Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                      <---------bZIP60(1)                                                                                    --------->bZIP60(1)                           ------>NtERF2                                         ----------->HVH21                          <---------ALFIN1                                   ---------->DOF2           --------->At4g35610                               ------>ZmHOX2a(1)--------->DAG2           <---------At4g35610                     --------->TOE2(3)     ----------->GT1 -------->DOF2         --------->ALFIN1            <---------MYB59       <---------ANAC46 -------MYB52(1)   <---------YAB1   <---------ZAT18<---------DAG2       --------->MYB59          ----   cttaagctcgatgagctcattaagagtggcacctctactgctcttagcttctaccttactatccttcttacagtgaggtaaaagtgacaccatgttcaac  5215900                                             --------->YAB1         --------->ANAC58                                        <---------YAB1              --------->ANAC58          -------              ------>MYB46(1)    <-----------GT1       ---------->DOF2                        <------      <---------ETT(2)   <-----------GT1<---------ATHB12      <-----------ARR10      --------->ANAC46 ----->TOE2(3)------>MYB83  ---------->DOF2 <-------TEIL<-----------GT1  ----------->GT1      -------   atcaaatgtcgataccttccaacgaattaacaaagttactccatgattcataaccattaaaccgaatcaaacccaatgtaaatttcaacaccattcacct  5216000                             --------->HSFC1(2)                     --------->MYB52(1)                   <---------MYB52(2)                  <---------ANAC55(2)                  --------->ANAC58                  --------->ANAC58                             <---------TOE1(2)          <---------ANAC46   <---------HSFC1(2)             --------->ANAC58       ----------->HVH21     <---------HSFB2a(1)            --------->ANAC46      ------>ZmHOX2a(2)      --------->HSFB2a(1)         --------->ARR14(2)      --------->DEAR3(2)    <-----------ARR10         --------->ANAC58                      <-------- ---->RAV1(2)     --------->ANAC55(2)       ------>ZmHOX2a(1)  <---------TOE2(2)  --------->At4g35610 ---At4g35610     --------->ANAC46  <----------DOF2   --------->ANAC58           <---------ARR11(3) -->At4g35610     --------->ANAC55(1)       --------->LBD16 --------->ANAC58   <---------At4g35610   gaaattgatccgacgggaacaagtaacgagaaccttctctttattcctgaatacagacgcatacgcaggtttagagttctcagcatcttccttcttatct  5216100                                                         --------->At5g28300                                                       --------->RAP2.3(1)                                                      ------>NtERF2                                                     --------->RAP2.3(2)                                                     --------->ATERF1(2)                                                     --------->RAP2.3(3)                                                     --------->DEAR3(1)                                                     <---------ATERF1(2)                                                    <---------RAP2.6(2)                                                    --------->ORA47(2)                                                    --------->RAP2.3(1)                                                    --------->DEAR3(2)                                                    <------NtERF2                                                    --------->RAP2.6(1)                                                    --------->ERF1                                                   --------->ABI4(2)                                                   ------>NtERF2                                                   <---------ATERF1(1)                                                  --------->ARR14(2)                                                  <---------DEAR3(1)                                          <-----------HVH21                                          ------>ZmHOX2a(1)                                         --------->TOE1(3)----------->HVH21                                      --------->ARR14(2)--------->RAP2.6(2)                                      <---------ARR14(2)--------->RAP2.3(2)                                      --------->GLK1(2)<------NtERF2       ---------->DOF2               <---------GLK1(2)--------->LBD16    ------->GAMYB             --------->LBD16     ----------->HVH21  ------>MYB46(1)            --------->ANAC46     --------->ALFIN1  -------->P                <---------LBD16   <---------LBD16 ------->GAMYB  ------>MYB83  ------>ZmHOX2a(1)<---------At4g35610--------->ATERF1(1)              ------>ZmHOX2a(1) -CCA1(2)       <----------DOF2  --------->At4g35610--------->DEAR4(2)     <----------DOF2   ttccaacccaaaagagtcctttgaggtctctccggagcagaatccttcaccggtgccgccgtaacagtctcgctgtgctttctcttcctccccatttttt  5216200                                                                               <---------ZAT2                                                                               --------->ZAT2                                                                     ---------->DOF2                                                                 ---------->DOF2                                                               --------->TOE2(3)    <----------DOF2                                  <----------DOF2           ------->GAMYB --------->CCA1(2)                   --------->ANAC58   <---------TOE1(3)    <---------MYB111(2)--------->ANAC58                   --------->ANAC58   <---------TOE2(3)    --------->MYB46(3) --------->ANAC58          >>>>>>>>>TBF1  <---------GLK1(2)  <---------------AtSPL8  *TSS <----------ID1          <---   gtgtctattgaagaagaaacaacgctaaattctctgatttagggttttagtacaaaactcaacaacctaaagaaagagacaagctgctttaactaaaaat  5216300                                                                                     ---------->DOF2                                                                                 --------->AtLEC2                                                                                 --------->ANAC58                                   --------->ANAC58    <------ZmHOX2a(2)         --------->ANAC46                                   --------->ANAC58 <------NtERF2                --------->ANAC55(1)          <----------ID1           --------->ANAC46 --------->LBD16              <---------ANAC55(2)     ------->GAMYB        <---------DAG2          <---------LBD16                --------->ANAC58 --------HVH21            <----------DOF2 ------------>CBF             <----------DOF2   gtcacaacgaaaacgacaacgtttctcacttttatacaaggaatttcaatgggccggatcaagcttacatgggccttaatgacacgcaaaagaaactaca  5216400              <----------DOF2             <---------------AGL15             --------------->AGL15            <-----------------AGL1            ----------------->AGL1            <-----------------AG            ----------------->AGL3            ----------------->AG            <-----------------AGL3            <-----------------AGL2           <-----------GT1                                                                ------>ZmHOX2a(2)          <-----------GT1                             --------->ARR11(3)                <---------ARR11(3)        <---------HSFC1(2)                            <---------ARR11(3)                --------->ARR11(3)        --------->HSFC1(2)                           <---------CCA1(2)                 --------->YAB1        <---------HSFB2a(1)                <---------ATHB12                   --------->ZAT6        --------->HSFB2a(1)              --------->WOX13(1)      <---------ANAC58     <---------ATHB12  ---------->DOF2             <----------DOF2   --------->YAB1   <---------ANAC58   --------->YAB1   ttgcaaaagaattttccttttttggtttctctctttctatttccaatcaataaacatatctctctgttcgtgtgtctgtaactctacaatgatctgtata  5216500                                                                                      --------->YAB1                                                                                   --------->YAB1                                          ----------->GT1                         --------->ZAT6                                       --------->GLK1(2)                        --------->MYB52(1)                                       <---------ARR14(2)                     <---------MYB52(2)                                       --------->ARR14(2)                    <---------At4g35610                              <---------HSFB2a(2)                            --------->ZAT2                              --------->LBD16                         --------->DAG2  <--------ATHB1               <-----------GT1------>ZmHOX2a(1)             <----------ID1   <---------ZAT2    ------          <----------DOF2     --------->HSFB2a(2)           <------ZmHOX2a(1)--------->At4g35610  <----------DOF2            <---------LBD16    ---------->DOF2      ---------->DOF2 <---------ATHB51   gtttctttctctctttttttctctccattttcctggaaacaaatctgtaacaaagaagaataggaacaaaaaaaagctcagctaacaataatacaaacct  5216600                                                                          <---------CCA1(2)                                                                         --------->ARR14(2)                                                                         <-----------ARR10                                                                         <---------ARR14(2)                                                                         <---------ARR11(1)                                                                         ------->TEIL                                                                        <---------CCA1(2)                       --------->ZAT14                                  <---------ARR14(1)                     --------->ZAT14                              --------->HSFB2a(1)          ------                     <---------ZAT14                              <---------HSFB2a(1)      <---------ZAT14               <---------ALFIN1      --------->ARR14(2)      --------->HSFB2a(2)           --------->ZAT14       <-----------GT1 <---------ZAT14                ---------->DOF2<-------TEIL----------->RAV1(2) --->TOE2(3)<-----------GT1          <---------ARR14(2)      <---------HSFB2a(2) ------>ZmHOX2a(1) --   cactcgatttttcttcaccactctgtacagtttttatcaaatccgaatgggcaaaccaaagttctgaaacgttcgtatctctcctctgagacctgcagtg  5216700                                                                                                -----                                                                                                -----                                                          --------------->AtSPL3       <---------ANAC46                                                        <---------ARR14(2)             <---------ANAC58           --------->LBD16      --------->LBD16         --------->ARR14(2)             <---------ANAC58    <---------YAB1            ----------->RAV1(2)      --------->GLK1(1)              --------->MYB52(2)  --------->YAB1        <-------TEIL <-----------GT1   <---------GLK1(1)      --------->TGA1a-------- --------->MYB46(3)   --------->ARR14(2)           ----------->RAV1(1) <---------ARR14(2)    -------- ----->HVH21   ---------->DOF2<---------LBD16      ------>NtERF2       --------->ARR14(2)--------->AtLEC2 ------->WOX13(1)     <---------ARR14(2)    ----------->HVH21 --------->SPL7<---------ALFIN1 --------   acaatcaccattccccaagaagccgatacattccctgagtttccatttgacgacgacatatccgtactcagacgattcccacttctgttccttgcaaaca  5216800  Previous    Next  AGI:  At3g15460.1    Description:  brix domain-containing protein. similar to brix domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G52930.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61504.1); contains InterPro domain Brix (InterPro:IPR007109) Range:  from: 5214091    to: 5216268    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g15470.1    Description:  WD-40 repeat family protein. similar to WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT5G54200.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39239.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680) Range:  from: 5216269    to: 5220225    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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