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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                     --------->ANAC46
                                                                                --------->WOX13(1)
                                       --------->DEAR3(1)                     <---------ATHB12
                                    --------->ANAC46                        --------->WOX13(1)  ----
                            --------->ZAT14                               <---------ATHB12      ----
                            <---------ZAT18 ---------->DOF2           <---------ATHB12  ----------->RAV1(1)
            --------->ANAC58--------->ZAT18--------->AtMYB61        --------->WOX13(1) --------->ANAC46
-----DOF2   --------->ANAC58<-------TEIL------>NtERF2 --------->MYB46(3)--------->WOX13(1)     -----
 
tcgccttcacaactctcgcaaactcaagaagtgcattctacgacgaccaaagacagaacaaaccaaaaaatcaatcaatcaatcaatcccacaacatgaa  3961500
                                        <--------P
                                   <---------At4g35610
                                   --------->At4g35610
                                --------->ARR14(1)
                                --------->CCA1(2)
                               <---------ARR14(3)
                               <---------ARR14(2)
                               --------->ARR11(3)
                               --------->ARR14(2)
                               <---------ARR11(3)                      --------->LBD16
                               --------->ARR14(3)                    <---------LBD16
                               <---------AGP1                     <---------HSFC1(2)
                               --------->AGP1                     <---------HSFB2a(1)
----->ANAC58      <-----------GT1------>ZmHOX2a(2)                --------->HSFC1(2)            <---
----->ANAC58  --------->YAB1 ----------->ARR10         <------ZmHOX2a(2)                        ----
-->TEIL       --------->AHL20(2)<------ZmHOX2a(2)     --------->ARR11(3)                       <----
 
cgcatttcatcaccgaataatatacactctctaagatctgctggtaactgaaattgagatcaatagagaaactccggacaaaattagtctaatcgtgttc  3961600
         <---------YAB1                      ----------->GT1                        <---------ANAC58
<------ZmHOX2a(2)                          ----------->GT1                 --------->ARR14(2)
------HSFB2a(2)                           <-----------------------TaNAC69(2)        <---------ANAC58
----->HSFB2a(2)                     <---------TGA1a                   --------->CCA1(2)
-----LBD16--------->YAB1            <---------O2               <---------YAB1    <----------DOF2  --
 
tggatcaagactataatagcataaaacacacatatcgagacgagagatgtgaaaaaatcgaagatgatgagagatttggaacctctttcttgttgtgttc  3961700
                                                                          --------->ANAC58
                                       <---------YAB1                     --------->ANAC58
                                   --------->ZAT14                  ------>NtERF2           --------
          --------->TOE1(2)        <---------ZAT14              --------->DEAR3(1)          <-------
   --------->At4g35610         <---------ALFIN1              <---------ALFIN1             --------->HSFB2a(2)
   <---------------------WRI1 --------->MYB46(3)           ------>NtERF2---------->DOF2   <---------HSFB2a(2)
------->ETT(2)            --------->AtMYB61                ----------->RAV1(1) <---------CCA1(2) ---
 
atcgacagcgaaacgagcgaggctctcaacctcaccactgttctgattagcagggacatcgccaacacctccgactaaagccatctcttcgttgcagaag  3961800
                                                                                                  <-
                                                                                                  <-
                                                                                                  <-
                                                                                                  <-
                                                                                                 <--
                                                                                                 ---
                                                                           <---------YAB1        ---
                                                               --------->MYB52(1)     <----------DOF2
                                                            --------->ANAC58         --------->TOE2(3)
                                                            --------->ANAC58<---------ICU4       <--
->At4g35610 <------ZmHOX2a(2)                           ----------->GT1    <---------ATHB12  <------MYB83
--At4g35610 ===============HOX2a_HOX2a             <---------ATHB12      --------->YAB1      <------MYB46(1)
------>TOE2(3)      <------ZmHOX2a(1) <---------------------WRI1    <---------GLK1(2)<--------------
 
cctaaatcactggcgatcagagaggaaatgaagagggatagagagaagaaaacaatgaagagtaagaaacggcttctcatcattctcacctttatttggt  3961900
   <---------ANAC46
 --------->ABI4(2)
 <---------ZAT18
 --------->ZAT18                                                                     <---------TOE1(3)
 ------>NtERF2                                                                 --------->LBD16
--------ANAC58                                                <---------MYB52(1)     <---------TOE2(3)
-----MYB46(1)                <-----------GT1                <---------ZAT6   <---------LBD16
--------ANAC58         ---------->ID1                       ----------->GT1 --------->MYB52(1)
-----MYB83       *TSS <-----------GT1                     <---------ZAT14   ------->TEIL
-------DEAR3(1)  <---------RVE1(1)                        --------->ZAT14 <---------ZAT14
------>MYB46(2)  <---------CCA1(1)                 <-----------GT1        --------->REM1(2)       <<
------>MYB52(2) <---------ARR11(3)                <-----------GT1         --------->ZAT14        <--
-------MYB46(3) --------->ARR11(3)               <---------AHL20(2)    <---------ANAC46          <--
---AGL3        <<<<<<<<<RAP2.2         <------------CBF------>ZmHOX2a(1) --------->ALFIN1     <-----
 
