Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            <---------GLK1(2)                                       --------->YAB1                                    ------>MYB46(1)                                         <--------                           ----------->RAV1(2)                                           <--------P                 <---------AHL20(2) ------>MYB83                                        <---------MYB52(1)                --------->AHL20(2)<---------MYB46(2)                                ------>ZmHOX2a(1)             --------->AHL20(2)   <---------MYB59             <-----------GT1  --------->KAN4(2)            <---------AHL20(2)  ------->TEIL               <---------AHL20(2) --------->HSFB2a(1)   <----------DOF2<-----------GT1 <---------MYB111(1)    <---------AHL20(2)   <---------KAN4(1)   gtcgtcttttgcatattatttaatcttccatctgtacctaatcagaattttcagactatatttttttcaagtcaaattgaacattcctctggtagtttta  4857500              <---------YAB1            <---------ICU4           <---------YAB1           --------->ICU4                      --------->ARR11(3)                        --------->YAB1         -------->HAHB4                       --------->GLK1(1)                          <--------HAHB4         --------->YAB1                       <---------GLK1(1)                          <---------ICU4         <---------ICU4                      <---------ARR11(3)                         <---------ATHB12        <---------ATHB12                     --------->ARR11(3)                 --------->HSFC1(2)    --------->AHL20(2)               ------>ZmHOX2a(1)                      --------->ANAC58  --------->ANAC58                ---------->ID1                            --------->ANAC46  --------->ANAC58              <---------ANAC58                            --------->ANAC58  <------  --------->ANAC46              <---------ANAC58 --------->YAB1  --------->AtLEC2     --------->WOX13(1) -ZAT6  --------->ICU4 --------->YAB1<----------DOF2           <---------AtLEC2 <---------HSFC1(2)   atccaagtaaatgattatgactaattcataagtttcgtcctttacaagatatcatcaagttttctccatggaaaatgcaggcaacttccaatcattttcg  4857600                                                                <---------WRKY12              <---------MYB46(3)                 <---------ANAC58             <---------YAB1                <-------TEIL         <---------WRKY38(1)           <------MYB46(1)           <---------AtLEC2           <---------WRKY45                    <           <------MYB83              <---------ANAC46        --------->ANAC58                     ---          <---------MYB46(3)         <---------ANAC58        --------->ANAC58 <---------ARR11(3) <---        <-------GAMYB                <---------ANAC58        <<<<<<<<<<WRKY18 --------->ARR11(3) <---        <---------At4g35610         <------NtERF2<---------ANAC58         ---------->DOF2        ---- ---LBD16<---------MYB52(1)        ------>NtERF2 <---------ANAC46<---------DOF5.7(2)      <---------MYB52(1)   gagtagtttcagttggtgattgtggaatacatttcggtggcatggttcatggtgtgttttgtcaagtcaacgtagtaaaagaacttcattcccttaagta  4857700                          ------>MYB46(1)  ----------->ARR10       ------>MYB83  --------->MYB52(2)      --------->MYB52(1)                                <---------YAB1 --------P              --------->AtMYB61                             --------->ATHB12       <------- -------->GT1           <---------MYB59      <----------DOF2         --------->ICU4         <-------- ------TOE2(3)      <---------ETT(1)        <---------ANAC58         <---------HSFB2a(1)    <-------- ------TOE1(3) <---------DAG2               <---------ANAC58  <------------CBF          <------------CBF ----->MYB59   <----------DOF2     <-----------GT1           --------->ATHB12         <---------ZAT14   aggttagtttctctgaacttttccgaccaaactgttttgaccacttgctttgtaatttcttagttattggaatgtttgattatacgagtgtattgctttg  4857800                                <---------YAB1                              <------ZmHOX2a(1)                            <---------TOE2(3)                      --------->ATHB12                         ----------->HVH21                      <---------AHL20(2)                     <---------ANAC46                      --------->AHL20(2)                   <---------At4g35610                      --------->ATHB51--------->ZAT6       <---------ZAT14                     <---------AHL20(1)                    --------->ZAT2 <------------CBF    --------->AHL20(2)                    --------->At4g35610                  <---- ---DOF2             <---------AHL20(2)   --------->ZAT14  <---------ZAT2                       <---- -ANAC58        <------ZmHOX2a(2)--------->YAB1         <---------ANAC58                        <---- -ANAC58        =====================HOX2a_HOX2a        <---------ANAC58             <----------DOF2   gcgaattgagccctgtggatcaaattatttgaggatgataacactgaagaaatagatagcctgctgtgaagttgttcttgattttgtctttgtctcttgc  4857900                       <---------ANAC46                                    <---------DAG2           <---------HSFC1(1)                                              <----------DOF2           --------->HSFB2a(2)                                     <---------ANAC58           --------->HSFC1(1)                                      <---------ANAC58           -------           <---------HSFB2a(2)               <---------WRKY18(1)   <---------ANAC46   <---------ARR11(3)          <---------LBD16--------->ALFIN1   ----------->HVH21     --------->MYB52(2)--------->ANAC58 -----ANAC58           <---------ANAC58--------->ANAC58      --------->ARR11(3)     --------->ANAC58 -----ANAC46           <---------ANAC58--------->ANAC46      <---------ARR11(3) <-----------GT1 -----ANAC58       <----------DOF2     --------->ANAC58 <------ZmHOX2a(1)<---------At4g35610  <------   ttgttttgtttttccagaaggctttgtgtgtggaaagacagacgacatgaccggcataggagagatgttccttgcagcttttttacaagctctcttccag  4858000                      --------->HSFB2a(1)                      --------->HSFC1(2)                      <---------HSFB2a(1)                      <---------HSFC1(2)                                       <---------MYB46(3)                    <------ZmHOX2a(1)                                        <-------GAMYB                 <-----------RAV1(2)                                   <---------ALFIN1             <           ------->TEIL                                               <---------ZAT14          <----- -->HSFB2a(2)  <-----------HVH21                       <-----------GT1--------->ZAT14    <---------ICU4 ---HSFB2a(2) <----------DOF2                   --------->YAB1      ---------->CDC5      --------->MYB52(1)   acgctggtgtctgaacctttcaggagcttcttcaagaggcgagaactgaatgagaatttactcgagaggctcagcactgcgttgttgacaataactgctg  4858100                                        ----------->GT1                                       <---------ANAC46                                     <---------MYB46(3)                                     --------->MYB55(2)                                    <---------DEAR3(1)                                    --------->ALFIN1                                    <---------AtMYB61                                   <---------MYB52(1)             --------->ARR11(3)                                  --------->LBD16         <---------At4g35610                              <---------ARR14(2)          <---------ZAT2        <-------TEIL         <---------GLK1(1)            --------->ZAT2                           --   <---------WOX13(1) --------->At4g35610                 --------->At4g35610                      <- ---------YAB1<------ZmHOX2a(1) <---------LBD16      <---------DOF5.7(2)       --------->AtLEC2   --- -----DOF2 <---------At4g35610--------->ARR14(2)   --------->DOF5.7(2)    <-----------GT1        <---   ttctgatagatgcagaggagaagcagattacaaatccggtggtggaaaaatgggttaacgagctgagagatgttgtttaccatgctgaagatgctcttga  4858200                                                                      <---------ANAC58      <--------                                                                      <---------ANAC46      <--------                                       <---------ARR14(2)             <---------ANAC58      ---------                                  --------->ZAT2                   <---------GLK1(2)        <--------                                  --------->At4g35610             <---------ZAT2--------->HSFB2a(1)                                  <---------At4g35610             --------->At4g35610       ---------                            --------->TOE2(2)                     <---------At4g35610 --------->LBD16 ------->ARR11(3)  <---------ANAC58    --------->ARR14(2)    ----------->HVH21 <---------KAN4(2) <--- --------ARR11(3)  <---------ANAC58    ------->TEIL    ------->GAMYB <-------TEIL    <---------LBD16 ------>YAB1    ---------->CDC5 <------ZmHOX2a(1)   ----------->RAV1(1)       <---------GLK1(2)  <--- ------YAB1<---------GLK1(2)--------->TOE1(2)    ------>ZmHOX2a(1)--------->ZAT2<---------HSFB2a(1) -   tgatattgctacagaagctctgcgtctcaacataggagctgaatcttcttcctccaacaggctgagacagcttcgtggcagaatgtccctgggagatttt  4858300                                                                                               ------                                                                                   <---------TOE1(2)                                                                                  --------->LBD16                                                                                  ------>ZmHOX2a(1)                                                                                 --------->TOE2(2)                                                                                 <---------LBD16 -ARR11(3)                            ----------->GT1                           ----------->RAV1(2) -ARR14(2)                <---------LBD16                                     <---------ARR14(2) >ARR14(2)  <---------ZAT18   <---------ANAC58                                --------->ARR14(2) -GLK1(2)   --------->ZAT14   <---------ANAC58                                --------->ARR11(3) >ARR11(3)  <---------ZAT14 --------->LBD16                                   <---------ARR11(3) ------ANAC58           <---------ARR14(2)                                   --------->CCA1(1)------- ------ANAC58           --------->ARR14(2)      --------->MYB59              --------->RVE1(1)<------ -------->ATHB12       <---------GLK1(1)   --------->ICU4             ---------->DOF2     ---------->DOF2   cttgatgggaacagtgaacatttggagacccggcttgagaaggtcacaattaggctcgagcgtttagcctcacaaagaaatatcctgggtttgaaagagc  4858400  Previous    Next  AGI:  At3g14470.1    Description:  disease resistance protein (NBS-LRR class), putative. Identical to Putative disease resistance RPP13-like protein 1 (RPPL1) [Arabidopsis Thaliana] (GB:Q9LRR4); similar to disease resistance protein (NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT3G14460.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49684.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24729.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN77617.1); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Leucine-rich repeat-containing protein (InterPro:IPR015766); contains InterPro Range:  from: 4857947    to: 4861254    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version