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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
ANAC58
------>
ZmHOX2a(2)
--------->
ANAC46
<
===============
HOX2a_HOX2a
<---------------
AtSPL8
-
--------->
ARR11(3)
<---------------
AtSPL3
--
<---------
YAB1
<------
ZmHOX2a(1)
<---------
ANAC46
--------->
ATHB12
-----
GLK1(1)
<---------
TOE2(2)
<---------
ANAC58
<---------
YAB1
---->
GLK1(1)
------>
ZmHOX2a(1)
--------->
TOE1(2)
<---------
ANAC58
<---------
AHL20(2)
-
TOE1(2)
--------->
YAB1
<-----------------------
TaNAC69(2)
--------->
ANAC58
<-
ttcaagtcttatgatcgtgttcctctcgatattgtagtagaagacgtaggaaggcataaatgtagatgggtacttgtacgaaaacacaatttcattggtg
3446600
--------->
AtMYB61
--------->
MYB46(3)
<---------
ATHB12
--------->
HSFB2a(2)
------>
MYB46(1)
<------
MYB83
-------->
P
<------
MYB46(1)
--------->
YAB1
------>
MYB83
<---------
ANAC58
----------->
RAV1(1)
<---------
ICU4
------->
GAMYB
<---------
ANAC46
<------
NtERF2
<---------
ATHB12
------------
AtMYB77
<---------
ANAC58
--------->
ANAC58
------>
MYB83
-------->
MYB46(3)
--------->
ZAT2
--------->
ANAC58
------>
MYB46(1)
------->
At4g35610
<---------
ZAT2
<------
ZmHOX2a(1)
--------->
WOX13(1)
--------
At4g35610
<---------
TOE1(2)
----------->
RAV1(1)
--------->
AtMYB61
caactgccaaccattccaagaagtcgtagcttggtctcttctccaactacattcttccacagaggaggcaacatgtatacatgcttcgaccaatcatgtt
3446700
<---------
ALFIN1
--------->
LBD16
--------->
ANAC58
--------->
ANAC58
--------->
ANAC46
--------->
ANAC55(1)
<---------
LBD16
------>
MYB83
--------->
PCF2
------>
MYB46(1)
<---------
ARR14(2)
--------->
TOE2(3)
--------->
ARR14(2)
<---------
MYB59
<------
ZmHOX2a(1)
------->
GAMYB
<---------
HSFC1(1)
<---------
MYB52(2)
--------->
HSFB2a(2)
<---------
ANAC58
<-----------
TGA1
<---------
HSFB2a(2)
<---------
ANAC58
<-----------
HVH21
--------->
HSFC1(1)
<----------
DOF2
--------->
ZAT14
--------->
MYB46(3)
<---------
At4g35610
--------->
ANAC46
<---------
MYB52(2)
--------->
ANAC55(2)
>>>>>>>>>>>>>
tttcagcgtcttctaggacccgcaactcgaaacttttacttgttccactaacaatatcggtagactcttccgtcatcaacaaacctaatttgccattgta
3446800
<---------
At4g35610
--------->
At4g35610
--------->
DAG2
<---------
YAB1
<---------
ARR14(2)
---------->
DOF2
-----
--------->
YAB1
--------->
ARR14(2)
--------->
YAB1
<--------
<---------
YAB1
<---------
CCA1(2)
<----------
DOF2
--------->
ANAC58
>>>>
LFY
<---------
MYB46(3)
<---------
AtLEC2
--------->
ANAC58
<-
gtttatcatagttgttgaactaggcaaatctctatcgaaagtttccatgactttcataaagctgaacttctccgagctaatatcgaagcaaactactata
3446900
<------
NtERF2
<---------
ATERF1(2)
--------->
AHL20(2)
------>
NtERF2
--------->
MYB46(3)
--------->
ANAC46
-
--------->
ICU4
--------->
ATERF1(2)
------
---->
YAB1
<---------
DAG2
<------
-
YAB1
---------->
DOF2
<---------
DEAR3(1)
--------->
SPL7
----------->
RAV1(1)
----------
GT1
<----------
DOF2
<---------
YAB1
--------->
At5g28300
<------
ZmHOX2a(1)
---------
gtaaccattaaagaccctttttcgacggcagtataatacaaaacactgttaatgcatatttcagtaccacgaggaacatggggtttgcaacattcaatca
3447000
<---------
ARR11(3)
----->
ZmHOX2a(1)
--->
YAB1
<---------
MYB52(1)
-
---
ATHB12
<---------
ZAT6
<------------
CBF
--------->
TOE2(3)
-------
>
WOX13(1)
<----------
DOF2
--------->
ARR11(3)
--------->
YAB1
--------->
TOE1(3)
<---------
ZAT6
t
cctccatgattttcttttagtttctagtgttagaacttgatactcttggcattgatactcgttagccaaaaccttgaactgtttcttagtcttacaaaa
3447100
--------->
TOE1(3)
<---------
MYB59
--------->
ICU4
--------->
ZAT18
--------->
AHL20(1)
