Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                          <---------ARR11(1)                        <                                                          --------->GLK1(2)               <---------At4g35610                                                          <---------ARR14(2)         <---------ANAC46                                                          --------->ARR14(2)         --------->ALFIN1                                                         <---------ARR14(1)     --------->MYB52(1)  -          --------->YAB1                           --------->ETT(2)       >>>>>>>>>MYB1 <---------ZAT14         <---------ATHB12  <-----------GT1  <----------DOF2              --------->MYB52(1)         < <---------ANAC58         ---------->ID1    <---------DAG2------->TEIL  ------>ZmHOX2a(1) --------->At4g35610 <---------ANAC58        <-----------GT1    ------>ZmHOX2a(1)          <---------MYB59  --------->ZAT18 -------DOF2       <---------MYB52(1)    ---------->ID1  <---------CCA1(2)>>>>>>>>>MYB2--------->ALFIN1   ttttcttgccaatgaccattcgttttttttccccttacattttgtcctttttgtcgagcgaatcttcaatgttcctaactgaaaacggagtgggctgaag  5055700                                                                                -------->HAHB4                                                                                --------->YAB1                                                                               <---------YAB1                                                                             <---------ICU4          --------->MYB46(3)                                                 --------->YAB1        --------->MYB52(1)                                         --------->AtLEC2       --------->MYB46(3)                          --------->ARR14(2)     --------->YAB1  --------->TOE2(3)                                <---------ARR14(2)    <---------AHL20(2) -------->GLK1(2)                <---------At4g35610               ----------->GT1 -----------ARR10         ------->TEIL    --------->DAG2   --------->ANAC58 <---------YAB1 -------->ARR11(3)     ----------->GT1   ---------->DOF2   --------->ANAC58 --------->ICU4 ---------ARR11(3) <------NtERF2 --------->At4g35610<---------GLK1(1)--------->AHL20(2)           <--   aaaatctcaacaacggctggaggcgatgtaacttgagctatcgaaaaggaatggaactgcgacgaaaccatgtaaataataataatagtgtattgttgtt  5055800                                                   --------->YAB1                                                   <---------ICU4                                  --                           --------->HSFB2a(2)  --------->YAB1                                -------                           <---------HSFB2a(2) <-------TEIL                                   <------                 <---------ALFIN1           <---------KAN4(1)                           <------MYB83               <---------ALFIN1             --------->KAN4(1)                           ----------->GT1               --------->ANAC58            <---------KAN4(2)                            <------MYB46(1) --------DOF2  --------->ANAC58       ---------->DOF2   <---------ANAC55(2)            --------->MYB59   ctttggtatattttcacacacactctcttctgtaacttacaaaagaatattcataatcacgtttgaatagctcttagacacaaatgagttgggttataaa  5055900                                                                      --------->AHL20(2)                                                                      <---------AHL20(2)                                                                     --------->AHL20(2)                                                                    <---------------AGL15                   <-----------GT1                               <---------AHL20(1)                ----------->GT1                             <---------AHL20(2)       <---------TOE2(3)                                    --------->AHL20(1)      <<<<<<<<<<<<<<<<<LFY                                  <---------AHL20(1)             ----------      <-----------GT1                                      --------->AHL20(2)  ---------->DOF2 ------ --------->GT1<---------ANAC46                             --------->YAB1--------->ICU4 --------->ZAT6 -->AHL20(2)  <---------ANAC58                   <---------ATHB12--------->AHL20(2)     --------->ANAC46 ---AHL20(2)  <---------ANAC58  --------->MYB52(1)---------->DOF2<---------AHL20(2)   <-----------GT1   ttagtaattaacaatggcatgttacaaattagactaacaacattgtagcaaatcaagccgattatattttatttaattagtaaaagattaacacaacaaa  5056000                               <---------WRKY18(1)                              ----------->HVH21                         --------->PCF2                         <---------TCP20                         <---------TCP15(1)                        <---------PCF2                        --------->ZAT18                        --------->TCP15(1)                  --------->ALFIN1  <---------MYB52(2)                <---------ANAC46  --------->ZAT6                     <-----------GT1    ----------->GT1     --------->PCF5                         <---------MYB52(1)   --------->TOE1(3)   <---------ATERF1(1)                  ---------->ID1                          <   --------->TOE2(3)   --------->ATERF1(1)               <----------DOF2                   <---------ANAC58 ->RAV1(1)     <-----------------------TaNAC69(2)     --------->ARR11(3)                   <---------ANAC58 ---->DOF2 ----------->GT1 <------NtERF2              <---------ARR11(3)   *TSS     <---------GLK1(1)   agaaacctgaaaatagttaagtggagggccccatgaccactaacaaaaacatataagctcttttcgttttgttactctctccattgaattctgtcttgat  5056100                                                                 <---------ARR14(2)                                                                 --------->ARR14(2)                                                           <---------MYB46(3)                                                          <---------WOX13(1)                                                        <------------ATHB5                                                        --------->ATHB12                                                        -------->ATHB1                                                        <--------ATHB1                                                        --------->YAB1                                                        <---------ICU4                                                       <---------ATHB12                          ----                                                       <---------ATHB51                          <---                                                       --------->ICU4                            ----                                     ------->GAMYB     <---------YAB1           --------->ZAT14 -----                                  --------->MYB52(1)------------>ATHB5          ---------->DOF2<-----     <---------GLK1(2)      <----------DOF2        <------ZmHOX2a(2) --------->At4g35610<-----------ARR10 ----------DOF2         <---------CCA1(2)          <---------ATHB12------>ZmHOX2a(2)    <---------ARR11(3)   cactttcgattctctcaaaaaatcccataactttcccaacgaaaaatgttccgatcaatgattgttcgatctgcttccccagtgaagcagggtcttctcc  5056200                                                              --------->ARR14(2)                                                             <---------PCF2                                                          --------->ALFIN1                                                         <---------MYB52(1)                                                        <---------DEAR3(2)                                                       <---------ATERF1(2)                                                       <---------DEAR3(1)                                                       --------->ATERF1(2)                                                      <------NtERF2                                                     ------>NtERF2                                                    --------->DEAR3(1)                                                    --------->RAP2.3(2)                                                    --------->ATERF1(2)                                                    <---------ATERF1(2)                                                   --------->ATERF1(1)                                                   --------->RAP2.3(1)                                                   --------->DEAR3(2)                                                   <---------RAP2.6(2)                                                   --------->ORA47(2)                                                   --------->RAP2.6(1)                                                   --------->DEAR4(2)                                                   --------->ERF1     --------->ARR14(1)      =======================HOX2a_HOX2a    <---------ARR14(2)       ------>ZmHOX2a(2)     <------NtERF2    --------->ARR11(1)      <------ZmHOX2a(2)     ------>NtERF2    <---------GLK1(2)    --------->LBD16          --------->ABI4(2)    --------->ARR14(2)  <---------HSFB2a(2)       <---------ATERF1(1)      <---------DAG2   =================================HOX2a_HOX2a  --------->ALFIN1          ==========================   ================================HOX2a_HOX2a<---------DEAR3(1)     --------->ANAC58   <------ZmHOX2a(1)    --------->HSFB2a(2)  ------>ZmHOX2a(1)<---------ARR14(2) ----->LBD16    <---------ARR14(2)           ==========================HOX2a_HOX2a                --- ------At4g35610--------->ARR14(2)    <-----------TGA1--------->ATERF1(1)  <----------DOF2        === ----->At4g35610--------->GLK1(2)   <-----------STF1--------->RAP2.3(3) <---------ALFIN1       <----- ---->ANAC46    ------->TEIL========================HOX2a_HOX2a ------>ZmHOX2a(2)           --------- ----LBD16 --------->At4g35610  ---------->DOF2  <---------DEAR3(1)  --------->ANAC58     ------->TEIL   gcagaggattcgcctctgaatctgttcccgatcgcaaagtcgtcatcctcggtgccgccggtgggatcggccagccactttctcttctcatgaagcttaa  5056300                                                         <---------TGA1a                                                         --------->TGA1a                                                         --------->O2                                                         <---------O2                                                         <---------ANAC46                                                         <---------bZIP60(2)                                                         --------->bZIP60(1)                                                         ========================MYC_MYB                                                       <---------TGA2(2)                                                      ----------->TGA1                                                    --------->ZAT2                                                    --------->At4g35610                                                    <---------ZAT2                                                 <---------At4g35610                                              <-------GAMYB                                              =====================MYC_MYB                                             <---------DEAR3(1)                    <---------TOE1(2)                                           ------>NtERF2 --------->TGA2(1)        <-----------RAV1(2)     <---------CCA1(2)                     --------->LBD16    <-----------HVH21 ------>ZmHOX2a(2)   --------->TGA1a                  --------->ZAT6<---------RAP2.6(2)         <---------ARR14(2)   --------->O2                     <---------ALFIN1<---------At4g35610  ------->GAMYB ============bZIP_DOF             ------>NtERF2<<<<<<<<<MYB2 <---------DEAR3(2)<------ZmHOX2a(2) ---->GAMYB                       ----------->RAV1(1) ----------->HVH21 --------->MYB46(3) ============MYC_MYB      --------->ARR11(3)<------NtERF2<---------TGA2(1)--------->ANAC46    ------>ZmHOX2a(2) ------GT1               --------->YAB1   --------->LBD16<---------bZIP60(1)  --------->ARR14(2)    - >TOE1(3)               <---------YAB1   <---------LBD16----------->STF1<---------ALFIN1     <------ZmHOX2a(2)   ccctctcgtctcttctctctccctctatgatatcgccaacactcccggcgttgctgctgacgtcggtcacatcaacacccgatctcaggtacccgatcgc  5056400                                ------>ZmHOX2a(2)                              --------->ARR11(3)                        <-------TEIL                       --------->ARR14(1)                      --------->ARR11(1)                      <---------GLK1(2)                                        ---------->ID1                      --------->ARR14(2)                                   <---------ANAC58                      <---------ARR14(2)<---------ARR14(2)                 <---------ANAC58                    ----------->ARR10   --------->ARR14(2)        ----------->GT1                  -- -------------------->WRI1    <---------ARR11(3)               --------->GLK1(2) <----------DOF2   <-   ttccatgttttcatcttcggtctagattcgatgatcgtccacgatttgctaattgtattggcgataatctgtaaaatccttgtcttttatgtgcgattgt  5056500                                                                    <-----------TGA1                                                              ------>NtERF2                                                             ----------->HVH21                                                             --------->WRKY12                                                             --------->DEAR3(1)                                                             --------->WRKY38(1)                                                            --------->ATERF1(1) <---------At4g35610                                                            <------NtERF2       --------->ZAT2                                            ---------->DOF2 <----------CDC5     <---------ZAT2                                        <---------LBD16    --------->At4g35610  ----------->RAV1(2)                                   --------->ATHB12        <---------At4g35610  --------->At4g35610                                  --------->ICU4          <---------DEAR3(1)  <-----------RAV1(2)                                --------->YAB1     --------->HSFB2a(2)   <---------ICU4                               <---------YAB1      <---------HSFB2a(2)  <---------YAB1      --------- ------->ICU4        <-------TEIL <---------YAB1   <---------HSFC1(1)   --------->ICU4      --------- --------YAB1  <---------LBD16 --------->ICU4   --------->ARR11(3) --------->bZIP60(2)      ---------   catgtttcaaacaggtttctgggtacatgggtgatgatgatttggggaaagctctagaaggcgctgacctcgtcattattccagctggtgtcccaaggaa  5056600  Previous    Next  AGI:  At3g15020.1    Description:  malate dehydrogenase (NAD), mitochondrial, putative. Identical to Malate dehydrogenase 2, mitochondrial precursor [Arabidopsis Thaliana] (GB:Q9LKA3); similar to malate dehydrogenase (NAD), mitochondrial [Arabidopsis thaliana] (TAIR:AT1G53240.1); similar to Malate dehydrogenase, mitochondrial precursor (GB:Q43744); contains InterPro domain Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal; (InterPro:IPR015955); contains InterPro domain Lactate/malate dehydrogenase; (InterPro:IPR001236); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain Malate dehydrogenase, NAD-dependent, eukaryotes and gamm Range:  from: 5056075    to: 5058255    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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