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AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                 <-----------HVH21
                        <---------WOX13(1)   --------->MYB52(1)
                       --------->ARR14(2) --------->ANAC55(1)
                       <---------GLK1(2)  --------->ANAC58                                --------->YAB1
                       <---------ARR14(2) --------->ANAC58                      --------->ANAC58
                  ------>MYB46(1)         --------->ANAC46                      --------->ANAC58
                  ------>MYB83     <---------MYB46(3)              ---------->ID1     <----------DOF2
--ANAC55(2)    ----------->RAV1(2) ----------->GT1         <------ZmHOX2a(1)    --------->ANAC46
 
aaacactgcgatttgataacctgccagattggcaagagtggttagacgtaagggtcacaagaggagacttgttcccttctctcaagaaacttttcatact  4860600
                           ------>MYB83
                          --------->MYB55(1)
                         <---------MYB46(2)
               --------->LBD16
              <---------LBD16 ===============================bZIP_DOF
             <---------LBD16  <----------DOF2                                               <------ZmHOX2a(2)
            =================================================MYC_MYB                        ========
            -------->P   <---------MYB59                                                   <--------
           --------->MYB52(1)<---------DAG2                                               --------->At4g35610
          ----------->HVH21------>MYB46(1)                                                <---------At4g35610
        <---------At4g35610==================================MYC_MYB                      --------->bZIP60(2)
        --------->At4g35610-------->P              --------->ANAC46             --------->GLK1(1) --
       <-----------ARR10 <---------MYB111(1)       --------->TGA1a              <---------GLK1(1) --
    --------->HSFB2a(2)  <---------MYB111(2)   ------>ZmHOX2a(2)  <-----------RAV1(1)--------->ANAC46
 
gagatgtccagagctaaccgggactctacctacctttcttccttctctgatctcacttcacatctataaatgtggcctcttagatttccagccagatcac  4860700
                        --------->ANAC58
                 --------->TOE2(3)
                 --------->TOE1(3)
                <---------HSFB2a(1)
                --------->HSFB2a(1)
                <---------HSFC1(2)        <---------At4g35610
                --------->HSFC1(2)        <---------ZAT2
 <---------ARR14(2)     --------->ANAC58  --------->ZAT2
====================HOX2a_HOX2a           --------->At4g35610          <-----------GT1       -------
-ARR11(3)    <------ZmHOX2a(1) --------->YAB1 ----------->HVH21    <----------DOF2           -------
------->ANAC58<---------ARR14(2)     --------->DAG2               --------->TOE2(3)     <---------ETT(2)
------->ANAC58--------->ARR14(2)    ---------->DOF2      <---------MYB52(1)         <---------ARR14(2)
 
cacgaatacagttacaggaaccttcaaacgctaagcataaaaagcagctgtgacactctcgttaagtttcctttaaaccatttcgccaatctcgacaagc  4860800
                                                                --------->ZAT18   --------->GLK1(2)
                                                         <---------------------WRI1    <---------ATHB12
                   --------------->AtSPL8               <---------SPL7      --------->TOE2(2)      -
           <---------ZAT14                            --------->ALFIN1      --------->TOE1(2)     --
           --------->ZAT18                          <---------ANAC58       ----------->RAV1(2)   <--
      <------ZmHOX2a(2)                             <---------ANAC46     --------->ARR14(2)      ---
-->ANAC58  <---------ZAT18       --------->At4g35610<---------ANAC58     <---------ARR14(2)      <--
-->ANAC58  --------->ZAT14       <---------At4g35610<---------AtLEC2    <------ZmHOX2a(1)   <-------
 
ttgaagtcgatcagtgcacatccttgtactctcttgagctctcaaatgagcatttgcgtggtccgaatgccctaaggaacctgagaatcaatgactgtca  4860900
             <---------HSFB2a(2)
             --------->HSFB2a(2)
      <---------GLK1(2)
     --------->At4g35610
     <---------At4g35610
     <---------ZAT2                                      --------->ARR14(2)
---------->RAV1(2)                                     --------->ANAC58
------->GLK1(2)                                        --------->ANAC58                       ------
-------GLK1(2)--------->LBD16                <-----------HVH21                           --------->ZAT2
------>ARR14(2)                             --------->ANAC46                             --------->At4g35610
-------ARR14(2)                --------->TOE2(3)    <------ZmHOX2a(2)                    <---------At4g35610
----HVH21    --------->ANAC46------>NtERF2  --------->bZIP60(2)                 --------->MYB52(1)
 
