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Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                <---------ANAC58
                                                                                <---------ANAC46
                                                                            <------NtERF2   <-------
                                                                            <-------GAMYB   --------
                                                                            --------->ATERF1(1)
                                                                           <---------DEAR3(1)
                                                                           <---------MYB46(3)
                                                                           --------->MYB55(2)
                                                                          <---------ANAC58<---------ANAC58
                                                                          <---------ANAC46<---------RAP2.6(2)
                                      <---------ANAC58                    <---------ANAC58<---------RAP2.3(2)
                                      <---------ANAC58                   <------NtERF2    <---------ANAC58
                                      <---------ANAC46                   <---------LBD16  <---------RAP2.3(3)
         --------->YAB1              <------NtERF2                   <-------GAMYB<---------MYB52(1)
        <---------YAB1           <------MYB46(1)                    <---------ANAC58  <---------ANAC58
      --------->YAB1             <------MYB83                       <---------ANAC58  <---------ANAC46
 --------->At4g35610            --------->MYB111(1)          <---------TOE2(3)  <---------ANAC58
 <---------At4g35610            --------->MYB111(2) <---------MYB52(1) <---------DEAR3(1)<---------LBD16
----->DAG2           --------->MYB52(2)            <----------DOF2  <---------ANAC46  <---------ANAC58
----->DOF2     --------------------->WRI1       ------>NtERF2<---------TOE1(3) <-------TEIL<--------
 
aagcagctaaaatgataaccatgttagtgtcgaagtaggtgtcgtttatgcctcctttgggtttagggtttgcgttggcgggtgcgtttgcttgcggctc  3413600
        ------>MYB46(1)
        ------>MYB83
      ------->GAMYB
      ----------->HVH21
      --------->DEAR3(1)
     <---------MYB52(2)
     --------->MYB46(3)
     --------->DEAR3(2)  --------->ANAC58
     <------------AtMYB77--------->ANAC58
    -------->P          <-------TEIL            ----------->GT1
  --------->MYB46(3)  <---------SPL7            <----------ID1
--At4g35610         <---------TOE2(3)    <------ZmHOX2a(1)
->At4g35610         <---------------AtSPL8     ----------->GT1
-RAP2.3(1)     <----------DOF2     --------->At4g35610  ---------->DOF2
 
aagtagcaaccgacccatcttttgaggtacgcttgagaagcagaggagagaaggaaaaaaaaagcttgatcacttcaccttcaagactcgtcttgttgga  3413700
                                                                            --------->ZAT14
                                                                            <---------ZAT14
                                   --------->GLK1(1)                      --------------->AtSPL8   <
               --------->CCA1(2)   <---------GLK1(1)                <---------AHL20(2)         <----
          ---------->DOF2     --------->GLK1(2)                 --------->AHL20(2)<----------DOF2  -
 
caaatcgaatgacaaaagagatggagaagagagaatcgatatccctcatgttcttaaaaactcttaatgaattaatctctgtactctttatttctgagct  3413800
                                 <---------ANAC46
                             <---------ANAC58                  <---------ICU4
                             <---------ANAC58              --------->AHL20(2)
               <---------ANAC58  <---------ANAC58         --------->AHL20(1)
        <---------YAB1       <---------ANAC46             --------->ARR11(3)
  <----------DOF2         ----------->HVH21               <---------AHL20(1)
 ------>ZmHOX2a(2)      --------->O2                <------NtERF2
 =============================HOX2a_HOX2a          ----------->GT1               ---------->DOF2  --
---------ARR11(3)       <---------O2  ---------->DOF2     <---------ARR11(3)<---------YAB1 <--------
------DOF2     <---------ANAC58  <---------ANAC58<------ZmHOX2a(1)        ----------->GT1  ---------
-------->ARR11(3)      ------>ZmHOX2a(1)--------->ICU4   --------->YAB1 <---------GLK1(2)--------->YAB1
 
ttgatctttttctgatttgcttcttcctcgtgacttgtgtgtaaagatgggaggaggcaaaaatatttatggcaagattgtgataaaaggagtcataaat  3413900
                                        <------MYB46(1)
                                        <------MYB83
                                       --------->MYB111(1)
                                       <---------MYB46(3)
                                       <---------AtMYB61
                                       --------->MYB59
                                      <--------P
                                     <-------GAMYB
                                    <---------MYB46(3)
                                   <---------AtMYB61
                                   <XXXXXXXXXXXXXXXXXXXXMIR3440B-5P
                                   --------->ALFIN1
                                 <---------ANAC46
                                 <---------bZIP60(2)                                     --------->AHL20(2)
                            --------->YAB1            <----------DOF2                --------->AHL20(2)
        <---------ATERF1(1)<---------YAB1          --------->GLK1(2)                <---------YAB1
<---------AHL20(2)      --------->ARR11(3)      <---------ARR11(3)               <---------YAB1
----->TEIL     <----------DOF2<---------YAB1  --------->ANAC58             <---------YAB1<---------AHL20(2)
-YAB1   ------>NtERF2   <---------ARR11(3)    --------->ANAC46           <---------CCA1(2) <--------
>ICU4  <---------DEAR3(1)--------->CCA1(2)    --------->ANAC58      <-----------GT1 --------->ICU4
 