<---------
ZAT18
--------->
CCA1(2)
--------->
AHL20(2)
<------------
CBF
--------->
TOE2(3)
--------->
AHL20(2)
<----
--------->
DOF2
<---------
ICU4
----------->
GT1
<---------
AHL20(2)
--------->
AHL20(2)
--->
DOF2
------------>
CBF
---------->
DOF2
<-----------
GT1
---------->
DOF2
<---------
AHL20(2)
gtaaaagaattgtgcaatacttgcaacctaaaaagataaacatctaatatttcacacattttataaaacaaaagaattaaaaatttaaaatatgttattt
3447200
----------->
GT1
-------->
HAHB4
--------->
AHL20(2)
<---------
AHL20(2)
--------->
YAB1
--------->
AHL20(2)
--------->
ICU4
<---------
YAB1
<---------
AHL20(1)
<---------
ICU4
--------->
AHL20(2)
--------->
AHL20(1)
--------->
YAB1
<----
<---------
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
------
<---------
AHL20(1)
<---------
AHL20(2)
--------->
AHL20(1)
<-----
--------->
AHL20(2)
<---------
HSFB2a(2)
<---------
ICU4
--------->
AHL20(2)
--------->
AHL20(1)
--------->
AHL20(1)
--------->
HSFB2a(2)
<---------
YAB1
<---------
AHL20(2)
<---------
AHL20(1)
<---------
AHL20(2)
------------>
CBF
------------>
CBF
--------->
AHL20(2)
--------->
AHL20(2)
-----
AHL20(2)
<-----------
GT1
<---------
LBD16
--------->
YAB1
<---------
AHL20(2)
<---------
AHL20(2)
tttgaatttatttttagtaaccttgctccaatttctggatttaaacaacaattataatttcagaattaaattaaaaatgatggtaacaacaaatttatta
3447300
<---------
SPL7
<---------
ANAC58
<---------
ANAC58
<---------
ANAC46
<---------------
AtSPL8
--------------->
AtSPL3
--------->
O2
<---------
bZIP60(1)
=============================
MYC_MYB
<---------
TGA1a
--------->
bZIP60(1)
<---------
ANAC58
<---------
ANAC58
<---------
O2
<---------
ANAC55(2)
--------->
O2
===============================
bZIP_DOF
------->
GAMYB
<---------
YAB1
<---------
DAG2
<---------
ANAC46
--------->
At4g35610
--------->
ICU4
<----------
DOF2
--------->
TGA1a
--------->
ANAC46
--------->
YAB1
--------->
AHL20(2)
--------->
ANAC55(2)
<---------
At4g35610
-----
AHL20(2)
------>
ZmHOX2a(2)
--------->
ARR11(3)
----------->
STF1
--------->
ANAC58
--->
AHL20(2)
<---------
ARR11(3)
--------->
GLK1(2)
----------->
HVH21
--------->
ANAC58
----
AHL20(2)
--------->
ARR11(3)
<---------
AHL20(2)
--------->
LBD16
<---------
WOX13(1)
<---------
O2
atttttgttttgtcatgatcttaaacaaacctataaaatctgtctactttattaacccagagcattgacgtgattgtcgtacaggcaactgcaacgtctc
3447400
----------->
GT1
----------->
GT1
--------->
ANAC55(2)
<---------------
AGL15
<---------
ANAC46
--------------->
AGL15
<---------
ANAC55(2)
<-----------------
AGL1
<---------
LBD16
----------------->
AGL1
--------->
AHL20(1)
----------------->
AGL2
--------->
YAB1
<-----------------
AG
--------->
AHL20(2)
<----------
DOF2
---------->
DOF2
--------->
DAG2
<---------
YAB1
--------->
ARR14(2)
<-----------
HVH21
---------->
DOF2
<----
--------->
At4g35610
<---------
ALFIN1
<---------
ZAT6
----------------->
AG
<----
tctgcattctctgatgaataatattacggaaacacccctataactttccattttagtgtcaaagcccaaaaacccaaaagggtaaactcgtctcataaat
3447500
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AGI:
At3g10990.1
Description:
F-box family protein. similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT3G23960.1); contains InterPro domain F-box associated type 3 (InterPro:IPR013187); contains InterPro domain F-box associated type 1 (InterPro:IPR006527)
Range:
from: 3446468
to: 3447001
Orientation: Reverse
Links:
TAIR
MIPS
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publications
when using AthaMap.
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