Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           ----------->TGA1                         ----------->HVH21                         <---------MYB52(1)                       --------->ANAC46                       --------->O2                       --------->ANAC55(2)                       =====================================bZIP_DOF                       <---------O2  --------->CCA1(2)           --------->At4g35610      <---------ARR14(2)           <---------ATERF1(1)   <---------TOE1(3)          --------->RAP2.6(2)    <---------TOE2(3)        <---------At4g35610 <---------bZIP60(2)        --------->At4g35610 <---------ANAC46     <---------At4g35610--------->LBD16     --------->At4g35610<-----------HVH21                               --------->AHL20(2)         --  ---------->DOF2      <---------TGA1a                                  --------->ICU4             --  ===============================bZIP_DOF      <---------ATHB12       --------->ARR14(2)        <---- <---------MYB52(1)    --------->TGA1a <---------YAB1                 <---------ARR14(2)        ----- -------GAMYB       ------>NtERF2<---------ANAC46---------->DOF2    --------->LBD16             <---- ---->ANAC46       <---------ALFIN1<------ZmHOX2a(1)              <---------LBD16               <---- ---DOF5.7(2)     --------->MYB46(3)--------->ARR14(2)          <-----------GT1 --------->MYB46(3) --   gccgttaagcagccgcttcccccacccgtgacgttgaggatatgatcaaatcaaagaattcaatataaaccggatttattaaaccacggttcaattagtc  3718000                                                                                                 ----                                                                                                <----                         --------->MYB52(2)      <----------DOF2                               <-----                        <-------TEIL         <---------ZAT18                      ------>ZmHOX2a(2)                     <---------MYB46(3) --------->MYB46(3)                       --------->CCA1(2)                     <------MYB46(1)   <---------At4g35610                       <------ZmHOX2a(2) ------->ANAC58      <------MYB83     --------->ANAC58                          <---------ARR11(3) ------->ANAC58     --------->MYB59   --------->ANAC58                          --------->AGP1 ------ -----ZAT18         <---------AtMYB61--------->SPL7                             <---------AGP1 <----- ---->ZAT18   <---------LBD16      <-----------HVH21                            --------->ARR11(3) -----WRKY38(1)   <---------MYB52(1)<---------MYB52(1)                          <---------ARR14(2) -----WRKY45--------->ANAC46       <-----------TGA1           ---------->DOF2   --------->ARR14(2)<-- ------->ANAC46 <---------DEAR3(2)--------->ANAC46     --------->TOE2(3)      ----------->ARR10------   cacgcattggtttaacgccggtttggttcgttctatccgtcagccactgggctctatcgttagagaaagagagagagggacagatctgtgaagttgggat  3718100                                                                                                   --                                                                                                   --                                                                                                -----                                                                                                <----                                                                                               <-----                                                                                               <-----          <----------DOF2                                        <---------ALFIN1             -------       <-----------GT1                       <---------ANAC58 --------->ANAC46                -------  <----------DOF2                            <---------ANAC58 --------->ANAC58                <------ -->ZmHOX2a(2)                       --------->ANAC58         --------->ANAC58                <------ --ZmHOX2a(2)                        --------->ANAC46        <---------ZAT18                  ------- ----ARR14(2)                      <---------ALFIN1          --------->ZAT18                  ======= --->ARR11(3)                     <---------REM1(2)   <---------ANAC46                        ======= ----ARR11(3)                   <---------ETT(2)    <---------ANAC46       --------->ZAT6     ======= --------DOF2                   --------->ETT(2) <-----------RAV1(1)================================= --->ARR14(2)     <---------MYB52(1) --------->ANAC58 <---------YAB1<----------DOF2           -------   ctttctttttcactttcttcgttgtctctctctgtctacacgcttgtgcttgtgttgtgtttgtgcgccactttctatctctactgttttcttctctcgt  3718200   <----------DOF2 ------->ANAC58 ------->ANAC58 ------>HVH21 -----REM1(2) ------TGA1 ------HVH21 -->bZIP60(1) -->O2 ---O2  <----------DOF2                                                                        ------ ---TGA1a                                                                                   --------- -->TGA1a                                                                                   --------- ============================bZIP_DOF                    <----------DOF2        ------>ZmHOX2a(2) =============bZIP_DOF --------->At4g35610              <---------ANAC58      --------->ARR11(3) ==================bZIP_DOF  <---------At4g35610        <---------ANAC58<---------DAG2      --------- ===bZIP_DOF           <---------At4g35610        <---------YAB1        <----------DOF2    --------->LBD16 -->ANAC46        <----------DOF2            ----------->GT1         <-----------GT1 <----------DOF2   cacggcttaacttttgcaatcttttagctgaagctaatttcaacaagttgttatttttgctttcaattttcttactttttgatctctcttttccacgaaa  3718300                                          <<<<<<<<<<<<<AGL25                                          --------------->AGL15                                          <---------------AGL15     --------->YAB1                      <-----------------AGL2    <---------YAB1                       <-----------------AGL1  --------->YAB1                         ----------------->AGL3 --->ARR14(2)                            <-----------------AGL3   --------->TOE2(3) >ANAC58                        --------->ARR11(3)              <---------YAB1                <------ >ANAC46             <---------LBD16  <----------DOF2        <---------YAB1              ---------->DOF2 >ANAC58   <---------GLK1(1)    <---------ARR11(3)   <------------CBF           <------------CBF   cctcttataatagatttctcatttctgggtctaaaatctactttctatttttgggcattgatttttattcttagataaactagattgaaggcaaagaaac  3718400                       --------->GLK1(2)                                  <---------ANAC46                      --------->ARR14(2)                                  <---------ANAC58                      <---------GLK1(2)                                   <---------ANAC55(1)                      *TSS                                                --------->ANAC55(2)                      <---------ARR14(2)                                  <---------ANAC58          <                   <---------HSFB2a(2)                                    <---------ANAC55(2)       <       <------------------------ANAC81                      ---------->DOF2                       <-- <---------AHL20(2)--------->HSFB2a(2)                     ------>ZmHOX2a(1)                 <------- -----GT1       <-----------GT1   <---------GLK1(1) --------->MYB46(3)  <-----------GT1      <-------   catttttttttttttttttttctagattctctctaggtttccctaaatttctcaactactcctaaagagttttgttacgtttctgtgtgattctcctttt  3718500                                                                   --------->RAP2.3(1)                                                                   <------NtERF2                                                                  ------>NtERF2                                                                  <---------ATERF1(1)                                                                  <------NtERF2                                                                 --------->RAP2.6(2)                                                                 <---------DEAR3(1)                                                                 --------->DEAR3(1)                                                                <---------RAP2.6(2)                                                         <------NtERF2                                                         ------>NtERF2                                                        ------>NtERF2   --------->MYB46(2)                                                        --------->RAP2.6(2)                                                       <---------DEAR3(1)              <---------TOE2(1)                                                       <---------ATERF1(2)             <---------TOE1(1)                                                       <---------RAP2.6(2)       <------ZmHOX2a(1)                                         --------->ICU4--------->ATERF1(2)   <---------ANAC46                          <---------ANAC46             <---------ANAC58 --------->MYB111(1)                          <---------ANAC58             <---------ANAC46 --------->MYB52(2)  --------- ---------ANAC58          <---------ANAC58             <---------ANAC58 <---------MYB46(3)  <-------- ---------ANAC58  <---------ANAC58  <---------MYB46(3)--------->ATERF1(1)    <---------TOE1(1) ---------GT1     <---------ANAC58 --------->ALFIN1   --------->RAP2.6(3)    <---------TOE2(1)    <-- --DAG2       <<<<<<<<<CBP60g   <-----------RAV1(1) --------->ALFIN1  <---------MYB52(1)    --------- ---DOF2      <<<<<<<<<SARD1 <---------ARR14(2)   <---------bZIP60(2)<-------GAMYB <---------GLK1(1)   tttcttgacgactccaaatttcgtttttgcgtaaatggtggtgaagatgatgaagtggcggccatggccgccgttagttacgaggaaatacgaggtgaag  3718600                                                                           --------->ATHB12                                                                           <---------MYB46(3)                           ------>ZmHOX2a(2)                              <-------TEIL                          <------ZmHOX2a(2)                              --------->GLK1(2)     --------->REM1(2)   <---------ARR14(2)    --------->LBD16           --------->ARR14(1)    <<<<<<   --------->LBD16       --------->ARR14(2)   <---------ANAC46          <---------GLK1(2)      ------  <---------ANAC58       --------->ARR11(3)  <---------LBD16            <---------ARR14(2)     ------  <---------ANAC46    <------MYB83          ------->TEIL                --------->ARR14(2) --------->DAG2  <---------ANAC55(1) <------MYB46(1)       --------->MYB52(1)         <---------GLK1(1)  ---------->DOF2  <---------ANAC58  --------->ALFIN1     --------->ALFIN1             ----------->ARR10  ============ >ALFIN1            <--------P           <---------REM1(1)         --------->ALFIN1      ------>ZmHOX2a(1) -REM1(1)   <---------ANAC58           <------MYB46(1)         <---------TOE2(3)         ============ --------DOF2      <-------GAMYB       <------MYB83            <---------At5g28300 --------->DAG2 -->HVH21   <---------ANAC58          <---------AtMYB61       --------->MYB52(1) ---------->DOF2<----   ctttccgtgaagaagcttgagggttgggatctggtgagggaaggtgtaccggagaaagatagattaacggtggagattcgttggaaaggtcctaaggcga  3718700                   <------MYB83                   <------MYB46(1)                   <---------DEAR3(2)                  <---------DEAR4(1)                  --------->MYB46(2)                  <---------MYB46(3)                  <---------DEAR3(1)       <----------DOF2      =============================HOX2a_HOX2a      ------>ZmHOX2a(2)     <------ZmHOX2a(2)                                ---------->DOF2     ==============================HOX2a_HOX2a  --------->ALFIN1    <---------ARR11(3)                        <-----------RAV1(1)    --------->ARR11(3)                      <---------At4g35610    <---------ARR14(2)                      --------->ZAT2    --------->ARR14(2)                      <---------ZAT2 <<<<<<<<<<<LFY   <---------DREB2C(2)       --------->At4g35610 >NtERF2  <---------HSFB2a(2)          --------->ANAC58         <---------ANAC58 ----->RAV1(1)   <---------ORA47(1)    --------->ANAC58--------->DAG2 ============HOX2a_HOX2a             <XXXXXXXXXXXXXXXXXXXXMIR396B ===========HOX2a_HOX2a     <------ZmHOX2a(1) --------->ALFIN1  <---------ANAC58 --NtERF2 --------->HSFB2a(2)        <XXXXXXXXXXXXXXXXXXXXMIR396A            --------->At4g35610   cattgggatctttgagaaggtcggtgaagaggaatttcaccaaggaagctgtgggagaaagcgatgtcgtttcatgggaagatgaagagtttcagagctt  3718800                                                                                            ---------                                                                                           --------->ARR11(3)                                                                                           <---------ARR14(2)                                                                                           <---------ARR11(3)                                                                                           --------->ARR14(2)                                                                                         ----------->ARR10                                                                                       --------->LBD16                                                                                   <---------ARR14(2)                                 <---------YAB1                                    --------->GLK1(2) --------->ZAT18        <---------MYB52(1)                                         --------->ARR14(2) <---------ZAT18   ------------>AtMYB77                                        <---------ICU4 --------->ZAT14   <------ZmHOX2a(1)            <----------DOF2                --------->YAB1   atgttcactcacttcttacaaggacagtttgttttatccttgggagataactttctctgtcttcaccaatgtaagttttaatcagtatccgaagatttga  3718900  Previous    Next  AGI:  At3g11760.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G04860.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39924.1) Range:  from: 3718422    to: 3721257    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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