tcggtgccctgtatttttagatatttttcgttttactcgtcgaattgttgattttatcctctacagttaattcgccgtgtaccggattaaggtgtccatt  3962000
        <------MYB46(1)
        <------MYB83                                        <---------TOE1(2)
        <---------MYB46(3)                                 <-----------GT1
    <-----------RAV1(1)                             <---------ARR11(3)
   <---------TOE2(3)                                <---------AHL20(1)
<<<<<<<<MYB80    <------MYB83<---------TOE2(3)      --------->AHL20(1)                   --------->ATHB12
----MYB46(1)     <------MYB46(1)                    --------->ARR11(3)                  <---------YAB1
----MYB83       <---------------AtSPL8          --------->YAB1               <---------TOE2(3)
----MYB52(1) <-----------RAV1(1)               <---------YAB1<---------YAB1---------->DOF2 <--------
 
tggtttgatgttggttttgttggtacagttttaagtttaggctctgatttatgaaaatattcttacgatttaaaacaaaaaaggtttacatttgattgga  3962100
                                                                                    ------>MYB46(1)
                                                                                    ------>MYB83
                                                                                 --------->MYB46(3)
                                                                             <---------At4g35610
                                                                 <------NtERF2  -------->P<---------AHL20(2)
                                                   <------MYB83----------------->AGL1     --------->AHL20(2)
                           <---------------AtSPL3  <------MYB46(1)           --------->At4g35610
                        ---------->DOF2        --------->ATHB12<-----------------AG----------->RAV1(1)
             <--------HAHB4<---------------AtSPL8<---------WOX13(1)         --------->ANAC58
             --------->ATHB12      <---------ARR14(2)         ---------->ID1--------->ANAC58
-WOX13(1)   <---------ATHB12       --------->ARR14(2)   --------->ATHB12 <---------MYB52(1)
 
tgccaattgaatcgaatcatttgtaagaaaagagtaccgattcgagttatagattggtttgatttggcctcaatcggttaagctaccaacattttaaata  3962200
                                                                       <------NtERF2
                                                                    <------NtERF2
                                                                  --------->ATERF1(2)
                                                                  --------->ETT(2)
                                                                  <---------At1g77200
                                                                  <---------ATERF1(2)
                                                                  --------->ETT(1)
                                                                <-----------HVH21
                                                             <---------TGA1a
                                                             =======================================
                                                             <---------ANAC55(2)
                                                             --------->ANAC55(2)
                                                 --------->bZIP60(2)--------->At4g35610
                                                 --------->ANAC58 <---------RAP2.6(2)
                                                 ----------->GT1--------->REM1(2)
                                                 --------->ANAC55(2)<---------At4g35610
                                                 --------->ANAC58--------->RAP2.6(3)
                                               <---------ALFIN1--------->ALFIN1
                                              <------NtERF2  --------->O2
                                           --------->RAP2.6(3)<-------MYC3
         ------>MYB83                      --------->At4g35610------->MYC3
         --------->GLK1(2)              <---------ARR14(2)   <---------O2
         ------>MYB46(1)               <------ZmHOX2a(1)     <---------ANAC58
         <---------ARR14(2)          <---------TOE2(3)       <---------ANAC58
         --------->ARR14(2)       <---------ANAC46      --------->ANAC58
        --------->WOX13(1)       <---------At4g35610    --------->ANAC46                         <--
 <-------TEIL                    --------->At4g35610    --------->ANAC58 <-----------HVH21   <------
 
gaaattcataccaatctggattacacatgaaaacgttgctgaggatagcggcacgttatacgaaacgtgtcggcagagtcacacagaaattgtcaaacac  3962300
 <---------ANAC58                                                     --------->YAB1
 <---------ANAC46                                                     --------->AHL20(2)
 <---------ANAC58                                                    <---------ATHB12
========bZIP_DOF                 <----------DOF2    <---------At4g35610                            -
--------DOF2                    <---------DAG2      --------->At4g35610   ---------->DOF2  ---------
---ALFIN1                     ------->TEIL <----------DOF2     --------->ZAT18             <--------
 
ctttacttgtaatcgaagtttaaaacatctatgcacctttcttcgtctttctctcatctgctagagagcccaattaaaaaaggcccatgggaaataaaat  3962400
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AGI:  At3g12490.1   
Description:  cysteine protease inhibitor, putative / cystatin, putative. Identical to Cysteine proteinase inhibitor 6 precursor (CYS6) [Arabidopsis Thaliana] (GB:Q8H0X6;GB:Q8VZA2;GB:Q9FUB0;GB:Q9LHF9); similar to cysteine protease inhibitor, putative / cystatin, putative [Arabidopsis thaliana] (TAIR:AT5G05110.1); similar to cysteine proteinase inhibitor [Brassica rapa] (GB:ABK78689.1); contains InterPro domain Proteinase inhibitor I25, cystatin; (InterPro:IPR000010); contains InterPro domain Proteinase inhibitor I25A and I25B, type 2 and phytocystatins; (InterPro:IPR003243)
Range:  from: 3960408    to: 3961918    Orientation: Reverse
Links:  TAIR  MIPS 
 
AGI:  At3g12500.1   
Description:  ATHCHIB (BASIC CHITINASE); chitinase. Identical to Basic endochitinase B precursor (CHI-B) [Arabidopsis Thaliana] (GB:P19171;GB:Q9S7J5;GB:Q9S838;GB:Q9SXJ2;GB:Q9SXJ3;GB:Q9SXJ4); similar to chitinase, putative [Arabidopsis thaliana] (TAIR:AT4G01700.1); similar to class I chitinase [Arabis fecunda] (GB:AAF69777.1); contains InterPro domain Endochitinase (InterPro:IPR016283); contains InterPro domain Glycoside hydrolase, family 19, catalytic; (InterPro:IPR000726); contains InterPro domain Chitin-binding, type 1; (InterPro:IPR001002)
Range:  from: 3962389    to: 3963971    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
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