Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   --------->ZAT18                                                                 <-------TEIL                        <---------CCA1(2)             --------->ZAT6               --------->MYB52(1)                    <---------YAB1            --------->At4g35610                --------->ICU4  ------->PIF5                    ------   --------->HSFC1(2)<-------TEIL              <---------AHL20(2)--------->ZAT14             <------- ---->At4g35610---------->DOF2          ---------->DOF2        <-------PIF5    <-----------TGA1------ >ARR10    <---------ARR11(3)  <----------DOF2 --------->AHL20(2)<---------ZAT18 --------->ATHB12   ctcgaagtttcaagagctaaaggctcatatcgcctttatattcaaagaaaaaattatcagtagcaagtgcattcttcatttcgtcattggagaaacctac  4389300                                                                          <-----------HVH21                                --------->ATERF1(1)                 <---------MYB52(1)                                <------NtERF2                      --------->LBD16                               ------>NtERF2                       <---------At4g35610                   <-----------GT1 <---------CCA1(2)             --------->SPL7<----------DOF2                <---------KAN4(2)<---------ALFIN1               <---------MYB52(1)             --------->LBD16  --------->DEAR3(1)               <-----------HVH21            --------->ANAC46  --------->ANAC46             <---------ALFIN1 <-----------GT1            --------->HSFB2a(2)<---------ATERF1(1)   <---------MYB52(1)<---------ANAC58         --------->ARR14(2)  ---------->ID1 ------>ZmHOX2a(1)  <---------SPL7  <---------DAG2      --    ------>ZmHOX2a(1)        --------->RAP2.3(1)    --------->LBD16--------->At4g35610           ---- >MYB46(1) <---------LBD16  <---------RAP2.3(1)     <-----------HVH21  <---------ANAC58        <----- --MYB59 <---------ARR14(2) <---------ATERF1(1) --------->DEAR3(1)<---------MYB46(3)           ------ >MYB83------>ZmHOX2a(1)   <---------DEAR3(1)<---------ALFIN1 --------->DEAR3(1)       <---------ATHB12   ttcttcctccttatccggaataaacctcttcggcgccatctctctcctcacctccgtcgttccaccgtccggtgagtgtcacttttcccatcaattgagc  4389400           <------NtERF2          ------>NtERF2         <---------ANAC46         <---------RAP2.6(2)        --------->ATERF1(1)        <------NtERF2                <---------WOX13(1)       <---------ATERF1(1)       <---------WOX13(1)      <---------DEAR3(1)        <------------CBF   <-----------RAV1(1) <---------ANAC46                                              --------->DAG2 ---------->CBF        <---------ANAC58                                     --------->At4g35610 ----->ZAT18           <---------ANAC58           <------------CBF          <---------At4g35610 ----At4g35610     <------------CBF <------------CBF             <---------ICU4     ---------->DOF2 --->At4g35610   <---------AHL20(2)--------->ATHB12        <-----------GT1  --------->ZAT2   <-------   tcacaatgttggcgcctatgtaattgtgtgtgtcgattgattgttttgttagaattggaattaacaagtattactagtagctgagaaaaagtatgttacc  4389500                 <---------ARR14(2)                 --------->ARR14(2)               ----------->ARR10             --------->LBD16            --------->LBD16           --------->HSFB2a(2)                                  <---------At4g35610           <---------HSFB2a(2)                                  --------->At4g35610    <---------ANAC58            <---------REM1(1)      <---------LBD16    <---------ANAC58  ---------->ID1               --------->ARR14(2)                  <---------MYB52(1)    <---------ANAC46<-----------RAV1(1) <---------AtMYB61  <------------CBF        <---------At4g35610 ----GT1   <---------LBD16 <------------CBF        <---------ARR14(2)           <-------TEIL       <-   ttgttttcgtgttcccggagatttgtggctattggtgtagttgtggttttgagtatttggggattgagctctgattttgaaattcatctgttttttgttt  4389600                         <----------DOF2                <---------MYB46(3)              <---------WOX13(1)                  --------->ZAT14             <------------CBF                     <---------ZAT14            --------->ATHB12               <----------DOF2           <---------AHL20(2)     --------->GLK1(2)   <-----------RAV1(1)           <---------YAB1<---------DAG2 <---------ANAC58     <---------WOX13(1)  ----------->GT1        <XXXXXXXXXXXXXXXXXXXXMIR841     <---------ANAC58    <------------CBF <---------HSFB2a(2) ----------RAV1(1)<--------P      ------->TEIL    --------->ZAT18  <XXXXXXXXXXXXXXXXXXXXMIR868<------NtERF2   tttgttgccagttttaattggttagtacttttggtgaatctttcgttttatgtgaactgttggattgattttcagtgtttgagaagtgaaaatggcatcg  4389700                     <---------MYB46(3)                   <---------MYB52(1)          --------->O2        <---------ANAC58          <---------O2        <---------ANAC58          --------->TGA1a     <---------ANAC46          --------->bZIP60(2)--------->MYB52(2)          <---------TGA1a    <---------MYB46(3)          --------->ANAC58 <---------MYB52(1)          ========================MYC_MYB          --------->ANAC58<-------GAMYB                                                            --        <---------ALFIN1 --------->MYB52(2)                           <---------CCA1(2)     <------ZmHOX2a(1)      <-----------HVH21  <---------MYB46(3)              --------->At4g35610                =========   <---------At5g28300  <-------TEIL                     <---------At4g35610                =========   acattcactgccacgtcttcccttggttcgttgcttgctcccaatgctatcaagttgtcttctgcgactagcatctcttcaagctcgtttggaaggagac  4389800                --------->ARR14(3)                <---------ARR14(3)                <---------ARR11(3)                --------->ARR11(3)                <---------ARR14(2)                --------->ARR14(2)               <---------HSFB2a(1)               --------->HSFB2a(1)            <---------At4g35610          <-----------RAV1(2)        <-----------HVH21       <---------ANAC58       <---------ANAC58     --------->ALFIN1   --------->ALFIN1      ------>ZmHOX2a(1) <---------ANAC55(1)   --------->SPL7 <---------ANAC58 ------>ZmHOX2a(2)                                                        --------->At4g35610 <---------ANAC58 ==============HOX2a_HOX2a                                              <-----------RAV1(2) <---------ANAC46===============HOX2a_HOX2a                                          --------->HSFC1(2) <---------ANAC55(2) <-----------HVH21                                               <---------HSFC1(2) ------->MYB52(1)<------ZmHOX2a(2)       ------>NtERF2           <------ZmHOX2a(1)<------ZmHOX2a(1) - =======================HOX2a_HOX2a   --------->At4g35610      <---------TOE2(3) ----------->GT1    < ========================HOX2a_HOX2a  --------->ZAT14         --------->YAB1--------->YAB1 <---------At4g35610   ataacgtgtgcgtcagaagatcccgtcctgccatagtatgtgcagccaaggagttgcatttcaataaggatgggactaccataaggaaacttcaggtgag  4389900                                  <-------TEIL                                <---------GLK1(2)                                --------->ARR14(2)                                <---------ARR14(2)                               <------ZmHOX2a(1)                         --------->ATHB12                                                       -----                         -------->HAHB4                                                         <----                         --------->YAB1                                                         -----                <---------HSFB2a(2)                                                            ------                --------->HSFB2a(2)                                                           -------               <---------LBD16<---------YAB1                                   <---------ZAT6 -------    <---------AHL20(2)   <---------ICU4                          <---------MYB46(3)         <--------  <---------TOE2(3)     <---------ATHB12                         --------->MYB52(2)     --------->ZAT2 -------->AHL20(2)      --------->ICU4               <---------YAB1<---------YAB1      --------->ANAC58 ---------AHL20(2)      <---------YAB1    <---------YAB1       <---------MYB52(1)      --------->ANAC58   aattaatgaattgattttctggagtaatgattaggattcgttttatttttggtttctgattactcgtttgttattagactggtgttaacaagctcgcgga  4390000      --------->bZIP60(1)                                                         <-----------HVH21    <------MYB83                                                                 <---------bZIP60(1)    <------MYB46(1)                                                              --------->bZIP60(1)   <---------AtMYB61                                                        -------->HAHB4  <--------P                                                                <---------ICU4 ---->ARR14(2)                                                            <---------TOE2(3) -----ARR14(2)            <----------ID1                               <---------YAB1              <- -->TEIL              ---------->DOF2                      ------>ZmHOX2a(2)--------->YAB1         <- >NtERF2----------->HVH21 ----------->GT1                 <------ZmHOX2a(2)<---------YAB1   <-------- -->DEAR3(1)       ----------------->AGL1                --------->ARR14(2)--------->ICU4   <-------- -->LBD16  <---------ALFIN1      <-----------RAV1(1)     ------->TEIL----------->GT1   <-----------RAV1(1) -LBD16<-----------HVH21--------->DAG2                   <---------ARR14(2)<---------ATHB12 <--------   ccttgttggtgtcacacttggaccaaaagggagaaatgttgttcttgagagcaagtatggatccccaagaattgttaatgatggtgtcactgttgcgagg  4390100                                        <---------ANAC58      --------->TOE1(3)                                        <---------ANAC58     --------->At4g35610                                    <---------ANAC58        <---------TOE1(3)         --------->AHL20(1)         <---------ANAC58    --------->HSFB2a(2)       <---------AtMYB61<- -----MYB83               --------->WOX13(1)      <---------AHL20(2)              --------->MYB59<--- -----MYB46(1)        <-----------GT1<----------DOF2    <---------HSFB2a(2)   <---------At4g35610---- -ANAC58 <---------AHL20(2)  --------->YAB1       <-----------GT1          <---------At4g35610   ---- -ANAC46 --------->AHL20(2) <---------ATHB12  <---------AHL20(2)  <---------TOE1(3)             <---- -ANAC58 <---------AHL20(1) <---------ATHB51  --------->AHL20(2)  <---------TOE2(3)        --------->ALFIN1   gaggtatgaaatttattgtctgtttaaccaattatgttcctttcgtttttaattacttctctaagcttaaggttttcttctgcttaggtcgagttggagg  4390200  Previous    Next  AGI:  At3g13470.1    Description:  chaperonin, putative. similar to CPN60B (CHAPERONIN 60 BETA), ATP binding / protein binding / unfolded protein binding [Arabidopsis thaliana] (TAIR:AT1G55490.1); similar to CPN60B (CHAPERONIN 60 BETA), ATP binding / protein binding / unfolded protein binding [Arabidopsis thaliana] (TAIR:AT1G55490.2); similar to ATP binding / protein binding / unfolded protein binding [Arabidopsis thaliana] (TAIR:AT5G56500.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO22112.1); similar to RuBisCO large subunit-binding protein subunit beta, chloroplast precursor (60 kDa chaperonin subunit beta) (CPN-60 beta) (GB:P21241); similar to unknown [Pop Range:  from: 4389692    to: 4392858    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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