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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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      --------->ARR11(3)
      <---------ARR11(3)        <---------AHL20(2)
      <-----------GT1          <---------AHL20(2)
     --------->YAB1         --------->AHL20(2)
------At4g35610             <---------AHL20(2)
------ZAT14            <---------YAB1                              --------->GLK1(2)
----->ZAT14           <---------AHL20(2)                         <---------ATHB12
------ZAT18         <---------YAB1                   <---------ARR11(3)                    <------ZmHOX2a(1)
->AGL15           <---------AHL20(2)                 --------->ARR11(3)       <---------DAG2    ----
--AGL15          <---------AHL20(2) <---------AHL20(2) --------->TOE2(3)      <----------DOF2<------ZmHOX2a(2)
-->AGL3  <----------DOF2<---------AHL20(2)          --------->YAB1--------->YAB1       ---------->DOF2
 
gcagactattatcttttttttttatttttatttttttatttttttgggcagactattatcttatttcaataatctgcataactttttttttaaaggatca  4354700
                                          --------->YAB1
                                         <---------YAB1                                         <---
                                       --------->YAB1               <---------YAB1              ----
                                      <---------YAB1               --------->AHL20(2)           <---
                     <-------TEIL  <---------AHL20(2)              <---------AHL20(2)     <------MYB83
              --------->AtLEC2     --------->AHL20(2)             --------->AHL20(2)      <------MYB46(1)
              --------->ANAC58     --------->AHL20(1)   --------->ARR11(3)               --------->MYB59
------>DOF2   --------->ANAC58    --------->AHL20(2)    <---------ARR11(3) ---------->DOF2----------
 
aaagaagattgaataacatgcaagttcatttttgaaattttattatcaaaaacatggaagttcttaaaattaaaattacaaagcatattaagttggtaat  4354800
                                   <---------YAB1
                                  <---------AHL20(1)
                                  <---------AHL20(2)                                              --
                         --------->TOE2(3)                 ------->GAMYB                         <--
          --------->ANAC55(2)   <---------AHL20(2)  <---------ICU4                               ---
          <---------ANAC58      <---------YAB1      --------->YAB1                          <-------
          <---------ANAC58  --------->YAB1         --------->ICU4                           <-------
          <---------ANAC55(2)  <---------AHL20(1)--------->YAB1        --------->AHL20(1)   <-------
------AHL20(2)     --------------->AtSPL8    --------->LBD16   <---------ZAT2             <---------AHL20(2)
----->AHL20(2)     <---------------AtSPL3   <---------ANAC58   --------->At4g35610        <---------
------AHL20(1)     <---------------AtSPL8   <---------ANAC58   --------->ZAT2<----------ID1 --------
->GT1   <-----------GT1  --------->YAB1     <---------ANAC46   <---------At4g35610  --------->YAB1<-
 
taattctgtagttacttactaagttgtaccataatattattttttgtccgtgtaataatcaaccgtagctgaaatatgttaagacaaacaaaattacttg  4354900
                                                            ------>ZmHOX2a(2)
                                                           --------->ARR14(1)
                                                           --------->CCA1(2)
                                                           <------ZmHOX2a(2)
                                                          --------->ARR14(2)
                                                          <---------ARR11(3)
                                                          --------->ARR11(3)
                                                          <---------ARR14(2)
<---------bZIP60(1)                                       --------->AGP1
--------->bZIP60(1)      <---------ANAC58               ----------->ARR10          <---------GLK1(1)
------->YAB1     <---------AHL20(2)            --------->YAB1            --------------->AGL15
-------YAB1   --------->MYB52(2)               <--------ATHB1            ===========================
------>ICU4   <---------MYB46(3)              <---------ATHB12           <---------------AGL15
--ANAC58      --------->MYB111(1)          <---------------AGL15     <---------ZAT18
--ANAC55(2)   --------->MYB46(2)           --------------->AGL15     --------->ZAT18
--ANAC58  <---------MYB46(3)              ----------------->AGL2    <---------ANAC58               <
--GT1    <---------ANAC46<---------ANAC58 ==========================================================
->ANAC55(2)   ----------->GT1<----------DOF2  <---------ATHB51      <---------ANAC46           -----
--------ICU4 <--------P ---------->ID1    ----------------->AGL3    <---------ANAC58  <---------LBD16
 
