Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                --------->AtMYB61                                            ------->TEIL                                           <---------ALFIN1                                         --------->ANAC46         ------>MYB46(1)                   --------->YAB1  <---------WOX13(1) <---------ANAC46      <----------DOF2  <---------AHL20(2)             --------->ATHB12   ------>ZmHOX2a(1)    ------>NtERF2  --------->AHL20(2)            --------->ICU4<---------ALFIN1    ------>MYB83  <---------AHL20(1)   <---------AHL20(2)<---------ANAC55(2)    ------->GAMYB  --------->AHL20(1)  --------->AHL20(2) --------->ANAC58       <---------MYB59 --------->AHL20(2)--------->TOE1(3)     --------->ANAC55(2)  --------->ANAC58 <---------AHL20(2)--------->TOE2(3)     --------->ANAC58     --------->ANAC58     <---------ARR11(3)   aaattaaatttcaagtcttaaccataaaattgcattgattaatacgcacctctccttcgtagacaaccaaattgacgcctttcagtatctcttgtctcga  3337000                                                   <-----------TGA1                                                   <-----------HVH21                                                  --------->TGA1a                                                  --------->ANAC46                                                  --------->bZIP60(2)                                                  --------->bZIP60(1)                                                  --------->ANAC58                                                  <---------TGA1a                                 ---                                                  --------->ANAC58         ------->TEIL           ---                                             --------->ANAC46              --------->GLK1(2)      ---                                            ------>ZmHOX2a(1)              --------->ARR14(2)     ---                                            ========================HOX2a_HOX2a                   ---                                          ------>ZmHOX2a(2)                <---------ARR14(2)     <--                                         <------ZmHOX2a(2)   <------ZmHOX2a(2)                   <---                                        <---------ARR14(2)  <---------ARR14(3)                  -----                                        --------->ARR14(2)  --------->ARR11(3)                  -----                                        <---------ARR11(3)  <---------ARR11(3)                 <-----                                        --------->ARR14(3)  --------->ARR14(3)                 ------                                        <---------ARR14(3)  <---------ARR14(2)                 ------                                        --------->ARR11(3)  --------->ARR14(2)    --------->DEAR3(2)                                     ----------------------->TaNAC69(2) <---------ATHB12      <------ZmHOX2a(1)                                     =======================MYC_MYB     --------->MYB46(3)  <--------          <---------ZAT14            ------->GAMYB--------->ANAC55(1)  ------>MYB46(1)  --------->At4g35610          --------->ZAT14         --------->MYB52(1)--------->TGA2(2)  ------>MYB83----------->HVH21          <---------ZAT18       --------->MYB46(3)--------->O2        --------->MYB52(1)<---------ZAT2      <---------ICU4           --------->ANAC58   <---------O2------>ZmHOX2a(2)  --------->ARR14(2)     <---------ATHB12          --------->ANAC46  <-----------STF1    --------->AtMYB61  <---------At4g35610     --------->MYB46(3)        --------->ANAC58 <---------ALFIN1     --------->DEAR3(1)------>NtERF2   --------->WOX13(1)        ---------->DOF2=========================HOX2a_HOX2a <---------ARR14(2) <---------At4g35610         ===============================bZIP_DOF--------->MYB46(3)<---------DEAR3(1)   ttcagcaatcactgctctcaaatccctaacttcaagcaacgggatcctccccacgtcatcacgatcttccaccaacgaatccgaatcgacggctgaggat  3337100                                                       <---------ANAC46                                                      <---------LBD16                                                      --------->RAP2.3(1)                                                      <------NtERF2                                                      <---------At4g35610                                                      --------->At4g35610                                                      --------->ATERF1(1)                                                     <---------DEAR4(2)                                                     <---------RRTF1(1)                                                     <---------ATERF1(1)                                                     ------>NtERF2                                                     <---------ERF1                                                     <---------ORA47(2)                                                     <---------RAP2.6(1)                                                     <---------RAP2.3(1)                                                    <---------RRTF1(3)                                                    <---------RRTF1(2)                                                    --------->ALFIN1                                                    <---------RAP2.3(3)                                                    <---------RAP2.6(2)                                                    --------->ATERF1(2)                                                    <---------ANAC46                                                    <---------ATERF1(2)                                                    --------->DEAR3(1)                                                    <---------DEAR3(1)       <------NtERF2                                <---------RAP2.3(2)       --------->RAP2.3(1)                         --------->RAP2.3(1)      ------>NtERF2                                <---------ABI4(1)     <----------ID1                                --------->ATERF1(1)   <---------ATERF1(1)                             <------NtERF2 ------>ANAC58                                    <---------DEAR4(2) ------>ANAC46                                    <---------RAP2.3(1) ------>ANAC58                                   --------->ALFIN1 ------>ANAC55(2)                                --------->ATERF1(1) ------>ANAC55(1)                                <---------DEAR3(1) -------ANAC55(2)                               --------->At4g35610 ------LBD16                              --------->ARR14(2) ---->ARR14(1)                           <------ZmHOX2a(1) ---->CCA1(2)                          <---------TOE1(2) ----ARR14(2)              <---------ANAC46     <---------At4g35610 --->ARR11(1)          --------->SPL7  <---------TOE2(2)--------->LBD16 --->ARR14(2)         --------->MYB52(1) --------->ATHB12<------NtERF2                       -------- -TOE2(3)        --------->MYB52(1)--------->ZAT18<---------ATERF1(1)                  --------->ANAC46   acggaagacgccgaaacaataactgaacggcgagtagttcgcaggattggagcggcggcggaattagctcggagattgcataatagaacacgagagggtg  3337200                                                                                          <------MYB83                                                                                    --------->At4g35610                                                                                    <---------At4g35610                                                                                    --------->ZAT2                                                                                    <---------ZAT2  -                                                                                <---------ANAC46    -                                                                                <---------bZIP60(2) -                                                                              --------->MYB52(1)   --                                                                             ----------->HVH21     <-                                                                             ----------->TGA1      --                                    <------ZmHOX2a(1)                       <-----------HVH21     ---                                 <------ZmHOX2a(1)                         --------->ANAC55(2)  -----                               --------->ALFIN1                            <---------ANAC58   <------    --------->LBD16           <------ZmHOX2a(1)                            <---------ANAC58 --------- --->GT1                <------ZmHOX2a(1)                            <---------ANAC46     <------MYB46(1)   aagtcccgaggcgaactcgctgagtaggaagaggaggaggagaagaaacagttggaacgaattgagctatggagtatgcgtgacggagctgtaggttaac  3337300                                 <---------DEAR3(1)                         <-----------RAV1(2)                         <------NtERF2                                  <------MYB46(1)                       <---------ANAC46                                 <------MYB83                      <------NtERF2                                    --------->MYB111(1)                      ------>NtERF2                                    --------->MYB46(2)                      <---------LBD16                              --------->MYB111(1)     --------->AtLEC2<---------RAP2.3(1)                           <---------MYB46(3) <------NtERF2       <---------RRTF1(1)                            --------->MYB46(2) -------->ORA47(1)  <---------ANAC46                               --------->MYB52(2) -------->LBD16     <---------RRTF1(2)                           <---------MYB52(1) ----->NtERF2       <---------RAP2.3(3)                         <-------GAMYB--------->LBD16 ------->DEAR3(1)   <---------RAP2.6(2)                     <---------bZIP60(2)      <----------DOF2 --------ATERF1(2)  <---------ANAC58                 <---------ZAT14   --------->MYB59        <------ ------->ATERF1(2)  <---------DEAR3(1)            --------->LBD16<--------P<-------TEIL --------->AHL20(2) ------>ATERF1(1)   <---------RAP2.3(2)         <---------LBD16----------->GT1    --------->GLK1(2) ---->ANAC46        <---------ANAC58          <-----------GT1  <---------MYB46(3)<---------GLK1(2) ---DOF5.7(2)       <---------RRTF1(3) <---------AtMYB61    <---------ANAC46<---------LBD16 *TSS >DOF5.7(2)        <---------LBD16  --------->ALFIN1 --------->ZAT14 <---------MYB52(1) <---------AHL20(2)   gccggccatggagacagaaattgcggcggaagaagacggtggaggttttatccggtgaagtgatgtggttagttaggtccagggattcttttaatttcac  3337400                 --------->AHL20(2)                 ----------->TBP                --------->AHL20(1)       --------->AHL20(2)                <---------AHL20(1)       <---------AHL20(2)          --------->ANAC55(2)           --------->AHL20(2)          --------->ANAC55(1)           --------->YAB1          --------->ANAC46              <---------AHL20(2)          --------->bZIP60(2)          <---------------AGL15                             <----------DOF2          --------->O2 --------->RAP2.6(3)    ----------->GT1                      <---------bZIP60(1)          <---------ANAC55(2)          --------------->AGL15                       --------->bZIP60(1)          --------->ANAC58            <-----------------AGL1                    --------->ANAC46          ----------->GT1             <-----------------AGL3   ----------->GT1  --------->ANAC58 -----GT1 --------->ANAC58        --------->TOE2(3)       --------->AHL20(2)    --------->ANAC58   atgttgaatgccacgtaatatatatatcggctactagcttaattaaaatggaaacaaaaaaaaaatggaaataacaaataaaacgacatcactttgtgtt  3337500      <---------ARR14(2)      --------->KAN4(2)           <---------ANAC58      --------->ARR14(2)          <---------ANAC58     <-----------GT1     <----------TaMYB80       <----------DOF2 XXXXXXXXXXXXXXXXXXXX>MIR822                           - --------->ANAC58 --------->TOE1(3)          --------->ANAC58                 <---------------------WRI1 <---------ANAC55(2)  ---------->DOF2        --------->ANAC58      --------->ARR11(3)         <------ --------->ANAC58 --------->TOE2(3)          --------->ANAC46      <---------ARR11(3)    ---------->DOF2   gatacgcatattcttcaaaaccttaaaagcttctttccttgaagtacaagaaactatttacacatatgagaccttgggatgaagaaacagacaaagtcca  3337600                                     --------->RVE1(1)                                    <---------ARR11(3)             ------>ZmHOX2a(1)      --------->GLK1(2)            --------->TOE2(3)       --------->ARR11(3)           --------->YAB1          <---------GLK1(2)     --------->ANAC58         --------->TOE2(3)                         --------->WOX13(1)     --------->ANAC58     <---------MYB52(1)                       <-------TEIL   ---------->DOF2      <---------ANAC55(2)              <---------CCA1(2) -------->TOE2(3)       --------->ANAC55(2)          <----------DOF2--------->ANAC46 -TEIL------------>CBF  --------->TOE2(3)    <-----------GT1      <-----------GT1   taccctaaagcaatcctaaacccataccgtaatctcaaaatctcttcttacctctctttctatcttatatacatcattcaaacattttttatgttttcat  3337700                                                                                <------NtERF2                                                                                --------->ATERF1(1)                                                                               <---------ERF1                                                                               <---------RAP2.3(1)                                                                               ------>NtERF2                                                                               <---------ORA47(2)                                                                              --------->ATERF1(2)                                                                              <---------DREB2C(2)                                                                              <---------RAP2.3(3)                                                                              <---------RRTF1(2)                            <----------DOF2                                   <---------RRTF1(3)                   <---------ANAC58                                     <---------ARR14(2)                   <---------ANAC55(2)                           <---------AHL20(2)                   <---------ANAC46                            ----------->TBP<---------ATERF1(2)                   <---------ANAC58         =====================HOX2a_HOX2a  <---------ANAC46              --------->AHL20(2)            ------>ZmHOX2a(1)----------->TBP  <---------DEAR3(1)              <---------AHL20(2)   <---------DAG2         ------>ZmHOX2a(2)   <---------RAP2.3(2)             --------->AHL20(2)    <----------DOF2  <---------ZAT6      --------->ARR14(2)         <-------TEIL ---------->DOF2    ---------->ID1 --------->ARR11(3)    <---------RAP2.6(2)   atacagtttgattcatttatttcgtaaaggctttgaactttttgtcctgatatagtgtgatctatatataaacatatatggcggcgattttcaagagacc  3337800                              <---------ATERF1(1)                           ----------->RAV1(2)                           =====================RAV                           <---------At4g35610                     --------->LBD16                     ------>NtERF2                    --------->ANAC58                    --------->ANAC58               <---------MYB52(1)   ----------->RAV1(1)               <------NtERF2  ------>NtERF2              <-----------HVH21--------->ATERF1(1)              <---------RAP2.6(3)  <---------ETT(1)                                ==================             --------->RAP2.6(2)   ----------->HVH21                               ==================           <------NtERF2 <------NtERF2                                             ------>ZmHOX2a(2)         <---------RAP2.6(2)<---------MYB52(1)                                    ===================         --------->ALFIN1--------->MYB46(3)                                       ===================        --------->ATERF1(1)--------->At4g35610                                    <---------HSFB2a(1)       <------MYB83 ------->GAMYB <------NtERF2                                   --------->HSFB2a(1)       <------MYB46(1) <---------ALFIN1                                           <------ZmHOX2a(2)       <---------ZAT2<---------ATERF1(1)                                          --------->HSFC1(2)       ----------------------->TaNAC69(2)                                        --------->ARR14(3)       --------->ZAT2<-----------HVH21                                           --------->ARR14(2)       <---------bZIP60(2)--------->DEAR3(1)                                     <---------ARR14(3)      <---------DEAR3(1)------>NtERF2                                            <---------ARR11(1)      <---------AtMYB61--------->DEAR3(1)                                        <---------ARR14(2)      --------->ALFIN1 --------->AtMYB61                                         --------->ARR11(3)    <------NtERF2   --------->RAP2.6(2)                                          <---------ARR11(3)    <---------MYB52(1)--------->MYB46(3)                                         <-----------ARR10   --------->LBD16  --------->ANAC46------>NtERF2                              --------->LBD16 ------   <------NtERF2   --------->MYB46(3)                                        <---------LBD16<--------  <---------LBD16 --------->At4g35610                        --------->At4g35610<---------CCA1(2)   - <---------LBD16  <---------At4g35610                        <---------At4g35610<---------ARR14(1)  -   aaggccgggaggtggccgtcatccgccaccgctggctccgacagtgagtagtttcaagccgagagctcaatggactaactccggatcttccattttcctc  3337900  Previous    Next  AGI:  At3g10670.1    Description:  ATNAP7 (Arabidopsis thaliana non-intrinsic ABC protein 7). Identical to Non-intrinsic ABC protein 7, chloroplast precursor (NAP7) [Arabidopsis Thaliana] (GB:Q9CAF5;GB:Q8LF74;GB:Q9LPN3;GB:Q9SG74); similar to ATNAP13 (EMBRYO DEFECTIVE 2751) [Arabidopsis thaliana] (TAIR:AT4G33460.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64891.1); contains InterPro domain SUF system FeS cluster assembly, SufC ATPase; (InterPro:IPR010230); contains InterPro domain ABC transporter related; (InterPro:IPR003439); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593) Range:  from: 3335054    to: 3337392    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g10680.1    Description:  heat shock protein-related. similar to RTM2 (RESTRICTED TEV MOVEMENT 2) [Arabidopsis thaliana] (TAIR:AT5G04890.1); similar to AGAP002737-PA [Anopheles gambiae str. PEST] (GB:XP_312188.4); contains InterPro domain HSP20-like chaperone (InterPro:IPR008978); contains InterPro domain Heat shock protein Hsp20 (InterPro:IPR002068) Range:  from: 3337778    to: 3339350    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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