Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                         --------->ANAC58                                                                       --------->ANAC58                                                                    ------>ZmHOX2a(1)                                                                   --------->TOE2(3)                                                             <---------ALFIN1            <---------REM1(2)                             <---------ARR14(2) ------->ZAT2                                             --------->ARR14(2)                    <<<<< ------->At4g35610       --------->ANAC46         --------->ANAC46 --------->TOE1(3)       <---------   tagcagaccatttcttcacaggcttcgactcaactcttaaactcttggctctacgaagcgcatccacttccttaagcaaatcaaattcgatacctttctt  4094600                                                                                                 ----                                                                                                -----                                                                                               ------                          --------->ZAT2                                                    <--------                          --------->At4g35610                                               <--------                        --------->MYB46(3)                                                 <---------ANAC58                      ----------->RAV1(1)                                                  <---------ANAC58                      --------->MYB52(1)                                                <-----------GT1                   --------->ANAC58                                                  <---------------AtSPL3                   --------->ANAC58                                                <---------ARR14(2)                   --------->ANAC55(1)                                             <---------GLK1(2)                   --------->ANAC46                                                --------->ARR14(2)                   --------->ANAC55(2)                                  --------->ARR14(2)<---------- <<<<TBF1          <---------ANAC55(2) <----------DOF2--------->MYB46(3)<---------ARR14(2)----------- -DOF2     <---------ALFIN1<---------GLK1(2)          <---------MYB111(2)    --------->ANAC46 -------   cttcaactcttcaacacatttacgcaacagcttcgcatcttctttctccctctccaacaacttctcaagatgcgattccacttcagatttgtaccgtacc  4094700                                                           --------->ANAC46                                                           --------->ANAC58                                                    <----------DOF2    <---------ATHB12                               ==================================HOX2a_HOX2a -->NtERF2                                       --------->ARR11(3)                                -- ---->DEAR3(1)                             <------ZmHOX2a(2)                           <------ZmHOX2a(1) --->DEAR3(2)         --------->At4g35610 --------->ARR14(2)                         <---------TOE2(3) -SPL7                <---------At4g35610 <---------ARR14(2)                     --------->At4g35610 -SPL1(2)    --------->ANAC58       <---------ZAT14------>ZmHOX2a(2)             <---------At4g35610 -----AtSPL3 --------->ANAC58--------->ZAT18     <---------ARR11(3)           <------ZmHOX2a(1)  <--- ---->AtSPL3 --------->ANAC46<---------ZAT14<-------TEIL   --------->ANAC58--------->At4g35610   <--- -->SPL7------>ZmHOX2a(2)    --------->ZAT14------>ZmHOX2a(2)           --------->At4g35610      <---   gcccaaatgatccccaaggaagatagcagagcgcagagtgaagggatccatgatcttttacaagcactggaagaagcagaggaagatgaggatgaagaag  4094800                                                        <---------WOX13(1)                                                   <---------ZAT2                          <---------            --------->At4g35610                    --------->At4g35610                  --------->GLK1(2)        <---------REM1(1)         ---------->DOF2  --------->ZAT2                      <---------GLK1(2) ------->ALFIN1           --------->ALFIN1         <---------At4g35610            ------>ZmHOX2a(2) ------ANAC46           <---------ANAC46          <---------AGP1                <---------AGP1 ------ANAC58           <---------ANAC58     <---------REM1(1)              --------->GLK1(2) ------ANAC58           <---------ANAC58    --------->ARR11(3)             <---------GLK1(2)        -   cgtggaagagaagtagcagagaaatggagtggaagagaaagaagaagatgtagagctgagtgatttctcttcgaacagaatcgatctgagattctttgtg  4094900                                                                  --------->ARR14(2)                                                                  ------->TEIL                                                             <------MYB46(1)                                                          <-------GAMYB                                                         <-----------RAV1(1)                                                       <---------ANAC46                                                       <---------ANAC58                                                       <---------ANAC58                                                   <---------ANAC58        ==================HOX2a_HOX2a                                                  <---------HSFC1(2)       ------>ZmHOX2a(2)                                                  --------->HSFC1(2)      ===================HOX2a_HOX2a                                             =====================================HOX2a_HOX2a                                             ====================================HOX2a_HOX2a                                             <------ZmHOX2a(1)   <---------CCA1(2)                                            --------->LBD16 <---------AtMYB61                                          <---------LBD16--------->ALFIN1 <------ZmHOX2a(2)      <---    --------->ANAC58                      ===========================RAV --------->ARR14(2)<---------ANAC58    --------->ANAC58             --------->MYB46(3)<---------ANAC58 --------->TOE1(2) <------ZmHOX2a(1) -DOF2 <---------ANAC46        <-----------GT1   --------->GLK1(2)<---------ARR14(2)  =============== -------->CCA1(2)          <----------DOF2<-----------RAV1(2)<------MYB83<---------ARR14(2)<---------ANAC58   agagacacggcttagaattagctcttcttcttttaaccattgtttcaggagaagcttgtgtgttggtgtatctgcgatctggtgaagaggatgtcttgtc  4095000                                               <----------DOF2                                   --------->ANAC46                                   --------->ANAC58                       <---------ZAT14       <---------HSFC1(2)                       --------->ZAT14       --------->HSFC1(2)                       --------->ZAT18       <---------HSFB2a(1)                    <---------ANAC58    --------->AtLEC2                    <---------ANAC58------>NtERF2                   <-------TEIL    <---------TGA2(1)                 <---------ARR14(2)--------->bZIP60(1)           ------>ZmHOX2a(2)    ----------->HVH21           <---------DEAR3(1)  ------>ZmHOX2a(2)                                 ----------->GT1        --------->ATHB12      <---------At4g35610    <-------GAMYB            <---------ARR14(2)   ------>NtERF2 --------->ARR14(2)<---------bZIP60(1)                      ----------->ARR10 -------DOF2   <---------MYB46(3)  --------->ANAC58 <---------MYB46(3)   --------->ALFIN1          -- =================HOX2a_HOX2a --------->At4g35610  <---------TOE2(3) <---------ZAT14         --------   tttgcctccatgatcggtggattcgtgctctgatctgacgccatggaagctttgtggttagagagagagagagaagtgtagatttgtgaatcgcagagaa  4095100                                                                    ------->TEIL                                                              <---------AHL20(2)                                                            <---------YAB1                                                           --------->AHL20(2)           <----------DOF2                                 --------->AHL20(1)       --------->LBD16                <----------DOF2    <---------AHL20(2)     <-------TEIL <---------TOE2(3) <----------DOF2      --------->AHL20(1)         ------>ZmHOX2a(1)     <---------LBD16            <------------MYB.PH3(1)  <---------AHL20(1) --------->ARR14(2)   <---   --------->ARR11(1)         --------->MYB52(1)         --------->AHL20(2) <---------GLK1(2)   ----- -------->DOF2<------------CBF<---------DOF5.7(2)     --------->AHL20(2)    <---------ARR14(2) <----- --->GT1------>NtERF2   <----------DOF2             <---------AHL20(2) <-----------GT1       --------   aaaaagatgcggactttattgaggctctttggtaacggctcttttgggttttattttaaaatattatatgaatttacagatttgtcctgagagcgtaacg  4095200                                     <---------ALFIN1                                  ----------->HVH21                                  <------NtERF2                                 <-----------HVH21                                 ------>NtERF2                                --------->bZIP60(2)                                <---------bZIP60(1)                                --------->bZIP60(1)                                --------->O2                                <---------ATERF1(2)                                --------->RRTF1(3)                                --------->RRTF1(2)                                --------->RAP2.3(3)                                --------->ATERF1(2)                                --------->RAP2.3(2)                               --------->RAP2.3(1)                               <------NtERF2                               --------->ATERF1(1)                               --------->RRTF1(1)                               --------->ERF1                              <---------RAP2.3(1)                              <---------ATERF1(1)                --------->ANAC46--------->DEAR3(1)        ------------>CBF      <---------RRTF1(1)           --------->At5g28300      --------->YAB1          ------>NtERF2              --------->ANAC58            --------->AHL20(2)     <---------ATHB12     <---------DEAR3(1)             --------->ANAC46 <---------ARR11(1)   --------->WOX13(1)   <---------ANAC58        <---------At4g35610       --------->ARR11(3) ------------>CBF       <---------ANAC58   --------->YAB1--------->ANAC58 --------->ARR14(2)      --- --------HVH21<-----------GT1<---------DEAR3(1) --------->At4g35610       <---------ARR11(3)     ---- -->GAMYB    <---------ARR14(2)--------->DEAR4(2)      --------->MYB52(1) <-----------ARR10    ------ -------MYB.PH3(1)   <---------DEAR3(1)   <-------TEIL <---------ALFIN1   <---------ARR14(2) -------- ->MYB52(1)  --------->ARR14(2)--------->ORA47(2)   --------->PCF2       <---------CCA1(2)   --------   gtcatcaatcaacaatatacggctcggcttggcgccgtcacacattcgtaaactgccccacggtattttaggcccatatctggcccattaaaaacaagaa  4095300                                                                                    <---------DOF5.7(2)                                                                                  <---------MYB52(1)        --------->TOE1(3)                                                         --------->DOF5.7(2)        --------->TOE2(3)                                                        --------->TOE2(3)        <---------DAG2                                                           --------->TOE1(3)     <-----------GT1    ----------->GT1          --------->ANAC58        <-----------GT1 -------->GT1       --------->HSFB2a(2)          --------->ANAC55(2)    --------->AHL20(2) ----->DAG2         <---------HSFB2a(2)          <---------ANAC55(2)--------->AHL20(2)          ----- ---->DOF2       <----------DOF2                 --------->ANAC58 --------->ANAC55(2)<---------TOE2(3) ->ANAC58       <---------DAG2                   --------->ANAC46 <---------ANAC55(2)<---------TOE1(3) ->ANAC58    <-----------GT1         <------ZmHOX2a(1)<---------YAB1<---------AHL20(2)        <------   aggtaattaaccttatcacctttgggaagaaaatagtgaggaagaccactcacgttatatttgtgcttaagtaattaacttatcgttaatgttgaaacta  4095400                                                                                    --------->ANAC55(2)           --------->ANAC46                                                        <-------TEIL           --------->bZIP60(2)                                           --------->HSFB2a(1)          <-------MYC3                                                   --------->ANAC58          ------->MYC3                        --------->HSFB2a(2)        ----------->GT1       <---------ALFIN1           --------->MYB46(3)   <-------TEIL      --------->ANAC58 ---->MYB52(1)         <-------TEIL       <-----------TBP               ------->TEIL<---------ANAC55(2) ---MYB52(2)<-----------HVH21    -------->P   <---------HSFB2a(2)       --------->SPL7   acgcttgaaccacatgtcaccaatatacatactgcaaccagtggatttatagaaaaatacattttctatttccgaacgttacaaattcgtaactcttctt  4095500  Previous    Next  AGI:  At3g12870.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G56120.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47924.1) Range:  from: 4094424    to: 4095044    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version