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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
ICU4
--------->
YAB1
<---------
ATHB12
------>
MYB83
<---------
MYB46(2)
--------->
MYB46(3)
--------->
ZAT6
--------->
MYB46(3)
<---------
HSFC1(2)
<---------
ATHB12
--------->
HSFC1(2)
<---------
ICU4
--------->
HSFB2a(1)
------>
ZmHOX2a(1)
<---------
ICU4
<---------
HSFB2a(1)
--------->
ARR14(2)
--------->
YAB1
------->
TEIL
--------->
GLK1(2)
--------->
ANAC46
--------->
ANAC58
<---------
ARR14(2)
--------->
HSFB2a(2)
--------->
ANAC58
--------->
MYB52(1)
------>
MYB46(1)
<---------
YAB1
<---------
DOF5.7(2)
<---------
ARR11(3)
<-----------
GT1
--------->
WOX13(1)
<---------
MYB52(2)
<---------------
AGL15
--------->
YAB1
<---------
HSFB2a(2)
--------->
ANAC46
<------
ZmHOX2a(1)
taactaaaacaagaactaagagaatcctaatcaccaaacattaccagaaacatctatcatcgttacaagtaaacgaac
cttgcactaggagctcgtctag
3619200
--------->
ANAC58
--------->
ANAC58
--------->
ANAC58
--------->
ANAC58
----------->
GT1
--------->
ANAC58
<---------
TOE2(3)
------>
MYB83
--------->
ANAC46
--------->
AtLEC2
----------->
HVH21
------>
MYB46(1)
------->
GAMYB
--------->
ANAC58
---------->
DOF2
=================
<-------
TEIL
--------->
ANAC58
<---------------------
WRI1
<---------
O2
=================
<-----------
RAV1(2)
--------->
ANAC58
<------
ZmHOX2a(2)
----------->
RAV1(1)
<------
ZmHOX2a(1)
ggacttcaggttcaaactcaacaggcaagccaaggaagccatggaaacgatcaaaggtaacatgagcgacatgtctaacatctgtaggaacaccaatctc
3619300
--------->
YAB1
<---------
ATHB12
------>
MYB46(1)
--------->
WOX13(1)
<---------
ALFIN1
------>
MYB46(1)
------>
MYB83
------>
MYB83
----------->
RAV1(1)
--------->
MYB46(3)
------>
ZmHOX2a(1)
--------->
MYB46(3)
------>
ZmHOX2a(2)
--------->
AtMYB61
<------
ZmHOX2a(2)
------>
MYB83
--------->
HSFB2a(1)
--------->
ARR14(3)
------>
MYB46(1)
<-----------
ARR10
<---------
GLK1(2)
--------->
MYB46(3)
------->
TEIL
<---------
ARR14(3)
<---------
MYB55(2)
<---------
ARR14(2)
<---------
ARR14(2)
<---------
MYB111(2)
--------->
ARR14(2)
--------->
ARR11(3)
--------->
ANAC46
--------->
GLK1(2)
--------->
ARR14(2)
--------->
ANAC58
<---------
ARR11(1)
<---------
ARR11(3)
--------->
ANAC58
<---------
YAB1
--------->
GLK1(2)
<---------
CCA1(2)
----------->
ARR10
------->
GAMYB
<---------
ARR11(3)
--------->
ARR14(2)
<---------
ARR14(1)
---------->
DOF2
--------->
AtMYB61
--------->
ARR11(3)
<---------
GLK1(2)
---------->
DOF2
================
HOX2a_HOX2a
--------->
DEAR3(1)
--------------->
AGL15
<---------
At4g35610
=================
HOX2a_HOX2a
--------->
ANAC46
<---------------
AGL15
--------->
At4g35610
cattgaacaaagatcctcttcaccaacacacccaccaatcacagaccttctaatagcagaaacaagaatctccaatgcagatgaaagctcgaatctttct
3619400
------
------>
NtERF2
<---------
ANAC58
<---------
ANAC58
--------->
ATHB51
-------->
ATHB1
--------->
ATHB12
------>
ZmHOX2a(1)
--------->
GLK1(2)
<---------
ICU4
------>
ZmHOX2a(1)
---------->
DOF2
--------->
ICU4
<------------------------
ANAC81
--------->
TOE2(3)
<---------
PCF2
<---------
YAB1
<----------
DOF2
------>
ZmHOX2a(1)
----------->
GT1
--------->
ALFIN1
--------->
YAB1
<---
ctctctttctcgcttctctcttcctcttcttcctcttcctcacgacgagaaatgttaaaaggagaatgtgggtctctattactaccatcattgcctcctc
3619500
<---------
WOX13(1)
<---------
YAB1
<------
ZmHOX2a(1)
<----------
DOF2
--------->
ICU4
--------->
YAB1
<---------
REM1(1)
--------->
bZIP60(1)
<---------
ICU4
<
<---------
ANAC46
--------->
ALFIN1
--------->
ATHB12
--------->
ICU4
-
>
ZmHOX2a(1)
<---------
ARR11(3)
<---------
bZIP60(1)
<---------
YAB1
<-
------
ALFIN1
--------->
ARR11(3)
----------->
HVH21
<----------
DOF2
---------->
DOF2
---------
cacatgatgtagaagaagagcttgaaggtgaagggaaatgacatgattggctcgattttagaactttagccat
tattctcaaaggataatccaaaaaaat
3619600
<---------
MYB46(3)
<---------
ANAC46
--------->
ALFIN1
<----------
DOF2
----------->
HVH21
<---------
ATHB12
---------
ARR14(2)
--------->
