Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             --------->CCA1(2)                          --------->AHL20(1)                          <---------AHL20(1)                       --------->AHL20(2)                      --------->AHL20(2)                    --------->ANAC55(1)                        <---------AHL20(2)       --------->MYB52(2)   <---------YAB1   --------->ANAC55(2)                <---------ATHB12             <---------At4g35610 ---YAB1            <---------ANAC55(2)                --------->ICU4           <---------REM1(1) >ID1               --------->ANAC46                 <---------ICU4 <----------DOF2------->TEIL------   tagttttgatagaagttagaacacataatatataagaacaattgtctagagagactaatgactaattaaactttgatttatcatgtagcttagttacaaa  3732300                 ----------->GT1                --------->DAG2                       --------->AtMYB61          <---------------AGL15                    ------>NtERF2          --------------->AGL15                    <---------ATERF1(1)                             --         <---------ANAC58             ------>ZmHOX2a(1)                                 ------>MYB83         <---------ANAC58  <----------DOF2 ---------->DOF2                              ------>MYB46(1)    <---------ICU4         ------>ZmHOX2a(1) ---------->DOF2                       <-----------GT1 <- --->ANAC46    ---------->DOF2   <---------GLK1(1)<---------ALFIN1 ------>ZmHOX2a(1)  <---------MYB59   caacaagtattgcttcaaaaagtataatccttttgagttcctcccaaaagagccacctccattgccatcctttccacattagagtttaccaaattctaaa  3732400            ----------->GT1             --------->ANAC58          ----------->GT1               --------->ANAC58                                ---------->DOF2         --------->DAG2               ---------->DOF2                                --------->AHL20(2)        ---------->DOF2      --------->CCA1(2)      --------->ANAC55(2)             --------->AHL20(2) ------->MYB52(1)          --------->AHL20(2)     <-----------GT1           <-----------GT1 ----------GT1         --------->MYB46(3)      <---------ICU4             <---------AHL20(2)   ttaacagagcaaaagtgaaaaatcaacaaatatatgcgtcgaaagccaatttttacataattttgtgtctgcataatttaactccattaaaaaagcatgg  3732500                     <---------YAB1                   -------->HAHB4                   --------->YAB1                   <---------ICU4                  --------->ICU4                                                          --------->ARR14(2)                  <---------ATHB51                                                        <---------ARR14(2)               <---------AHL20(2)                                                         <---------SPL7               --------->AHL20(2)                                                         <----------              <---------AHL20(2)                                                         <---------DEAR3(2)              --------->AHL20(2)                                                       --------->SPL7              <---------AHL20(1)                         <---------ANAC58           --------->DEAR3(1)           --------->AHL20(1)                   ---------->DOF2                     ------->GAMYB           --------->AHL20(2)           <---------HSFB2a(2)                        --------->DEAR3(2)           <---------AHL20(2)       <---------PCF2       <---------ANAC46<-----------GT1<---------MYB46(3)          --------->AHL20(2)        <---------ANAC46     <---------ANAC58--------->MYB52(1)          <---------AHL20(2)     --------->ALFIN1       ------>NtERF2  --------->ICU4<---------SPL7      --------->AHL20(2) <----------DOF2--------->HSFB2a(2) <----------DOF2        --------->MYB46(3)   agaaacttttaaataatttaattatgactttctaagtggggtccagaccataaaacgctgcgttttaagtgaaattatcggttcaaccggccggtccggt  3732600                                                    --------->TOE2(3)                                              <---------MYB59                                       ------->GAMYB--------->TOE1(3)                                    --------->MYB52(1)             *TSS                           ------>ZmHOX2a(1)<---------ARR11(3)   <---------ALFIN1              <---------ARR14(2)    ----------->RAV1(1)        <---------ALFIN1                  <---            --------->ETT(2)       --------->MYB46(3)         --------->ANAC46   --------->At4g35610 -HVH21     <---------ETT(2) ----------->TBP--------->ARR11(3)<---------ALFIN1   <---------At4g35610   tctaagaacatcggtcgatctagttgctcctatatgaacaacagaagacctaaaccctaactccccccctctctctctctctctgctccatttctctcac  3732700                             ------->TEIL                          --------->ANAC58                          --------->ANAC58                          --------->ANAC46                          <---------ANAC55(2)                          --------->ANAC55(1)                          --------->ANAC55(2)                      <-----------HVH21                      <-----------TGA1                                  <----------DOF2                     --------->ANAC46               <--------P       <---------ALFIN1                <---------ARR11(3)             --------->YAB1      --------->ANAC46 -------DOF2    --------->ARR11(3)        <------NtERF2         <---------REM1(2)   tttcttcacatctctgaagctcttcgtcacgcatctacaatggcatcgatgatggtaagtcgcatctacacacactttctctctctatctcactctctgt  3732800                                                         <------ZmHOX2a(2)                                                        <---------ARR11(3)                                                        --------->ARR11(3)                                                       <---------At4g35610                        <----------DOF2             --------->LBD16             ======================bZIP_DOF        ------->GAMYB             <---------ANAC58                  --------->MYB46(3)             <---------ANAC58                 --------->At4g35610             <---------TGA1a                  <---------At4g35610             --------->TGA1a               --------->At4g35610  <---------At4g35610             =============================================MYC_MYB             ==============================================MYC_MYB           --------->MYB52(1)     <<<<<<<<<<MYB80 --------->MYB46(3)       ----------->HVH21       --         <---------MYB52(2)     <---------AtMYB61-------->P     --------->At4g35610            ------   gctataaactgactaacgtgccactactttggttttggtttgatgagcagcaaccgcagatcatactgctgaaggaagggacggacacatctcagggcaa  3732900                                  <-------GAMYB                    <---------TGA1a                               <---------At4g35610                 --------->TGA1a                               <---------ZAT14                     <---------O2                --------->TOE2(3) ===========================================MYC_MYB             ----------->RAV1(1) <---------MYB46(3)                ==================================            <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)          --------->ANAC58          --------->ANAC46     --------->ZAT14          --------->ANAC58          --------->ANAC58--------->ZAT18             <---------ALFIN1                             <- ------->ANAC46--------->REM1(1) <-----------RAV1(1) --------->MYB46(3)                          ---- ---->DOF2--------->ANAC58<---------ZAT14 <---------REM1(1)        --------->O2           --------->ANAC46   agcgcaactagtaagcaacatcaacgcttgcactgctgttggagatgtagttcgaaccacgctcgggccacgagggatggacaaactcattcacgacgat  3733000                                                                            ------>ZmHOX2a(1)                                                                          ------>ZmHOX2a(2)                                                                         <------ZmHOX2a(2)                                                                        --------->ARR11(3)                                                                        <---------ARR14(2)                                                                        <---------ARR11(3)                                                                        <---------GLK1(2)      <-----------HVH21                                                 --------->ARR14(2)      <-----------TGA1                                                  <---------ARR14(3)     --------->ANAC46                                                   --------->ARR14(3)     <---------ANAC55(2)                                              ----------->ARR10     --------->ANAC55(2)                                          <---------At4g35610    ------>ZmHOX2a(2)                          --------->ANAC46   --------->At4g35610   <------ZmHOX2a(2)                          ===================================HOX2a_HOX2a  --------->GLK1(2)                           ------>ZmHOX2a(1)<---------At4g35610  --------->ARR14(2)                     <---------At4g35610   <---------ZAT2  <---------ARR14(2)               <---------ICU4             ===================HOX2a_HOX2a <------ZmHOX2a(1)                 --------->YAB1             ==================HOX2a_HOX2a =======bZIP_DOF                  --------->ICU4              ------>ZmHOX2a(1) --------TOE2(3)                --------->YAB1==================================HOX2a_HOX2a <-------- ------>DOF2       <---------TOE2(3)    ------->TEIL        ----------->RAV1(2)             ---------   aaaggatccgtcaccatttctaacgatggtgctaccatcatgaagctcctcgacattgttcatcctgctgctaagatcctcgtcgatatcgccaaatccc  3733100        --------->ARR11(3)        <---------ARR11(3)     <---------AHL20(2)                        --------->ARR11(3)     --------->LBD16       <---------AHL20(2)                            <---------ARR11(3)    <---------TOE1(1)<-----------GT1    <---------ARR14(2)     --------->ATHB12 -ARR14(2)       <---------AHL20(2)     --------->ARR14(2)    <---------YAB1    <---------At4g35610 >ARR14(2) <----------DOF2 --------->AHL20(2)               --------->YAB1 ------>ZmHOX2a(2)---------   aagactccgaggtctttgttttatttcaattttttaattcccaatctgagttttcgaaaaaatcgtaattggactgatcttgagctaattagcgattcca  3733200  Previous    Next  AGI:  At3g11830.1    Description:  chaperonin, putative. similar to ATTCP-1 (Arabidopsis thaliana T-complex protein 1 alpha subunit), ATP binding / protein binding / unfolded protein binding [Arabidopsis thaliana] (TAIR:AT3G20050.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN70107.1); similar to hypothetical protein OsI_023386 [Oryza sativa (indica cultivar-group)] (GB:EAZ02154.1); similar to putative t-complex protein 1 theta chain [Oryza sativa (japonica cultivar-group)] (GB:BAD45605.1); contains InterPro domain Chaperonin Cpn60; (InterPro:IPR001844); contains InterPro domain Chaperonin TCP-1, conserved site; (InterPro:IPR002194); contains InterPro domain Chape Range:  from: 3732667    to: 3736380    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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