Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      <---------ICU4                 <-------TEIL                                      <---------YAB1             ------>MYB46(1)                                       --------->ICU4             ------>MYB83                                        --------->YAB1           --------->DEAR3(1)                                    <--------HAHB4           --------->AtMYB61                                     <---------ICU4                <-----          --------->MYB46(3)                         --------->AHL20(2)                     <--------     --------->ANAC46   <---------ICU4               <---------AHL20(1)                   <--------HAHB4    ------>ZmHOX2a(1) <---------ARR11(3)             <---------AHL20(2)                   <---------ICU4    <xxxxxxxxxxxxxxxxxsmallRNA(si3)                  --------->AHL20(1)       --------->ARR11(3) -GAMYB<------NtERF2 --------->YAB1                 --------->AHL20(2)   ------->TEIL     --------->YAB1 --ANAC46 <------NtERF2<---------YAB1  --------->At4g35610      <---------ATHB12------>ZmHOX2a(2) --ANAC58 --------->DEAR3(2)           <---------At4g35610      --------->ICU4<---------ARR11(3) --ANAC58------>NtERF2--------->ARR11(3)            <---------AHL20(2)<---------YAB1     <---------YAB1   gttctcctcggcaccaacgtccatgatcatggcctccttgtagctgcaaaacaaataaattgttccatcattatgaatatgatctcgttgtatcattact  5181000                                                       <---------At4g35610                             ------>ZmHOX2a(1)         <---------ZAT2                    <-----------GT1                <---------REM1(1)        <-----------HVH21 ----YAB1       <---------YAB1                     --------->ALFIN1      --------->ZAT14 ---------->DOF2 -YAB1  <-----------HVH21  ----------->RAV1(2)  <---------TOE1(2)   <----------DOF2----------->GT1 --   attacaaacatgtcatttgttattacctctcctgagtctcgacgatgtcgaaggtgtagctggttcccttctttctacagtcacagagtaacaaagcata  5181100                 ----------->RAV1(1)          ------>ZmHOX2a(2)         <------ZmHOX2a(2)         --------->CCA1(2)                                                  ----------------->AGL3        <---------AGP1                                                     --------->CCA1(2)        --------->AGP1                                                    --------->AGP1        <---------ARR14(2)                                                --------->ARR14(2)        <---------ARR11(3)                                                <---------ARR11(3)        --------->ARR14(3)                                                <---------ARR14(2)        <---------ARR14(3)                                                --------->ARR11(3)        --------->ARR11(3)              --------->ICU4             --------->YAB1        --------->ARR14(2)    <---------HSFB2a(2)                --------->ANAC58    --------->YAB1            --------->HSFB2a(2)                --------->ANAC58   <---------ATHB12       --------->CCA1(2)                   <------ZmHOX2a(2)                     - --------->WOX13(1)      <---------ARR11(3)                  --------->AGP1<------ZmHOX2a(2)        < ------->WRKY18(1)       --------->ARR11(3)<---------YAB1    --------->ARR11(3)               <------   ggtcaatcaagatctagagcaacataagatttacagaagacaaagattatagtttcagacacagatcaagcatcaagatccaaaaacagagaggtttcac  5181200                                                                                                   --                                                                                                   <-                                                                                                   <-    <---------MYB52(1)                                                                       <-------   <-------GAMYB                                                                --------->ANAC58 ----  <---------MYB46(3)                                                            --------->ANAC58 <---  <-----------RAV1(1)                                                  --------->ZAT18    <---------ANAC58 -------->At4g35610                          <---------ARR11(3)        <---------ZAT18    <---------ANAC58 ---------At4g35610                --------->YAB1         ---------->DOF2       --------->ANAC46 <--- -----GT1                   --------->MYB52(1)  <----------DOF2       <------ZmHOX2a(1)  <xxxxxxxxxxx   tctgctgttggctcaacaaaatcgataactcaacgaatcagaaacagggtctttctcaaaaaaagaaacagaggacacttacacgcactgggtcttgtca  5181300                     <---------ANAC58        --------->ZAT2 ----------->HVH21        --------->HSFC1(2)        <---------HSFB2a(1)        --------->HSFB2a(1)        <---------ZAT2<---------WOX13(1)        <---------HSFC1(2)        <---------At4g35610        --------->At4g35610       <---------TOE1(2)    <---------YAB1  <-----------HVH21  <---------AtLEC2 ------->ZAT14       <---------ANAC46 --------ZAT18    <---------MYB52(1) --------ZAT14<---------At4g35610                       <------ZmHOX2a(1) ----HVH21    --------->LBD16--------->ATHB12         <---------TOE2(3)                   <-------GAMYB ----->At4g35610 <-------GAMYB <---------WOX13(1)   ---------->DOF2                      <---------MYB46(3) ------ZAT2 <---------LBD16 --------->ICU4       <----------DOF2                         --------->MYB52(2) ------At4g35610 <---------At4g35610         --------->DAG2                      --------->ARR11(3) xxxxxxsmallRNA(si3) <---------ANAC58      ---------->DOF2               --------->ALFIN1<-----------RAV1(1)   gcacagtcgcagcttccgcagttgcttgacatgattgagtttttgaaaaggctttaaaggatgtttagttatgaagtgtttgagttcttgtttgttgttg  5181400                                                                                           <---------                                                                                        <---------ARR14(2)                                                                                        --------->ARR14(2)                                                                                        <-----------ARR10                                                                                        --------->GLK1(2)                                                                                        <---------ARR11(1)                                                                                        ------->TEIL                                                                                       <---------ARR14(1)                                       <---------HSFB2a(2)    <---------ARR14(2)       <---------CCA1(2)                                    <---------AHL20(2)        <-----------ARR10        <---------GLK1(2)                                   <-----------TBP       ----------->GT1             ------->GAMYB                       <---------MYB52(1)    <------ZmHOX2a(1)--------->GLK1(2)  --------->MYB46(3)                    ------>ZmHOX2a(2)  --------->HSFB2a(2)   <---------GLK1(2)----------->HVH21                    ================================HOX2a_HOX2a             <---------ANAC55(2)       *TSS<---------MYB52(1)   <---------AHL20(2)      --------->ALFIN1    --------->ANAC55(2)   ttgttgttgttctgttttgtgatccgatggctatgtaatttatagaaggatagagagagtggagaatctctgcaaattatgtgacaaccgaatctttttt  5181500                                  --------->O2                                  <---------ANAC58                                  <---------ANAC58                                  <---------O2                                  --------->TGA1a                             --------->MYB46(3)                            ================MYC_MYB                            ------>MYB46(1)                            -------->P                     <-------GAMYB============================bZIP_DOF                     =======================MYC_MYB                    <---------ANAC58                                             <----------DOF2                    --------->MYB52(2)                                           <---------DAG2                    <---------ANAC58               <---------DAG2               --------------->AGL15                 <----------DOF2  <---------TGA1a  <----------DOF2              <---------------AGL15                 ===========================bZIP_DOF                            =====================           ---------->DOF2  ------>MYB83     <-----------GT1             <---------YAB1 -DOF2     =================================bZIP_DOF   <-----------GT1<---------MYB52(1)   gggttatggagagaaaagcctttcgttgccaacctctcgtgtccatttcactccttttttcccactatattcgttattcttccctttttttgtagtaatc  5181600                                                       --------->YAB1                    <-----------------AGL1          --------->GLK1(1)                    <-----------------AG         ------->GAMYB--------->CCA1(2)                    =================================================================================                   <-----------GT1           --------->MYB46(3)        <-----------GT1         <-----              --------->AHL20(2)           <-----------GT1   --------->AHL20(1)              --------        <----------DOF2                  <---------WOX13(1) --------->AHL20(2)              <-------- =====================================MADS_MADS--------->At4g35610 ------->TEIL          --------->ICU4   cattacaactctttttttatataacaaatttggaatatagttgattaacaactgaaatcaaaatatatgaattttagcatatgtagttggaattactatt  5181700                                                                                             <-------                                               --------->ATHB12                             <--------                                   --------->ALFIN1                          --------->HSFB2a(2)                                   <---------ATERF1(1)                    ------>NtERF2     <--------                                 <---------ANAC58                       <---------ANAC58    <--------     <---------AHL20(2)<---------AHL20(2)      --------->YAB1      <---------MYB46(3)       --------- ========MADS_MADS     --------->AHL20(2)     <---------ATHB12---------->DOF2<---------HSFB2a(2) ----YAB1          --------->AHL20(2)    ------>ZmHOX2a(1)   <---------AHL20(2)             <-------- ------->AGL15     --------->ICU4<---------ANAC46           --------->AHL20(2)             <--------- -YAB1 --------->GLK1(2)         <---------ANAC58    ----------->HVH21  <---------ANAC58  <---------TGA2(2)   agtataaataatctagttgaaatatttaaatagaggcgtgctcctcaaatcataggtgacaatttaaagtcgttgcctcccagacaaaattgtgacgtac  5181800                                        <---------YAB1                                      --------->YAB1                            <------ZmHOX2a(2)                           --------->ARR11(3)                           <-----------ARR10                           <---------ARR14(2)                                  --------->At5g28300                           --------->ARR14(2)                                --------->LBD16                           <---------ARR14(3)                               <---------ANAC46 --SPL7      <---------TOE1(3)       <---------YAB1                    --------->ATHB12 -ANAC58     <---------TOE2(3)<----------DOF2                         <---------ATHB12 -ANAC58 --------->CCA1(2) --------->ARR14(3)         --------->AHL20(2)   <---------LBD16 -ANAC46<---------ARR11(3) <---------ARR11(3)       --------->YAB1    <---------YAB1--------->YAB1 >ANAC55(2) ---------->DOF2<---------AGP1      <------ZmHOX2a(2)     <---------TOE1(2) -ANAC55(2)<---------AHL20(2)------>ZmHOX2a(2) ============================HOX2a_HOX2a    <----------DOF2 --------------TaNAC69(2)  --------->AGP1--------->YAB1             ------>ZmHOX2a(1)  <-----------GT1   tcgtgaacaagatttaaagttttgaacaagatctttgtttttataatagatcaattttaaatctatactcctatgattcggggtaattttaactttgcga  5181900  Previous    Next  AGI:  At3g15353.1    Description:  MT3 (METALLOTHIONEIN 3). similar to metallothionein type 3 [Brassica juncea] (GB:BAB85601.1); similar to metallothionein-like protein [Thellungiella halophila] (GB:AAM19713.1); contains InterPro domain Plant metallothionein, family 15; (InterPro:IPR000347); contains InterPro domain 4-disulphide core (InterPro:IPR015874) Range:  from: 5180674    to: 5181407    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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