gaacctgcagcttcttccgaaactaaacgctctgcctcaaaacttacaggtcacgatcacgaactgcaggtatctcagacagccaatggaacagcagcct  4861000
                                        >>>>>>>GRF7
                                     <-----------HVH21
                                   ------->MYC3
                                   <-------MYC3
          ==========================HOX2a_HOX2a
          ------>ZmHOX2a(1)       --------->O2
         --------->TOE2(3)        --------->TGA1a
    <---------YAB1                <---------O2                                                   ---
  --------->YAB1                  <---------TGA1a                                     <-------TEIL--
 <---------YAB1 <-------TEIL <------ZmHOX2a(2)                              <---------YAB1       ---
--------->ARR11(3)          --------->ARR11(3)                         <------ZmHOX2a(2)         <--
<---------ARR11(3)          <---------ARR11(3)  --------->DEAR3(1)    <---------ARR11(3)         <--
--->TOE2(3)    *TSS<---------At4g35610 <-----------RAV1(2)            --------->ARR11(3)         ---
 
caatatcatcatcctcagtttcatcttccaagatcaaacgtgtcaggctcaccgaagtctcatggttcacacagatcatatgattcacgttcatcttcaa  4861100
                                          <----------DOF2
                                   <------------------------ANAC81
            <---------GLK1(2)     --------->ANAC55(2)
        ----------->RAV1(2)      <-------TEIL                                              ---------
------>ARR11(3)                <---------ARR14(2)                              <---------ANAC58
------->CCA1(2)             --------->AHL20(2)                              <---------MYB52(1)
------>ARR11(1)            <---------ATHB12   ---------->ID1   <----------DOF2 <---------ANAC58   <-
-------ARR14(2)          --------->WOX13(1)--------------->AtSPL8    <----------DOF2     -----------
-------ARR11(3)  <-----------HVH21<---------ANAC55(2)          <---------DAG2  <---------ANAC46   <-
------>ARR14(2)--------->MYB59 --------->ARR14(2)           ------->TEIL   <-------GAMYB <----------
 
gatatgactaaacctgattcggtcgcatcaatcaaatacgtttttctttgttccatttctatgtagctttttctttcccgttgtgtgatatatgtgtaca  4861200
                                          <-----------GT1
                                        --------->HSFB2a(1)
>ZAT18                         ----------->HVH21
---------DOF2              ------>ZmHOX2a(1)                         --------->KAN4(2)
---->AtSPL8               --------->TOE2(3)                   <----------DOF2       ----------->GT1
--------DAG2         <----------DOF2    <---------HSFB2a(1)  XXXXXXXXXXXXXXXXXXXX>MIR783  --------->RVE1(1)
-----AtSPL8         <---------ICU4     --------->ARR14(2)---------->DOF2    ----------------->AGL3
 
acttttctaagttttgtcagtaatcttttcctcagtaacagggattttccaactaaaatataaagctttgctcattctcatcaaatatagaaaatatcag  4861300
                                                   --------->TOE2(3)                     <---------LBD16
                                             --------->ALFIN1              <----------DOF2
                                             <---------REM1(1)          --------->ARR11(3)
                                           <---------ANAC58      --------->AtLEC2        <---------ANAC58
                          ------>ZmHOX2a(2)<---------ANAC46      --------->ANAC58        <---------ANAC58
                ---------->DOF2    ----------------->AGL1--------->YAB1 <---------ARR11(3)    <-----
     ----------->GT1 <---------WOX13(1)    <---------ANAC58      --------->ANAC58      <-----------GT1
 
ggtgcaatttgtaataaacaaaagattgatctaaaacggcccaaatgggtgtagccttattcatagccaagcaaacatctttttctcatttttcgggctc  4861400
              <---------------AGL15
      --------->ZAT18
      <---------ZAT18
   <------MYB83                 <---------ATHB12
   <------MYB46(1)             --------->ANAC58
  --------->MYB55(2)           --------->ANAC58
  <---------MYB46(3)          --------->WOX13(1)
  <---------AtMYB61     ---------->DOF2              --------->AHL20(2)       <---------CCA1(2)
<---------MYB52(1) --------->ICU4--------->YAB1  <---------YAB1   --------->TOE1(3)
----GLK1(1)   --------------->AGL15            --------->YAB1     --------->TOE2(3)         --------
 
tccgattggtggactctctctaattagtaaaggcaatcaacaaaaaacaattttgataaaatgccaaaaccttaaaaacccatatttttagtatgccgat  4861500
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AGI:  At3g14470.1   
Description:  disease resistance protein (NBS-LRR class), putative. Identical to Putative disease resistance RPP13-like protein 1 (RPPL1) [Arabidopsis Thaliana] (GB:Q9LRR4); similar to disease resistance protein (NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT3G14460.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49684.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24729.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN77617.1); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Leucine-rich repeat-containing protein (InterPro:IPR015766); contains InterPro
Range:  from: 4857947    to: 4861254    Orientation: Forward
Links:  TAIR  MIPS 
 
AGI:  At3g14475.1   
Description:  snoRNA. snoRNA
Range:  from: 4860896    to: 4861016    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
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