Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                                                                   <-                                                                                             <-------                               <-------GAMYB                                                ---------                              --------->MYB55(2)                                            <------NtERF2                              ----------->GT1                                             <---------ANAC46                              <---------MYB46(3)                                         <<<<<<<<<E2Fc                            <---------MYB52(1)                              <-----------GT1------>NtERF2                       --------->ARR14(2)                               <---------ARR11(3)<---------ANAC58                       <---------ARR14(2)                               --------->ARR11(3)<---------ANAC58 ----------->GT1      ------>MYB46(1)      ------>ZmHOX2a(1)      <-----------GT1        <<<<<<<<<E2Fd <---------MYB46(3)   ------>MYB83--------->MYB52(2)              --------->MYB52(1)     ---------->ID1 --------MYB52(1)   <---------MYB59    ---------->ID1           <---------MYB52(2)   <----------DOF2- ----->ATHB12      ----------------->AGL1 --------->TOE2(3)    --------->ANAC46    <----------DOF2 <-   cattggttaaattcgatttagaccaaattcggtggttatttgttccttaagaatgtctagggtctaagtaacgagatattaccagctctttggcgcgttt  5085500          --------->SPL7         --------->MYB52(1)      <------NtERF2     ------>NtERF2     <-----------HVH21     <------------------SPL14    --------->RRTF1(3)    --------->RAP2.3(2)    --------->RAP2.3(3)    --------->DEAR3(1)    <---------ANAC46   --------->ERF1   --------->RAP2.3(1)   --------->DEAR4(2)   --------->ATERF1(1)   <------NtERF2   --------->RRTF1(1)  ------>NtERF2  <---------ATERF1(1)                               --------->ZAT18                            <----- <---------DEAR3(1)                                 --------->ZAT14               <------ZmHOX2a(2) ---------ZAT18                         <------NtERF2                            --------->ARR11(3) --------ANAC58                        ------>NtERF2<---------ZAT14              <---------ARR11(3) ---DOF2<---------SPL7               <---------ABI4(2)                    ===============HOX2a_HOX2a ----->OsCBT            <------ZmHOX2a(1)  <---------MYB52(1) ----------------->AGL1 --------->At4g35610 -------->ZAT18--------->At4g35610 <---------bZIP60(1)       <------NtERF2<------ZmHOX2a(1) --------- --------ANAC58<---------At4g35610 --------->bZIP60(1)  <-----------RAV1(1)     <------ZmHOX2a(1)   agcgcgccgtcgaacggagcggatgaggaagacagtgatggcaccggtaagaagcacactggtggccaattggagaggagtaggatcatcggaagtggcg  5085600                                                                               <---------DEAR3(1)                                                                            <---------O2                                                                            --------->O2                                                                            --------->TGA1a                                                                            ========================bZIP_DOF                                   <---------ANAC46                       ----------->RAV1(1)       <                            --------->ALFIN1                              <---------ALFIN1          -                          <---------ANAC46                              <-----------HVH21          <-                          <---------ANAC58                              ------>NtERF2             <--                          <---------ANAC58                              --------->LBD16           ---                          <---------bZIP60(2)                          --------->DEAR3(1)        <---                          --------->O2  <------ZmHOX2a(1)              --------->ANAC58         <----                          <---------O2<---------TOE2(2)                --------->ANAC58       -------                          --------->TGA1a  --------->At4g35610         --------->ANAC46       <------                          <---------TGA1a  <---------At4g35610      --------->DEAR3(1)        <------                         <-----------------------TaNAC69(2)         --------->AtMYB61        <------- ----ANAC46       --------->MYB52(1)<---------SPL7                  <---------ALFIN1         <------- >ALFIN1      --------->ANAC46 --------->SPL7                    <---------ALFIN1        <----------DOF2   aaaatggagttagtagacgaaaacggagacgtggacgacgtaggaagctcaattggaccatcttcttccacctccgccacatcggcgatttcttttacgg  5085700                           ------>ZmHOX2a(1)                           --------->LBD16   --------->GLK1(2)     ------>ZmHOX2a(2) ---------ARR14(2)      <------ZmHOX2a(2) -------->ARR14(2)     --------->ARR14(2) -----NtERF2           --------->ARR11(3) -------MYB46(3)       <---------GLK1(2) ------>LBD16          <---------ARR14(2) ------ANAC46       --------->ANAC58 -----LBD16         --------->ANAC58 -->ANAC46       ----------->HVH21 ---RAP2.3(2)   --------->LBD16                                        ----------->HVH21 ---RAP2.6(2)  <---------LBD16                                         <---------SPL7 --LBD16   --------->KAN4(2)     <---------TOE2(3)          --------->CCA1(2) --At5g28300  <---------LBD16  ---------->DOF2            --------->CCA1(2)                        <<   cggataatcggattataccgggacggatcctggtaaaggaagagagcgaatggattggagagataagacgcgttggacggagacggtaagggagagagaa  5085800                                                                                         ---------->DOF2                                                                                  ------>ZmHOX2a(1)                  --------->ZAT6                                              <---------ARR11(3)                ----------->RAV1(1)               *TSS                        --------->ARR11(3)          <---------ARR14(2)                      <-----------GT1             --------->ARR14(2)          --------->ARR14(2)                  <---------RVE1(1)               <---------ARR14(2)         <------NtERF2                       --------->ARR11(3)               <-----------GT1        <---------MYB46(3)                   <---------GLK1(2)               --------->RVE1(1)     <---------MYB46(3)                      <---------ARR11(3)              --------->GLK1(1)    <---------AtMYB61                 <------NtERF2              --------->ARR11(3)  --------->ZAT6 <<<<<<<<<<<<<<<LFY                 --------->DEAR3(1)      <---------YAB1   --------->CCA1(1)   gagacattggtggctctgcaacactaacattttcttagccgtcgaaagatttttatctcaccattaatgtcttcttcaaatatcctcactctaaagcctc  5085900                                                <---------ANAC58                                                <---------ANAC58                                               <---------HSFB2a(1)                                               --------->HSFC1(2)                                               <---------HSFC1(2)                                               --------->HSFB2a(1)                                    --------->LBD16                                    ------>NtERF2               --------->YAB1         <---------ALFIN1                                    --------->HSFB2a(2)        <---------YAB1    --------------->AtSPL8                                   --------->ANAC46         <---------YAB1       <---------------AtSPL8                                  <---------LBD16         <-----------GT1     ----------->GT1<-------   tctatcgtttagagggtctcttcttcgtagacactctccgcgaattagaggcttcccaagttaccattatactacagaaatagtaagtaccacattttat  5086000                                                                                             <-------                                                                                          <---------WOX13(1)                                                                                         >>>>>>>>>ARR2                                                                                         >>>>>>>>>ARR1                                                                                       --------->ICU4                                                                                       <---------YAB1                                                        --------->ARR14(2)           <---------ICU4                                             <---------ANAC58                        --------->YAB1                                             <---------ANAC55(2)                    <---------YAB1                                             <---------ANAC58                       --------->ICU4                                       --------->AHL20(2)                         <---------ICU4                                       --------->AHL20(1)                         --------->YAB1                  ---------->ID1       <---------AHL20(2)      --------->LBD16    <--------HAHB4         --------->ATHB12              <---------AHL20(1)      <-----------HVH21 <---------ATHB12   -      --------->ANAC55(2)        ----------->GT1      <------MYB46(1)            --------->ICU4    <-    <-----------GT1        <<<<<<<<<TBF1<---------ICU4<------MYB83               <---------YAB1 <---- --AHL20(2)<---------WOX13(1)    --------->AtLEC2    --------->MYB59  --------->AHL20(2)--------->ATHB12   atagtttcacttgattgtttatcgcattcttcttcatgtaaaatattacttgagttcggtttctccgtcgaataaaaaaactcatcattatgattgttat  5086100         <---------YAB1      <---------YAB1   <---------------AGL15   --------------->AGL15   ------>ZmHOX2a(1)  --------->ATHB12  --------->TOE2(3)  <---------YAB1                    ---------->DOF2                    --------->ANAC58 --YAB1--------->ATHB51 <---------WOX13(1)            --------->TOE1(2)                   --------->ANAC46 --------->ID1<------MYB83                           --------->MYB46(3)                   --------->ANAC58 ----------GT1<------MYB46(1)                 --------->DAG2        --------->ICU4      ---------->DOF2 -----YAB1    ----------->GT1  ------->TEIL  ---------->DOF2--------->GLK1(2)       --------->ANAC46   ttttccttattattgtaggtgaaatgatagatgaatgtttttgaacataaagggaaccaaagaatatgaaatgagtgtttgtttatacgtagaagcaatt  5086200                                                    <---------DEAR3(2)                                                    --------->HSFC1(2)                                                    --------->HSFB2a(1)                                                    <---------MYB46(3)                                                    <---------HSFB2a(1)                                                    <---------HSFC1(2)                       --------                    <---------bZIP60(1)            <---------DEAR3(1)          <----------DOF2                    --------->bZIP60(1)         ----------->HVH21            --------->At4g35610 ----                    <---------GLK1(1)       <---------ANAC58                 <---------At4g35610 <---                  --------->YAB1            <---------ANAC58            <---------At4g35610  <-------                <---------WOX13(1)     <---------ICU4               <----------DOF2          --------         ---------->DOF2          --------->HSFB2a(2)               <---------DAG2      <----------DOF2   tgtttgctaatgaaagtgaatgatatcagcattcttgtcgaacattacttgcgacggttcgagcccaaaactttatctgagctttcatgtcttttctcga  5086300                                                                             ------>MYB83                                 --------->DEAR3(1)                       --------->HSFC1(2)                                 --------->AtMYB61                        --------->HSFB2a(1)                       <---------At4g35610                                <---------HSFB2a(1)                       --------->At4g35610                                <---------HSFC1(2)                       ----------->RAV1(2)                              <---------PCF2                   --------->ARR14(2)                              <---------AtLEC2        <-----------------AGL1   <---------ALFIN1                  <---------ANAC58        ----------------->AGL1  --------->MYB46(3)             <---------MYB46(3)        --------->ANAC58   --------->PCF2 --------->ETT(2)    <---------AtMYB61        --------->ANAC58  <-----------HVH21      --------->ARR14(2)<---------ANAC58 ------>ZmHOX2a(1) <---------ARR14(2)     <---------ETT(2)    --------->ALFIN1 ->HSFB2a(2)      <---------ARR14(2)    --------->ZAT14       <---------DEAR3(1) ----->ARR14(2)   <---------GLK1(2)  --------->At4g35610    <---------MYB46(3)     <----------------- ------ARR14(2)   --------->ARR14(2)--------->DEAR3(1)     <---------AtMYB61 ------>MYB46(1) --HSFB2a(2)    --------->LBD16 <---------MYB55(2)         --------->ALFIN1<---------MYB59    ------- ->HSFC1(1)   <---------LBD16 <---------ALFIN1  <---------MYB52(1)<-------TEIL  ------>ZmHOX2a(1)   atcctttggaacccaaaccggaatcggctgtcccaccaccgctgtagaccggtttttcccagtggtggtgcatgggaccttcctctgtttttcttcgtct  5086400  Previous    Next  AGI:  At3g15110.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO39343.1) Range:  from: 5084285    to: 5085850    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g15111.1    Description:  unknown protein Range:  from: 5085867    to: 5085983    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g15115.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G53180.1) Range:  from: 5085999    to: 5087496    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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