Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       --------->LBD16                                                                    --------->ANAC58                                                       <---------AHL20(1)                                                       <---------AHL20(2)      ----------->RAV1(1)                              --------->ARR11(3)   --------->ANAC46                                    <---------ARR11(3)                       <----   --------->ANAC58                             <---------HSFB2a(2) --------->ANAC46           ------   --------->ANAC58                      --------->MYB52(1)         --------->ANAC58           ------ ----->YAB1                              ------>MYB46(1)        <---------GLK1(1)              <----- -----ATHB12                             ------>MYB83  --------->AHL20(1)                      <----- -->WOX13(1)   ------->TEIL            <---------MYB59 --------->AHL20(2)    ------->TEIL     ------- -ATHB12    <---------ATHB12 <---------YAB1--------->MYB46(3)   --------->GLK1(1) --------->ANAC46   caaactcgccacaaatgaatcgatttgaatcaatatagaaacctaacaatcgagaaatatattgagaaacccgaaactgaatctaggcaatatcaaatat  4388100                                                    <------ZmHOX2a(2)                                                   <---------ARR11(3)                       ---------                                              <-------TEIL                                  ---------                                   <---------ARR11(3)                   ==========================HOX2a_HOX2a                                   --------->ARR14(2)                   <------ZmHOX2a(2)   <--------                                   --------->ARR11(3)                  <---------ARR14(2)  <------ZmHOX2a(1) -----CCA1(2)                      <---------ARR14(2)                  --------->ARR14(2)  ========== --->ARR11(3)        <---------ZAT14--------->CCA1(2) <---------HSFB2a(2) <---------HSFB2a(2)     === --->AHL20(1)        --------->ZAT14<------ZmHOX2a(2) --------->HSFB2a(2) --------->HSFB2a(2)-------- ----AHL20(1)      --------->At4g35610 ----------->RAV1(1)   --------->YAB1        ---------->DOF2<-- ----ARR11(3)      --------->ZAT2  --------->AGP1  --------->ARR11(3)  --------->AGP1  ---------->DOF2 -->AHL20(2)       <---------At4g35610 --------->MYB52(1) --------->GLK1(1)     --------->YAB1    ===   atctgaacaagactcaaaatcagctcactggattcaagatccaacagattcaagatcgagaaatcaaaacacagatcgagaaacataaagaaaggatacg  4388200                                                                --------->HSFB2a(2)                                                                <---------HSFB2a(2)                                                             ------>ZmHOX2a(1)                                                           --------->HSFC1(2)                                                           ------>ZmHOX2a(2)                                                           <---------HSFC1(2)        <------ZmHOX2a(1)                                 <------ZmHOX2a(2)      --------->ALFIN1                                   <---------GLK1(2)     <------ZmHOX2a(1)                         --------->ARR11(3)  <-----------RAV1(2)                        ----------->ARR10  <---------LBD16 --------->At4g35610              <-------TEIL --------->ARR11(1) <---------At4g35610             --------->CCA1(2)       --------->ARR11(3) --------->ZAT2                 --------->ARR11(1)       <---------ARR14(2) >ARR14(2)                      --------->ARR14(2)       --------->ARR14(2) >ARR11(1)                      <---------ARR14(2)       <---------ARR11(3)                        >> -ARR14(2)                     <---------GLK1(1)--------->CCA1(2)                                  -- ====HOX2a_HOX2a               <---------HSFB2a(1)     ----------->ARR10   <---------------------WRI1 ===========HOX2a_HOX2a      <------ZmHOX2a(1) <---------ARR14(2)        --------->DAG2         ----- ->CCA1(2)  --------->MYB52(1)----------->ARR10--------->ARR14(2)      ---------->DOF2      --------- ----ZmHOX2a(2)------->GAMYB =====================================HOX2a_HOX2a         ---------->DOF2 ==============HOX2a_HOX2a   ====================================HOX2a_HOX2a         --------->AtMYB61   atcagcaggaggagcaacggtagccatgagaggagattcgacaaacaaagatttggatagatccttctcggataaaaggggatgcgaccaaagagaaaga  4388300                                             ===================HOX2a_HOX2a                              --------->TOE2(3)                              <---------------AGL15      ----------->GT1         --------------->AGL15     >>>>>>>>>TBF1           ----------------->AGL2  >>>>>>>>>TBF1              <-----------------AGL1      <------ZmHOX2a(2) >>>>>>>TBF1         --------->CCA1(2)       <------ZmHOX2a(1) ---------------------->ANAC81--------->TOE1(3)         --------->AGP1 ------------------->ANAC81--------->GLK1(1)----------->GT1                                       --- ->DOF2      ---------->DOF2 <-----------------AGL3     <---------ARR11(3)                   --------   agaagaagaagaaaaaaaagaagatagagaaaccctaaatggaatcaggaaaaacccagatcaaatctagggtttaagagatagaatagaagagagaaag  4388400                   <------NtERF2                  ------>NtERF2                  <---------RAP2.6(3)                 --------->RAP2.3(3)                 --------->RRTF1(3)                 --------->RRTF1(2)                 --------->DREB2C(2)                 --------->ATERF1(2)                 --------->RAP2.6(2)                 --------->DEAR3(1)                 --------->RAP2.3(2)                 ------->GAMYB                 <---------ATERF1(2)                 --------->ANAC46                --------->MYB46(3)                --------->RAP2.3(1)                --------->ERF1                --------->ATERF1(1)                --------->RRTF1(1)               ------>NtERF2               --------->At4g35610               <---------At4g35610               <---------ATERF1(1)               <---------ZAT2               --------->ZAT2              --------->DEAR3(1)                     <------ZmHOX2a(1)             <------NtERF2                          ----------->GT1             --------->ATERF1(1)                    <----------ID1             <-----------RAV1(2)                   ----------->GT1             --------->RAP2.3(1)             --------->LBD16            <---------At4g35610             --------->HSFB2a(2)            <------NtERF2                   <---------LBD16            <---------ATERF1(1)            <---------LBD16                                          <            --------->At4g35610            <---------ANAC46                                        --           --------->RAP2.6(2)            <---------LBD16                                          <-   --------->AHL20(2)                   <---------ANAC58   --------->DAG2                          -- -------->GT1--------->ERF1<------ZmHOX2a(1)<---------HSFB2a(2)      ---------->ID1                <- -->DOF2  <---------RAP2.6(2)           <---------ANAC58  ---------->DOF2     --------->AtMYB61    --   aagaaaaaaatggccgcagccgccaagaaggagaagggttttgcttcggggaagaggaaaaaaagggttttgtctctctacctctccctctgattcaaat  4388500                <---------ALFIN1                --------->AtMYB61               --------->ANAC46               --------->bZIP60(2)             <---------ALFIN1             ------->GAMYB            --------->MYB46(3)            <---------MYB55(2)                                              <-----------GT1           -------->P                                                    <---------RVE1(1)          --------->WOX13(1)                                             <---------CCA1(1)          <-----------GT1                                               <---------AHL20(1)        <---------ATHB12         <------------------------ANAC81        <---------ARR11(3) ------ZmHOX2a(2)            <----------DOF2    <------------------------ANAC81 ------->ARR11(3)           <------------------------ANAC81             --------->ARR11(3) --------ARR11(3)        <------------------------ANAC81          --------->TOE1(3) ------->ARR14(2)    <---------DAG2         <----------DOF2       <---------DAG2  <----------DOF2 --------ARR14(2) <---------ALFIN1      <----------DOF2           --------->TOE2(3)         --------- ------->AGP1--------->AtMYB61  *TSS <-----------GT1           <---------ALFIN1 ------>ZmHOX2a(1)   agatccactaatcaaccacctcaccttctctcttttttttttctttctttttttttttttttcttccaccttaagatatttcctcttttgttttaaaaga  4388600                                                    <----------DOF2                                                    <---------DAG2                                     --------->ARR14(2)                                     <---------ARR11(3)                                       -------                                     <---------ARR14(2)                                      <-------            <---------AtMYB61        --------->GLK1(2)                                <---------AHL20(2)          --------->ALFIN1           --------->ARR11(3)                               <---------AHL20(1)          <---------MYB52(1)   ------>ZmHOX2a(1) <-----------GT1 <---------------AGL15--------->AHL20(1)        <---------ANAC58       --------->AtLEC2 <---------AHL20(1) <---------YAB1     --------->AHL20(2) ->DOF2 <---------ANAC58<---------YAB1   ----------->GT1       --------->TOE2(3)----------->GT1 <----   agactatagaccgtgtggttttggttatttttcctgcaaaatctggataatatacttttccattttcttaaaattggtaatcttgtaataaaatagatat  4388700                                                     --------->ANAC58                                          <<<<<<<<<<WRKY26                                          <<<<<<<<<<WRKY43                                 --------->AHL20(2)---------->DOF2                             ---------->DOF2     <---------AHL20(2)          --------->YAB1   <------                      <---------AHL20(2)  <<<<<<<<<<WRKY38                  <---------YAB1    -------                      <---------YAB1    <------MYB46(1)                   --------------->AGL15 --------->TOE2(3)   <---------AHL20(1) ----------->GT1                   <---------------AGL15 -->CCA1(2)          --------->AHL20(1) <------MYB83 --------->ANAC58    <-----------------AGL3   <-- --ARR11(3)          --------->AHL20(2)--------->MYB59   ---------->DOF2 <-----------------AGL2  ---- -----AHL20(2) <---------MYB59 ----------->GT1  --------->AHL20(2)    <----------DOF2--------->ALFIN1   aaatctcaattctgttaccaaaatataattcaaaagtaaatttggtcaaatttaaaagcaaaagagggcatgctttctattataggtgtgtttcttctat  4388800                                     --------->AHL20(1)                                   <---------AHL20(1)                                   --------->AHL20(1)                                  --------->AHL20(2)                          --------->TOE2(3)                                                <---------YAB1                       --------->AHL20(1)                                                  <---------TOE2(3)                       <---------ARR11(3)                                             <---------ICU4                       <---------AHL20(1)                                            <---------ATHB12   <---------At5g28300 --------->ARR11(3)                                            --------->ICU4  <-----------GT1     --------->CCA1(1)       <---------DAG2                   --------->ANAC58 ---HSFB2a(2) >>>>>>>>>EIN3     --------->AHL20(2)                             --------->ANAC58 -->HSFB2a(2)<-------TEIL <----------DOF2     <----------DOF2                ---------->DOF2 -------AHL20(2)      --------->RVE1(1)    <-----------GT1          --------->AHL20(2)--------->ATHB12 ----->AHL20(2)   --------->AHL20(2) <---------AHL20(1)             <---------AHL20(2)--------->YAB1   aaatttaccccaatatacattgaaatatctttaaaaatatatattaaacttttttgttttgagcaactatttaaaaactaaaagcaaatcattaagataa  4388900                                            <---------STY1(2)                                    --------------->AGL15                                    <---------------AGL15                 <------ZmHOX2a(1)         <                                   ----------------->AGL3            <----------DOF2              ---             --------->ARR11(3)    ==================================================================             <---------ARR11(3)    ----------------->AG        <---------DAG2                 -------       ----------->GT1             ----------------->AGL2   <-----------GT1         ----------->GT1--     ---------->DOF2              -------->P--------->STY1(2)  <----------DOF2---------->DOF2 ------- ---------->DOF2             <-----------ARR10        --------->AHL20(2)<---------TOE2(3)  <---------   aaccaaagaaagtaaaatctatttttcagagaaacttaccaaaactagctattcaagaaaatatactttacctttaggataaaaggaagtaaattacctt  4389000  Previous    Next  AGI:  At3g13460.1    Description:  ECT2; protein binding. similar to ECT4 [Arabidopsis thaliana] (TAIR:AT1G55500.1); similar to unknown [Populus trichocarpa x Populus deltoides] (GB:ABK96645.1); contains InterPro domain YT521-B-like protein (InterPro:IPR007275) Range:  from: 4384721    to: 4388532    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version