atgatgacacttgtgggtagttaatttggcttctttagagacatgtccaataatagaataagatccgagttgtgtgctcgttagagaaatcgggagtcct  4355000
                                        ---------->DOF2                             <-------TEIL
                                     --------->ANAC58            ---------->DOF2   --------->AtLEC2
                                     --------->ANAC55(1)    <---------ANAC46      --------->LBD16
                                     --------->ANAC46       <---------ANAC58     <---------ANAC58
                                     --------->ANAC58       <---------ANAC58     <---------ANAC55(1)
  --------->TOE1(2)                  --------->ANAC55(2)    ----------->GT1      <---------ANAC55(2)
=====================================MADS_MADS          <-------TEIL             <---------ANAC58
------ZmHOX2a(1)   ----------------->AGL3               <---------ZAT14          <---------ANAC46 --
=====================================MADS_MADS         --------->ALFIN1   ------------>CBF        <-
->ZmHOX2a(1)       <-------TEIL      <---------ANAC55(2)--------->ZAT14  ----------->RAV1(1)  <-----
 
aaggaccagcgagcgagagagattcaaaaatagaaatttcacgtaaagagaattagaggtgcagcgtgaaaagaggcaacaattccgtgcataccaaggt  4355100
                                                                                                  --
                                                                                                <---
                                                                                              <-----
                                                                                             -------
                                                                                             <------
                                                                                          --------->YAB1
                                                                                       <---------ICU4
                                                                                       --------->YAB1
                                                                                      <---------AHL20(2)
              <---------ANAC55(2)                                                     --------->ICU4
  <---------At4g35610                       *TSS                                      --------->AHL20(2)
  --------->At4g35610                <---------GLK1(2)                                <---------ATHB51
  ----------->RAV1(2)                <---------ARR14(2)                             --------->YAB1<-
<---------ALFIN1                     --------->ARR14(2)                           --------->AHL20(2)
---->ZmHOX2a(1)       --------->ANAC46 <-------TEIL                      <----------DOF2  <---------AHL20(2)
----------HVH21     <-----------GT1  --------->ARR11(1)                 <---------ANAC58  --------->AHL20(2)
----ARR11(3)  --------->ANAC55(2)---------->DOF2                        <---------ANAC58 <---------YAB1
 
ccttcacctgcataaataggtattcacaacatcaccaaaagattcgtcaagagcaagagaacatagtttcttcttgcttttgagaaaaaataattatata  4355200
                                                                        xxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                                                        <------MYB46(1)           <-
                                                                        <------MYB83      <---------ANAC58
        ---------->DOF2         --------->AHL20(2)                    <--------P        <------MYB83
       <------ZmHOX2a(1)   --------->YAB1                           <---------MYB46(3)  <------MYB46(1)
--------->AHL20(2)      --------->YAB1                              --------->MYB55(2) <---------AtMYB61
------->AHL20(2)      <---------YAB1--------->AHL20(2)              <------MYB83 <---------DEAR3(1)
------AHL20(2)     --------->AHL20(2)                               <------MYB46(1)   <--------P ---
----AHL20(2)       <---------AHL20(2)                     ---------->DOF2     ----------->HVH21  ---
-->AHL20(1)        <---------AHL20(1)             ---------->DOF2  --------->ALFIN1 --------->ALFIN1
---AHL20(1) ----------->GT1--------->AHL20(2)--------->At4g35610   <---------AtMYB61<-----------RAV1(1)
--------AHL20(2)   --------->AHL20(1)  ---------->DOF2  --------->ARR11(3) <----------DOF2<---------ANAC58
 