gaatttatgggcgactctcttttgagagatatgatgatgtggttggtccaagaaattctttggttttaaaaaaaccatatcattgttattatttatatat  3414000
                                    <---------ANAC58
                                    <---------ANAC58
                                   <---------MYB46(3)
                   <---------AHL20(2)
                   --------->AHL20(2)
               <----------DOF2    <---------AtMYB61                                               <-
         ----------->GT1 <---------YAB1 <---------TOE2(3)      ----------->TBP                  ----
-------AGL15   <---------DAG2   <------------CBF   <---------YAB1                   --------->GLK1(2)
 
gtagcaagtgaatggtcactttttaattttgtttgtattggttgaggtcaaatttttattcgctctatatatcgtttgagaggctagaatcagtgatttt  3414100
                                              --------->YAB1                               <--------
                                            --------->ARR11(3)                             <--------
        --------->ANAC58               <------MYB83                                        <--------
        --------->ANAC58               <------MYB46(1)          <-----------RAV1(1) <---------DAG2
--------->AHL20(2)                <---------TOE2(3)     --------->AHL20(2)          <----------DOF2
--------------AGL15            <---------AHL20(2)       <---------AHL20(2)    --------->TOE2(2)
----->YAB1                     --------->AHL20(2)      --------->AHL20(2)     --------->TOE1(2)
 
catattaatagaagcaaaaatgcaaattttaaaattaaacgttggtatatcatggtcatttaattctatgttgttttgaaacatgcgctttttggcctgt  3414200
                                      --------->YAB1
                                      --------->AHL20(2)
                                   --------->YAB1
                                  --------->ICU4
                                --------->YAB1
                           --------->LBD16
                          --------->ANAC55(2)
                          --------->HSFB2a(2)
                          <---------ANAC55(2)
   --------------->AGL15  <---------HSFB2a(2)              --------->ATHB12
--------->GLK1(2)        <---------LBD16              ------->TEIL
-ANAC58                  ------>ZmHOX2a(2)    --------->DAG2   <-----------GT1
-ANAC46            <----------DOF2<---------YAB1      <---------YAB1    <---------YAB1
-ANAC58      --------->ZAT14   --------->ICU4---------->DOF2 <---------WOX13(1)
 
aagattccaagattagtatacactttgatccggaataataataaaaaaaaaagtatgaacattgatttacaatttatgcttaaaacacaaattagaacat  3414300
                           --------->At5g28300
                           --------->LBD16
                          ----------->GT1
                          --------->TOE2(3)       --------->ICU4
                          <---------ANAC46      --------->AHL20(2)
                       <-----------GT1         --------->AHL20(2)  <---------ZAT18
                    <---------AHL20(2)       --------->YAB1       <---------RAP2.6(2)
                --------->AHL20(2)     ------->TEIL    --------->ARR11(3)
                <---------AHL20(2) --------------->AtSPL8       <-----------RAV1(1)
            --------->AHL20(2)     ------->TEIL<---------AHL20(2) ---------->ID1   --------->GLK1(2)
            <---------AHL20(2)     <---------------AtSPL8------>ZmHOX2a(2)   <---------PCF2        <
 
gtattgggccactatatatataatttataccgtaaatgtatgtaccaaaaataattttgatctctatttgtggccttgtgggacacaatctttgttcaaa  3414400
                                                                                                 ---
                                                                                                <---
                                                                                 --------->CCA1(2)
                                          ---------->DOF2                       <---------ARR11(3)
           <---------MYB52(1)     <------ZmHOX2a(1)                             --------->ARR11(1)
         <---------MYB46(3)     <---------TOE2(3)              ---------->DOF2  --------->ARR14(2)
---------YAB1 <---------ANAC46---------->DOF2     <----------ID1                <---------ARR14(2)--
 
tgtttattgtatcggttgtgtattggataaatataaaggatagagcaaagaagaagacaaataagaaaaagattagtttagtagatatgagaattgacaa  3414500
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AGI:  At3g10910.1   
Description:  zinc finger (C3HC4-type RING finger) family protein. Identical to RING-H2 finger protein ATL3C (ATL3C) [Arabidopsis Thaliana] (GB:Q9SG96); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G05280.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48869.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841)
Range:  from: 3412916    to: 3414024    Orientation: Reverse
Links:  TAIR  MIPS 
 
AGI:  At3g10912.1   
Description:  CPuORF63 (Conserved peptide upstream open reading frame 63)
Range:  from: 3412916    to: 3414024    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
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