Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             --------->LBD16                          --------->LBD16                         --------->HSFB2a(2)                         <---------LBD16                         <---------HSFB2a(2)                    --------->ALFIN1                  <---------ANAC58                  <---------ANAC58                  <---------ANAC46                --------->LBD16                                         <---------ANAC46                ------>NtERF2                                        <---------MYB52(1)               --------->ANAC46                             ------>ZmHOX2a(2)              <---------LBD16                             <---------ARR14(3)            ------>ZmHOX2a(2)                             --------->ARR14(3)           <------ZmHOX2a(2)                              --------->ARR11(3)           --------->GLK1(1)                              <---------ARR11(3)          <---------ARR14(2)                              --------->AGP1<---------AtLEC2          --------->ARR14(2)                              <---------ARR14(2)          --------->ARR14(3)                   --------->CCA1(2)<---------ALFIN1          <---------ARR14(3)                <------MYB83 <---------GLK1(1)          <---------ARR11(3)                <------MYB46(1)<------ZmHOX2a(2)          --------->ARR11(3)              <--------P     --------->GLK1(1)          --------->SPL7 <---------ZAT6<---------DEAR3(1)        <-------GAMYB  ----------->ARR10     <---------At4g35610 -At4g35610<---------GLK1(1)            <---------MYB46(3)--------->ARR14(2)  <---------ZAT2   ttagtgttttgagatctccggcgtgttcccggagagtttttttggttggatacaaatggagatcttccaccgtttcatggagctcgtccagcgtctcatc  4774700                                        ------>NtERF2                                        <-----------HVH21                                       <---------ANAC46                                       --------->O2                                       --------->bZIP60(2)                                       <---------bZIP60(1)                                      ------>NtERF2                                      <------NtERF2                                     <---------ATERF1(1)                         ------>NtERF2--------->RAP2.3(1)                        --------->RAP2.3(2)                        <---------ANAC46<-----------TGA1                        --------->DEAR3(1)                                                          -                        --------->RRTF1(3)                                                          <                        --------->RAP2.3(3)                                                        <-                       --------->ORA47(2)                                                          <-                       --------->ATERF1(1)                                                        <--                       --------->RAP2.3(1)      <----------DOF2               --------->ZAT14     <--                       --------->DEAR4(2)<------NtERF2                      --------->At5g28300 -----                       <------NtERF2<---------DEAR3(1)            <---------GLK1(2)            <-----                     --------->DEAR3(1)--------->bZIP60(1)       <---------At4g35610           ------                 ---------->DOF2   <---------LBD16   ------>ZmHOX2a(1) <---------REM1(2)      <------              --------->YAB1     <---------LBD16------>ZmHOX2a(1)--------->At4g35610         <-------   aatagtctccaaacagtcatgaagcgccgtcttctcgcgcggcgtcagtcctttcctcttcttgatcagcttcttcacggtgaagtaattgtgctccacg  4774800                                                                  --------->At4g35610                                                               <------NtERF2                                                               <---------MYB52(1)                                                              ------------>AtMYB77                                                              ------>NtERF2                                                             --------->DREB2C(2)                                                             --------->RAP2.3(2)                                                             --------->RAP2.3(3)                                                             <---------ATERF1(2)                                                             --------->DEAR3(1)                                                             <---------DEAR3(1)                                                             --------->ATERF1(2)                                                            <---------LBD16                                                            --------->ORA47(2)                                                            --------->RAP2.3(1)                                                            --------->ATERF1(1)                                                            --------->RRTF1(1)                                                            <------NtERF2                                                            --------->ERF1                                                           ------>NtERF2                                                           --------->ABI4(1)                                                          --------->DEAR3(1)                                                          <---------ATERF1(2)                                                          <---------DEAR3(1)                                                          --------->RAP2.3(3)                                                          --------->RAP2.3(2)                                                         --------->RAP2.6(1)                                                         --------->ATERF1(1)                                                         <------NtERF2                                                         --------->DEAR4(2)                                                         --------->RAP2.3(1)                                                         --------->ERF1                                                         --------->RRTF1(1)          <------MYB46(1)                                --------->ORA47(2)          <------MYB83                                  ------>NtERF2         --------->MYB111(1)                            <---------ATERF1(1)       <---------MYB52(1)                              <---------DEAR3(1)     <---------ZAT6                                    --------->ANAC46  --------->bZIP60(2)    <---------YAB1                               --------->At4g35610     --------->ANAC46 <---------MYB52(1)                              <---------At4g35610     --------->ANAC58 <---------ARR14(2)                             --------->MYB52(2)<-------GAMYB --------->ARR14(2)                           --------->DOF5.7(2) <---------At4g35610 -------->At5g28300                         ===============================MYC_MYB -------GAMYB                               ==============================MYC_MYB --------DEAR3(2)                           --------->TGA1a<---------ATERF1(1)          --------->At4g35610 --------MYB46(3)                           <---------TGA1a<---------RAP2.3(1)          <---------At4g35610 -------DEAR3(1)                            <---------O2<---------RRTF1(1)        --------->CCA1(2) -------ANAC46                              --------->O2<---------RAP2.3(1)   <xxxxxxxxxxxxxxxxxxsmallRNA(se3) ------->AtMYB77                   <----------DOF2     --------->DEAR3(1)--------->ANAC58 ----DEAR3(1)        ------>NtERF2 ===================bZIP_DOF--------->LBD16 <------NtERF2<--------- --->ANAC46  <-------TEIL       <---------ARR11(3)   <---------ALFIN1<---------At5g28300--------->ZAT2 ---LBD16--------->MYB46(2)     --------->ARR11(3)   <---------ATERF1(1)<---------LBD16 <---------ZAT2 --ALFIN1--------->MYB59    ----------->HVH21 <---------MYB52(1) <---------MYB46(3)<-------TEIL    <-   gcggttattgttaggttcaccgatgcctcgatgacatctttttgcgacgttagctcgacgccgccggcagttaccacggcagagatacagagctcagggt  4774900                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                    -                                                                                                    <                                                                                                   <-                                                                                                   <-                                                                                                   <-                                                                                                   <-                                                                                                  ---                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                                                                -----                                                                                                <----                               <-----------HVH21                                                <----                    ------>ZmHOX2a(2)                                                          <-----                  <---------ARR11(3)                                                       --------->LBD16                  --------->ARR14(2)                                                       ------>NtERF2                  <---------ARR14(2)                                                      <---------LBD16                  --------->ARR11(3)                                                   --------->ARR14(2)       --------->ZAT2         <---------ANAC46                                 ------>NtERF2   ------       --------->At4g35610    <---------ANAC58                                 ----------->RAV1(1)<--       <---------At4g35610    <---------ANAC58                                 --------->LBD16------>NtERF2       <---------ZAT2      <---------DEAR3(1)                                <---------LBD16---------      <---------ARR14(2)   --------->ANAC46                                <---------ARR14(2) <------      --------->ARR14(2)   --------->ANAC58                                --------->ARR14(2)--------   --------->ALFIN1<------ZmHOX2a(2)                                      <---------ZAT2 <---------LBD16  <-------MYC3    <-----------ARR10                                       --------->At4g35610--------  ------->MYC3    --------->GLK1(2)                                <----------DOF2     --------->GLK1(2) <---------ANAC46 <---------ARR14(3)                              <---------ANAC58     <---------ARR14(2) >>>>>>>>CAMTA3   --------->ARR14(3)    <---------ANAC46      <---------MYB52(1)      <---------GLK1(2) --RAV1(2)<-------TEIL     --------->ANAC58      <---------ZAT6   <---------ANAC58 <------NtERF2<---- --------ANAC46  <------ZmHOX2a(1)   ----------->HVH21       <-------GAMYB<---------At4g35610<-------   aacgcgtggagctgcatgaggatcttagcacggcgtgagacgacggggatagagttcgtttttcgttggcttttgaagctccggcagagattccggcgac  4775000  <---------ARR14(2)  --------->ARR14(2) <------NtERF2 --------->At4g35610 <---------At4g35610           ----------->GT1 --------->ATERF1(1)         <---------ARR14(2) ---------DEAR3(2)           --------->ARR14(2) ---------ERF1             <---------MYB46(3) ---------ATERF1(1)       <---------ANAC46 ---------MYB46(3)       <------NtERF2 ----->NtERF2            <---------At4g35610 ---------RAP2.3(1)      <---------LBD16 --------DEAR3(1)        --------->ATERF1(1) --------ANAC46         <---------DEAR4(2) --------RAP2.6(2)      <---------ATERF1(1) --------RAP2.3(2)      ------>NtERF2 ------>ATERF1(1)       <---------ERF1 ------DEAR4(2)         <---------RAP2.3(1) -->NtERF2              <---------ORA47(2) ------ERF1             <---------RAP2.6(1) ------RAP2.3(1)        <---------RRTF1(1) ------RRTF1(1)        <---------RRTF1(3) ------ATERF1(1)       <---------RAP2.6(2) ---->O2               --------->DEAR3(1) -----DEAR3(1)         <---------RRTF1(2) -----O2               <---------ATERF1(2) -NtERF2               <---------RAP2.3(2) --->ATERF1(1)         <---------DREB2C(2) ----NtERF2            <---------RAP2.3(3) >ATERF1(1)            <---------DEAR3(1)                                                      <----- ---ATERF1(1)         <---------ABI4(1)                                                       ------>NtERF2 --->HVH21            --------->ATERF1(1)                         <----------DOF2       --------->YAB1 ->DEAR3(1)          <---------RAP2.3(1)     <---------ANAC58   <---------YAB1        <---------WOX13(1) -----RAP2.3(2)     <---------DEAR3(1)       <---------ANAC46  <---------ARR11(3)   --------->ATHB12 --DEAR3(1)  ---------->DOF2<------NtERF2    <---------ANAC58  --------->ARR11(3)<----------DOF2   ggcggctacgaagagcaaagctacggcggcggatagcaaaacaagtttcttgtttttcttgaaattatctttagaaaaaatttctttcattgatggtgcc  4775100                                                         <--------HAHB4                                                         --------->ATHB51                                                         <---------ICU4                                                         --------->YAB1                                                         <--------ATHB1                                                        <---------YAB1                                                        <---------ATHB51                                                      --------->YAB1                                                     <---------AHL20(2)                                                 <-----------TBP                                                 --------->AHL20(2)                                               <-----------TBP                                           <---------ANAC58                                           <---------ANAC58   <---------YAB1                        -                                           <------MYB83 --------->ICU4                              <                             ------->TEIL  <------MYB46(1) --------->ICU4             --------->ANAC58                          *TSS            --------->MYB55(2)<---------ICU4            --------->ANAC46                         ------->TEIL     <---------MYB46(3)--------->YAB1            --------->ANAC58                   <---------YAB1        --------->ALFIN1-------->HAHB4    <---------AHL20(2)   -----      --------->ZAT6  <---------YAB1   --------->ALFIN1 --------->AHL20(2) --------->AHL20(2)   <---- -NtERF2           --------->ICU4  --------->REM1(2)--------->AHL20(2)    --------->AHL20(2)   ------   attgttcgacactagtgagtgatgatgaatgtactcgtgaagagtgggtgtttatataataattatgttgatgaaattaaaatcaaacacgatactattt  4775200         <---------DAG2         <----------DOF2        <---------ANAC58        <---------ANAC58    <---------ANAC58                                               --------->ZAT2 -------->AHL20(2)          <---------ANAC58 <---------ANAC58                    ----------->GT1 ---------AHL20(2)      <----------DOF2      <---------ANAC58             >>>>>>>>>>>>>>>>>LFY ---->AHL20(2)          <---------DAG2       <---------ANAC46             <<<<<<<<<<<<<<<<<LFY------>NtERF2 -----AHL20(2)       <-----------GT1  <---------YAB1                   <---------HSFB2a(1) <---------At4g35610 --->AHL20(2)    <------------------------ANAC81                       --------->HSFB2a(1) --------->At4g35610   atttaaaatggctttttctggttttacttttcttgattctattatttgagtggaattttcagaaaaacaaaaaacgttccactgggttatataagctgcc  4775300                ------>ZmHOX2a(2)               <------ZmHOX2a(2)              <---------ARR14(2)              --------->ARR14(2)              <---------ARR14(3)              --------->ARR14(3)              --------->ARR11(3)              --------->AGP1              <---------ARR11(3)              <-----------ARR10                          --------->LBD16            ----------->ARR10                           --------->ANAC58          --------->CCA1(2)                    --------->YAB1        --------->YAB1                    <---------AHL20(2)         <------ZmHOX2a(1)     ---------->DOF2                      <---------YAB1--------->ANAC46  --------->ANAC58                 --------->YAB1       --------->ANAC58  --------->ANAC58    <----------DOF2 <---------GLK1(2)<---------LBD16         ---------->ID1   tcgctcgtaaagataagatcttcgttttatgttttaatcagaatattattcatattatacggaaattgacaggagtctattgtcgtttttgtatttttgt  4775400                               <---------ANAC58                                                   ---                          <---------MYB46(3)                                                      <--                 <---------MYB59<----------DOF2                          ------>ZmHOX2a(1)        <--                 --------->TOE2(3)                                      --------->TOE2(3)     <------ZmHOX2a(1)                <---------ANAC55(2)                                  <-----------GT1      --------->TOE1(2)              <-----------GT1  <---------ANAC58                  <-------MYC3<-----------------AG ---          <---------AHL20(2)<---------MYB52(1)                   ------->MYC3========================        --------->ANAC55(2) ---------->ID1    ------->TEIL    <---------ALFIN1        <------ZmHOX2a(1)   aattttgtatatgtaattacctaaatattcgttgctttgccagtgatgaactcaccagtctcgtccacgtttatcctcatacacattaggaaactaggat  4775500             ----------->RAV1(1)            <---------ETT(1)            ------->GAMYB            --------->DREB2C(2)           --------->MYB46(3)           --------->DEAR3(2)         --------->MYB52(1)      --------->TOE2(3)     --------->YAB1     <--------HAHB4                                          <---------YAB1    <---------YAB1          <----------DOF2                  --------------->AGL15  --------->YAB1           --------->TOE2(3)            <----------DOF2 <---------AHL20(2)        <---------DAG2        --------->KAN4(2) ------>AHL20(1)        <-----------GT1          --------->ARR14(2)             <-----------TGA1    < -------AHL20(1)   --------->AHL20(2)           <----------TaMYB80          <---------MYB52(1)      - -------AHL20(2)   --------->YAB1         ---------->DOF2    <---------------AGL15                  - ------>AHL20(2)--------->YAB1    <----------DOF2<---------ARR14(2)<-----------GT1 --------->WOX13(1) ============================================================================MADS_MADS   --------->MYB46(3)   tatattatcattaaccgacaataatataacctttttctttactaaaaagcatattcttcttttctgattttagtattcgtttcgtcattcaaccaatttg  4775600  Previous    Next  AGI:  At3g14310.1    Description:  ATPME3 (Arabidopsis thaliana pectin methylesterase 3). similar to ATPME2 (Arabidopsis thaliana pectin methylesterase 2) [Arabidopsis thaliana] (TAIR:AT1G53830.1); similar to pectin methyl esterase [Solanum tuberosum] (GB:AAF23892.1); similar to pectin methyl-esterase [Nicotiana benthamiana] (GB:AAO85706.1); similar to pectin methylesterase [Nicotiana tabacum] (GB:CAB95025.1); contains InterPro domain Pectin lyase fold (InterPro:IPR012334); contains InterPro domain Pectinesterase, catalytic; (InterPro:IPR000070); contains InterPro domain Pectin lyase fold/virulence factor (InterPro:IPR011050); contains InterPro domain Pectinesterase inhibitor; Range:  from: 4771909    to: 4775126    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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