tttttatataggaaagggttaatttattaataaaaaaaaataaaaagaagcagaaaagagataatgcagggtggtaggcttttgacggtgttggtgtgcc  4355300
                                                                            <------NtERF2
                                                                           ------>NtERF2
                                                                          <---------ALFIN1
                                                                          --------->ANAC58
                                                                         --------->LBD16
                                                                        --------->DEAR3(1)
                                                                        <---------ALFIN1
                                                                     ------->GAMYB
                                                                     --------->DEAR3(1)
                                                                    <------------AtMYB77
                                                                    --------->MYB46(3)
                                                      --------->ANAC58  <---------ATERF1(1)
                         --------->LBD16              <---------ANAC55(2)<------NtERF2
                         <---------ATERF1(1)          --------->ANAC55(2)------>NtERF2
               <---------MYB46(3)                --------->ALFIN1   --------->DEAR3(2)
               <------MYB46(1)                  <-------MYC4        <---------ABI4(2)
            <-------GAMYB<---------DEAR3(2)     <-------PIF5        --------->ATERF1(1)
            =============================================MYC_MYB   <---------ATERF1(1)
           <---------ANAC58                     <-------MYC3      --------->ARR14(2)
           <---------ANAC58                     ------->MYC4      <---------ARR14(2)
           <---------ANAC46----------->HVH21    ------->PIF5   --------->ANAC55(2)
          <------NtERF2  --------->At4g35610    ------->MYC2   --------->ANAC46
         ------>NtERF2   <---------At4g35610    ------->MYC3   --------->ANAC58
        <---------DEAR3(1) --------->WRKY12     <-------MYC2  ------>MYB83--------->ANAC58
        --------->ALFIN1--------->DEAR3(1)     --------->ANAC46--------->ANAC58
     <---------DEAR3(1) <---------DEAR3(1)     ==============================MYC_MYB
     --------->ANAC46  <------NtERF2           ==================================MYC_MYB      <-----
   <---------ALFIN1    <---------LBD16         <---------TGA1a------>MYB46(1)            --------->TOE2(3)
  <---------REM1(2) --------->At4g35610        --------->TGA1a<---------LBD16           ------------
 ------>NtERF2 <------MYB83--------->WRKY38(1) <---------O2  --------->MYB52(1)      --------->GLK1(1)
--------ATERF1(1)   <---------At4g35610        --------->O2 --------->TOE2(2)        <---------GLK1(1)
------>ANAC58 <---------AtMYB61           --------->ANAC46  --------->TOE1(2)   <---------LBD16 ----
------>ANAC58 <---------DEAR3(1) <---------MYB52(1)   --------->ANAC58 --------->ATERF1(1)------>ZmHOX2a(1)
 
tcgcctccacggtggcgttggtgagcgccggtgacccttacttctactacacgtggaacgtaacctacggaaccgccgcgcctctcggaattcctcaaca  4355400
                                                            <-----------TGA1
                                                           --------->ETT(2)
                                                           <---------TGA2(1)
                     ----------->RAV1(2)                   --------->TGA2(1)
                     <---------ANAC46       ------->GAMYB  --------->bZIP60(1)
            ----------->HVH21         --------->ANAC46     <---------bZIP60(1)   --------->TOE2(3)
            ------->GAMYB        <---------MYB59           <---------ETT(2)    -------->P
         --------->MYB52(1) <---------MYB59--------->MYB46(3)   <---------YAB1------->GAMYB<--------
------RAV1(2)------------>AtMYB77--------->TOE1(3)        <-----------STF1   <---------MYB111(2)
----->AGL1--------->At4g35610    --------->TOE2(3)--------->MYB46(3)         --------->MYB46(3)  ---
------->GT1--------->MYB46(3)------>ZmHOX2a(1)  ----------->RAV1(1)  <---------ARR11(3)  ------->TEIL
 
ggtgattctcatcaacggacagttccctggtcctaacctaaactcaacctccaacaacaatgtcgtcatcaatgtcttcaacaacctcgacgagcctttc  4355500
             <-----------GT1                                     --------->ANAC55(2)
          ----------->GT1                        <-----------HVH21             <-----------GT1
 <---------WRKY18(1)                        --------->ARR11(3)   <---------ANAC46     <---------YAB1
----------->HVH21 --------->GLK1(2)    <-----------HVH21         <---------ANAC58    --------->AHL20(2)
-DAG2   <---------ANAC46               <-----------TGA1          <---------ANAC58 --------->TOE2(3)
--->ZmHOX2a(1) <---------MYB52(2)  <----------DOF2  --------->WOX13(1)<---------YAB1 <---------AHL20(2)
 
ctcttgacctggtttgtaactaatctgtaaacttattcctttcgtcagaacttgtcattcaattgttttcgtgatttttgttttacattaaaattgttgt  4355600
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AGI:  At3g13400.1   
Description:  SKS13 (SKU5 Similar 13); copper ion binding / oxidoreductase. similar to SKS12 (SKU5 Similar 12), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT1G55570.1); similar to SKS14 (SKU5 Similar 14), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT1G55560.1); similar to SKS11 (SKU5 Similar 11), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT3G13390.1); similar to Bplo [Brassica napus] (GB:CAA47177.1); similar to L-ascorbate oxidase homolog precursor (GB:Q00624); similar to Bplo [Brassica napus] (GB:CAA47178.1); contains InterPro domain Multicopper oxidase, type 3; (InterPro:IPR011707); conta
Range:  from: 4355145    to: 4357435    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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