Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            --------->GLK1(2)                     ------>NtERF2                     <------NtERF2 ----------->GT1                                       --------->ARR11(3)                     --------->LBD16                                                     <---------ARR11(3)                    --------->RAP2.6(2)                                    <---------AHL20(2)                    --------->DEAR3(1)             <-----------GT1         --------->AHL20(2)                    --------->RAP2.3(2)           <---------AHL20(2)      --------->AHL20(2)   ------ --ICU4             --------->ANAC46--------->At5g28300                   <---------AHL20(2)   <----- ->YAB1             --------->RRTF1(2)   <---------ATHB12    <---------MYB59      ---------->DOF2---- -YAB1             <---------LBD16 <---------ZAT6--------->AHL20(2)  ------>ZmHOX2a(1)   <---------AHL20(1) >ICU4             --------->RAP2.3(1) --------->WOX13(1)    <------------MYB.PH3(2)     --------->AHL20(1)   gtttttttaaaacaaaaattcgccgcaaattctattactgtaaatcaagaattttatcatctatctaactcctaaatttttttaaaaagaatattttcta  4892300                                                                <---------AHL20(1)                                                                --------->AHL20(2)                                                             --------->YAB1                      --------->ANAC55(2)                   <---------AHL20(2)                      <---------ANAC55(2)                  --------->AHL20(2)                     <-------TEIL                 --------->AHL20(2)                <---------AHL20(2)                <---------AHL20(2)             <-----------GT1  --- --->HSFB2a(2)  --------->AHL20(2)             --------->AHL20(2)    <-----------GT1             ---- ----HSFB2a(2) --------->YAB1   <---------YAB1--------->AHL20(2)--------->AHL20(1)              ----- ------>DOF2  <---------YAB1 <---------YAB1   <---------AHL20(2)<---------AHL20(2)          ---------   aaagttttctctagttattaaaatacatattgttattgttactgagaaataaataaatccatataataaattaacctatagttttccctctcaaaaaaga  4892400                            --------------->AGL15                         <----------ID1                         --------->ANAC58                         --------->ANAC58                       ---------->DOF2                 <---------ICU4                    --------->MYB52(1)                  ----------->GT1              --------->MYB46(3)                      <---------MYB52(2)            ---------->DOF2 <---------------AGL15   --------->YAB1               --------->AtLEC2  --      --------->AHL20(2)--------->DAG2 --------->GLK1(1)                     ------>NtERF2         -- ------>MYB46(3)  --------->ANAC58     <---------GLK1(1)                     --------->LBD16       -- ----->RAP2.6(3)  --------->ANAC58   <------ZmHOX2a(1)<---------YAB1        --------->ANAC46--------- ---->MYB52(1)  ---------->DOF2 --------->DAG2--------->ANAC58             <---------LBD16-------->P- ->DOF2    --------->AHL20(2)  ---------->DOF2--------->ANAC58        --------->AHL20(2) <-----------GT1   acggccaactaaataaaagaaagcaaaaagccaaaaagaggaaatcgcacccattcatcattctctcttcaaaaaattccgccatggaaactaacctcac  4892500                                                                                       ------>MYB83                                                                                       ------>MYB46(1)                                                                                     <---------MYB59                                                                                  ------>NtERF2                                                                                 --------->DEAR3(1)                                                                              --------->At1g77200             --------->AHL20(2)                            <---------ANAC58   --------->DREB2C(2)             ----------->TBP                               <---------ANAC58   ------->GAMYB           <----------DOF2                                <---------HSFB2a(1) --------->DEAR3(1) ------->ANAC46                        ------>ZmHOX2a(1)  <---------HSFC1(2) --------->DEAR3(2)     - ------->ANAC58                    <---------ALFIN1       --------->HSFB2a(1)--------->MYB46(3)     - ------->ANAC58         ------>ZmHOX2a(1)                 --------->HSFC1(2)------>NtERF2           - >TOE2(3)------>ZmHOX2a(1)         --------->ANAC46    <---------At4g35610 <---------ALFIN1     <<<<< ----------->CBF  <-----------GT1<---------ALFIN1  ------>ZmHOX2a(1)    --------->ANAC46     --------   taagcaatttcctctttatataactccttccttctccactcctctcttccctccttccgatgcttccctccaaaaccccaccgacgacctaatccctaga  4892600                                                                     --------->WRKY12                                                                     --------->WRKY38(1)                                                                    <---------MYB52(1)       <---------At4g35610                                         <-------GAMYB -------->ANAC46            <---------WOX13(1)                   <------NtERF2 -------->ANAC58           <------------CBF           --------->ANAC46                 ------>ZmHOX2a(1) -------->ANAC58         <---------YAB1               --------->ANAC55(2)       <---------TOE2(3) <<ZML2--------->At4g35610--------->ATHB12            --------->ANAC58   ------>ZmHOX2a(2) ->HSFB2a(2)         <---------GLK1(2)                --------->ANAC58   =====================HOX2a_HOX2a   acacgaatcagcttaattcgtctgattctgattgattttctcccaaaacatgtctcacgaaatcgtccccgttgatcccattgatgttcctagcacgagt  4892700                                        <-------MYC2                                        ------->MYC3                                        --------->TOE1(2)                                        <-------MYC3                                        <-------PIF5                                        ------->PIF5                                        ------->MYC4                                        ------->MYC2                                      --------->ATERF1(1)                                       <---------ANAC58                                   <------NtERF2                                       --------->HSFB2a(1)                               <---------DEAR3(2)                                       <---------ANAC58                                  <---------ATERF1(1)                                       <---------HSFB2a(1)               <---------HSFB2a(2)                                     <---------ARR14(2)                  --------->HSFB2a(2)------>NtERF2                                    <------NtERF2                       <---------LBD16<------NtERF2                                   --------->LBD16                      <---------ANAC46<---------DEAR3(1)                                 <---------LBD16             ------>ZmHOX2a(2)       <---------ANAC58                              <-------TEIL                  <------ZmHOX2a(2)        <---------ANAC58                             --------->ARR14(1)            <---------ARR11(3)        <---------O2 <--                             --------->CCA1(2)             --------->ARR11(3)        <---------ANAC46                            <---------ARR14(2)             <---------ARR14(2)        <---------bZIP60(1)                --------->ARR14(2)--------->ANAC46         --------->ARR14(2)        --------->bZIP60(1)            <---------LBD16 <---------GLK1(2)             --------->GLK1(1)      <-------MYC3  <-----          --------->GLK1(2) --------->ARR11(1)            <---------GLK1(1)      ------->MYC3 <------   --------->ANAC58         --------->ARR14(2)      --------->ZAT18 <---------DAG2<-----------RAV1(1)   --------->ANAC58       ----------->ARR10         <---------ZAT14 <----------DOF2<-----------HVH21 --------->MYB52(1) ------>ZmHOX2a(1)--------->ARR14(2)--------->ANAC46<---------LBD16<-----------HVH21   tactcacggccaattctgggtcctcgtgaagattcgccggaacgtgctaccgagttcacgagatccctaacttttcgggaacatgtgtcgtcggagcctt  4892800                          --------->At4g35610          --------->HSFB2a(1)                                                 --------->ARR14(2)          <---------HSFB2a(1)        <-------TEIL                            <------ZmHOX2a(1) -------YAB1       ----------->RAV1(1)                           <---------ANAC58         <---------ANAC58 -----DOF2--------->HSFC1(2)        --------->GLK1(2)            <---------ANAC58         <---------ANAC58 ---DAG2  <---------HSFC1(2)    --------->LBD16                  <-------GAMYB<---------ARR14(2)   ttgatagcgagaggcttccagcgacattagcttccgagattcagaggtttcttcgtattgctaacttggttgagtctgaggaacctcgaattgcttatct  4892900                                 <------MYB46(1)                      <---------------AGL15                      --------------->AGL15                                              <---------YAB1                ------>ZmHOX2a(1)<------MYB83                              --------------->AGL15     <---------ZAT14 ======================================================================MADS_MADS     --------->ZAT14 ----------------->AG                                 <---------ANAC58     <-----     --------->ZAT18 ----------------->AGL1                               <---------ANAC58     <-----     <---------ZAT18 ----------------->AGL3                            <----------DOF2 --------->YAB1   atgtgagttcactctctcctcttccctaattttgtaggtcaatatttcactgagtttttcttcgaaattcaagctttcttgttgaagaatcatacttgag  4893000                                                                                       --------->ANAC46                                                                                       --------->ANAC58                                                         <-------MYC3                  --------->ANAC58                     --------->ZAT2                      ------->MYC3                 --------->SPL7                     --------->ZAT14                ----------->RAV1(1)             <---------SPL7                     --------->At4g35610           --------->ANAC46                --------->ALFIN1                     <---------At4g35610          --------->ZAT18                 <------------------                  <---------At4g35610             <---------ZAT18          --------->LBD16  ---------                  --------->At4g35610     <---------HSFB2a(2)             <---------HSFB2a(2)               <-----------HVH21          --------->HSFB2a(2)    <---------GLK1(2)<---------------AtSPL3   <---------ATHB12  <---------ZAT2   <----------DOF2 <---------ALFIN1    --------->HSFB2a(2) ----ANAC58   <-----------RAV1(1)    <---------ANAC58 --------->AtMYB61  <---------LBD16    <-------- ----ANAC58--------->GLK1(2)         <---------ANAC58--------->ANAC46   --------->MYB52(1) <---------MYB46(3)   taccaatgttgaaattctgtcgctgcaggccgatttcatgctttcgagatagcccaccacatggatagaaactctaccggaagaggtgtacggcagttca  4893100                                                                                             --------                                                                                            <--------                                                                                            <--------                             --------->ANAC58                                         <---------ICU4 -----TaNAC69(2) <---------ANAC58                                                     --------->YAB1 >At4g35610      <---------ANAC58        --------->At4g35610                  <---------HSFB2a(2)<--- -At4g35610 ---------->DOF2  --------->ANAC58                                 --------->HSFB2a(2)<---   aaacttctcttcttcaaaggcttgaactggcaagtcatcaaacagatgagtagaaagtttttgaataagtcatgaaatttctaaaaaatcatcactttac  4893200  Previous    Next  AGI:  At3g14570.1    Description:  ATGSL04 (GLUCAN SYNTHASE-LIKE 4); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups. similar to ATGSL03 (GLUCAN SYNTHASE-LIKE 3), 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT2G31960.1); similar to CALS1 (CALLOSE SYNTHASE 1), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT1G05570.1); similar to CALS5 (CALLOSE SYNTHASE 5), 1,3-beta-glucan synthase [Arabidopsis thaliana] (TAIR:AT2G13680.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15267.1); similar to putative callose synthase 1 catalytic subunit [Oryza sativa (japonica cultivar-g Range:  from: 4892650    to: 4902635    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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