WOX13(1)
-------->
ARR11(3)
------------>
CBF
--------
CCA1(2)
------------>
CBF
--------->
GLK1(2)
-------
>
AHL20(2)
--------->
ATHB12
----------->
GT1
---------->
DOF2
---------->
DOF2
caaatcttggagtgatgggtactctctgaaaacagtgatggagaggtcaaaatcaatggctataaagaatcaatctttagggggaaaaagagaaaaccta
3619700
--------->
ATHB12
-------->
HAHB4
--------->
ATHB51
<--------
ATHB1
<---------
ARR11(3)
<---------
ICU4
--------->
ARR11(3)
<---------
AHL20(2)
--------->
YAB1
<---------
YAB1
<---------
TOE2(3)
--------->
ICU4
--------->
AHL20(2)
<---------
ATHB51
<---------
AHL20(2)
--------->
AHL20(2)
--------->
ICU4
----------->
GT1
----------->
GT1
----------->
GT1
<-
--------->
ZAT18
<---------
ANAC46
------
<---------
ZAT18
<---------
LBD16
<----------
DOF2
<------
--------->
ZAT14
<---------
MYB52(1)
<---------
DAG2
------>
NtERF2
<------------
CBF
<---------
YAB1
<-------
GAMYB
<------------
CBF
----------->
GT1
<--------
-->
TOE1(2)
<---------
ZAT14
<-----------
RAV1(1)
---------->
DOF2
----------->
HVH21
gaaaattggattagtggagtaattaatgatatttctgttggggaaaataattgggaaactcaaaagattaaaactttttgggtattactaagcgacgcgt
3619800
<-----------
GT1
<---------
ANAC58
<---------
ANAC46
<---------
ANAC58
<---------
RAP2.6(2)
<------
MYB46(1)
--------->
ZAT6
<------
MYB83
--------->
YAB1
<---------
MYB46(3)
<---------
MYB46(3)
--------->
MYB55(2)
--------->
MYB111(2)
--------->
GLK1(2)
<---------
AtMYB61
<-----------
GT1
<---------
ARR14(2)
<------------
CBF
--------->
MYB111(1)
--------->
ZAT14
<<<<<<<<<
TBF1
------>
ZmHOX2a(1)
--------
ZAT6
--------->
ARR11(3)
<---------
ICU4
<----------
DOF2
<<<<<<<<<
TBF1
<---------
REM1(2)
--->
REM1(2)
<---------
ARR11(3)
--------->
ICU4
<------------------------
ANAC81
---
ANAC46
<------
ZmHOX2a(1)
----------->
GT1
------------>
CBF
<<<<<<<<<
TBF1
--------->
ARR14(2)
-
ANAC46
----------->
GT1
<------
NtERF2
<---------
ZAT14
<----------
DOF2
<---------
CCA1(2)
---
agagttgaattgaagaaaggatattagttggtggcttgtaattatcacttcacaatctttctttctttcttcttcttcttcgtatcctatacacagagaa
3619900
<------
MYB46(1)
<------
MYB83
<---------
MYB46(3)
<---------
DEAR3(1)
--------->
MYB111(2)
<---------
AtMYB61
--------->
MYB46(2)
--------->
MYB55(2)
--------->
MYB111(1)
<---------
MYB46(3)
<--------
P
<---------
MYB55(1)
<---------
ZAT2
<-------
GAMYB
--------->
At4g35610
<---------
MYB46(3)
<------
ZmHOX2a(1)
--------->
MYB55(2)
<---------
TOE2(3)
--------->
ZAT2
<---------
AtMYB61
--------->
MYB52(1)
<---------
At4g35610
<---------
<------
MYB46(1)
<------
ZmHOX2a(1)
------->
TEIL
<---------
AHL20(2)
<---------
AtMYB61
<---------
TOE2(3)
<---------
YAB1
<----------
DOF2
<---------
DAG2
------->
DOF2
<------
MYB83
<---------
REM1(1)
--------->
At4g35610
<---------
AHL20(2)
gaaagagagagagattggtggaggttggtgagagaagatgaaggattaacgaggaagatgaatgtcgagctgtcttttttattttgtgacttactttttt
3620000
--------
<-------
<--------
---------
---------
<----------
DOF2
<--------
----------->
GT1
<---------
DAG2
<--------
--------------->
AGL15
<-----------
GT1
---------
<----------
DOF2
--------->
AtLEC2
--------->
ANAC55(2)
<---------
ARR11(3)
<---------------
AGL15
----------->
GT1
--------->
ARR11(3)
-
DOF2
<----------
DOF2
---------->
DOF2
<---------
ANAC55(2)
<---------
CCA1(2)
tttggtgtctttctctttatgaagtaaagaaaccttgcaaattttgtattatgtaataactttttgtttctatgtgtatatcaaatcttacaagatatct
3620100
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AGI:
At3g11490.1
Description:
rac GTPase activating protein, putative. similar to rac GTPase activating protein, putative [Arabidopsis thaliana] (TAIR:AT5G22400.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN67621.1); contains InterPro domain RhoGAP; (InterPro:IPR000198); contains InterPro domain PAK-box/P21-Rho-binding (InterPro:IPR000095); contains InterPro domain Rho GTPase activation protein; (InterPro:IPR008936)
Range:
from: 3617529
to: 3619573
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.