaagaggtgataggaaaaatgggtctccaagagcttgacccgttagcccaattgagcttaccgccgggttttcggttttat  5234800
                                                 --------->ANAC58
                                                 --------->ANAC58
                                             <-----------HVH21
                                            <---------DEAR3(2)
                <---------MYB46(3)         --------->DEAR3(1)
               <---------YAB1            ------>NtERF2
               <---------AtMYB61         <---------ATERF1(1)
            ----------->HVH21           --------->DEAR3(1)             <---------At4g35610
          <---------At4g35610           --------->RAP2.3(2)            --------->At4g35610
  --------->MYB52(1)    --------->ARR11(3)<------NtERF2         --------->At4g35610
 ----------->TGA1<-------GAMYB         --------->RAP2.3(1)      --------->ZAT2
 ----------->HVH21      <---------ARR11(3)--------->ATERF1(1)   <---------At4g35610               --
------GT1 --------->At4g35610      ---------->DOF2              <---------ZAT2     ------>ZmHOX2a(2)
 
ccgactgacgaagagctgatggttgaatatctctgtagaaaagccgccggtcacgacttctctctccagctcatagctgaaatcgatctctacaagtttg  5234900
                                 --------->TOE2(3)
                           ------>MYB83
                           ------>MYB46(1)
                         <---------MYB59
                      <-----------GT1
                 <---------ANAC55(2)
                 --------->ANAC55(2)   ------->GAMYB
                 <---------ANAC46--------->TOE1(3)  <----------DOF2      <-----------GT1  <---------
            <---------------AtSPL3   <---------At5g28300  --------->STY1(2)             ---------->ID1
        <-----------GT1  --------->TOE2(3)    <------MYB46(1)     <---------YAB1    <---------ANAC58
---->ZmHOX2a(2) <-------TEIL  <-----------GT1 <------MYB83<---------STY1(2)         <---------ANAC58
 
atccatgggttttaccaagtacgtataacctaataaccttaaccgtgtttggtttctttgtagctagttatgtttttttctcttctaacttgtctttttg  5235000
                                                                                                  <-
                                                                                                ----
                                                                                               <----
                                                                                               <----
                                                                                               <----
                                                                                              <-----
                                                                                    ------>MYB83----
                                                                                    ------>MYB46(1)
                                                                           --------->WRKY18(1)<-----
             ----------->GT1                                              <-----------HVH21   ------
          --------->DAG2   ---------->DOF2                           --------->MYB52(1)    <--------P
      <------MYB83   <---------ANAC46     <-----------GT1     <---------HSFC1(2)  <---------MYB59 <-
<----------DOF2<---------MYB52(1) ----------->GT1             --------->HSFC1(2) ----------------->AGL1
-DOF2 <------MYB46(1)----------->GT1    <---------AHL20(2) <------ZmHOX2a(1)    <---------ARR11(3)--
 
gttctttgtaggtaaggcgttattcggtgaaaaagaatggtattttttcagcccgagggataggaagtatccaaacgggtcaagacctaatcgggttgcc  5235100
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AGI:  At3g15500.1   
Description:  ATNAC3 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 55); transcription factor. similar to ANAC019 (Arabidopsis NAC domain containing protein 19), transcription factor [Arabidopsis thaliana] (TAIR:AT1G52890.1); similar to NAC4 protein [Glycine max] (GB:AAX85981.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441)
Range:  from: 5234624    to: 5236095    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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