Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       <------ZmHOX2a(1)                                               <---------YAB1                   --------->AHL20(1)          =============HOX2a_HOX2a                  --------->YAB1               <------ZmHOX2a(2)                --------->AHL20(2)            <---------ARR11(3)                <---------AHL20(2)            --------->ARR11(3)             --------->AHL20(2)            <---------TOE1(2)            --------->AHL20(2)           --------->TOE1(2)          --------->TOE2(3)             --------->YAB1            <---------AHL20(2)      <---------ZAT18            ----------->GT1 --------->TOE1(2)--------->AHL20(2)      --------->ETT(2) <---------YAB1   ----------->GT1      <-------TEIL                         <--   ctatattgtccacattaaaaaaataatgctagaatgtgtaaatcgtaagatcataggactaaatacattttaatctcagaaatgaactatgtgaattatg  3312400                           --------->CCA1(2)                        --------->ATHB51                           <------ZmHOX2a(2)                 <---------YAB1                          --------->ARR14(2)              --------->ICU4                          <---------ARR11(3)            <--------HAHB4                          <---------ARR14(2)            --------->YAB1                     <---------STY1(2)                  <---------ICU4            <---------ANAC58                     --------->STY1(2)                  -------->ATHB1            <---------ANAC58               <---------ANAC58                        <---------ATHB12           <---------ANAC46               <---------ANAC58                        --------->ICU4             <---------ANAC55(2)        ==========================HOX2a_HOX2a        --------->WOX13(1)           <---------ANAC55(1)        <------ZmHOX2a(1) --------->AGP1           <---------ATHB12<---------AHL20(2)  ------->TEIL<- -------ANAC46 <---------ANAC46                 --------->ICU4     <---------YAB1 --------->ANAC55(2)   gagtctaagaggagaatgcgtctagctagatccacaaaccaataccagtactaatcaatcattatgtttataattgaaacttatacgtgtatgtaaattc  3312500              <---------ICU4              --------->YAB1                                                                ------->TEIL           --------->YAB1                                                                --------->ANAC58     --------->MYB52(1)                                                                  --------->ANAC58   <---------MYB46(2)                                                                   --------->SPL7   <---------MYB52(2)                                                                 <---------SPL7   <---------MYB111(1)             --------->TOE2(3)                                <---------------AtSPL3 --------MYB52(2)          <---------ATHB12                <----------DOF2       ------>NtERF2<------   cactaactaacaaaaatcataactcatcactcattaatcttatatacttactcatgtgtttctttggtccatatagttctctcggcctggtacgaacttt  3312600                                                           <---------YAB1                                                           ==================================HOX2a_HOX2a                                                           <------ZmHOX2a(2)                                                          --------->ARR11(3)                  --------->ATHB12                        <---------ARR11(3)        ------>ZmHOX2a(1)   --------->ANAC58          ---------->DOF2       --------->TOE2(3)    --------->ANAC58    <---------CCA1(2)        <---------ANAC46       --------->TOE1(3)   --------->DAG2   ------>ZmHOX2a(2)            <---------ANAC58           -    <---------ARR11(3)    ---------->DOF2  <------ZmHOX2a(2)             <---------ANAC58       -----    <---------ARR14(2)  <------ZmHOX2a(1) <---------ARR14(2)    <---------WRKY18(1)       --------->YAB1    --------->ARR14(2)  ==========================HOX2a_HOX2a  --------->WRKY38(1)    ------>ZmHOX2a(1)   <---------CCA1(2)    ===========================HOX2a_HOX2a --------->WRKY12       =============== ----DOF2        --------->AHL20(2)       --------->ARR14(2)--------->ATHB12         --------->TOE2(3)   gagccatatccttagtcaattcattaggaaaagctactcgactggatcccatctctaaaagatcattgaccaattccttgtaatgctccttaacatcatc  3312700                                                      <---------ZAT18                           <----                       <---------ALFIN1               --------->ZAT14                           <----                      <------NtERF2                   <---------ZAT14                           <----                     ----------->RAV1(1)       --------->DAG2                  <---------ARR11(3)                    ----------->HVH21         --------->DAG2                   --------->ARR11(3)   <------ZmHOX2a(2)--------->DEAR3(1)        ---------->DOF2           --------->TOE2(3)     <------ -------->DEAR3(1) <------NtERF2             ---------->DOF2            --------------------->WRI1 ---->MYB46(3)   <---------DEAR3(1)     --------->ANAC58           <---------ZAT18           <------- =========HOX2a_HOX2a------>NtERF2      --------->ANAC58           --------->ZAT14         ------>ZmHOX2a(1)   caccgatctatccacatactcggcgacactctcaaaccgagtaagcaaaaaggcagtgaacatcaccagtgcatccttgaacatctcgttctcctctgtc  3312800                                                                     <---------ARR14(2)     ------->TEIL                                                    --------->GLK1(2)      --------- -----ANAC58                                                         --------->ARR14(2)    <---------AHL20(2) -----ETT(2)     <---------ICU4      <------ZmHOX2a(1)          <---------ANAC46          --------->AHL20(2) -----ANAC58    <---------YAB1      *TSS           --------->ANAC46  ------->TEIL      <-----------TBP -----HVH21     <---------ATHB12   <---------TOE1(3)            ----------->GT1  --------->ZAT14 ----RAV1(1)    --------->ICU4     <---------TOE2(3)  --------->MYB52(1)         <---------ZAT14   gtccatgaattttcagccatgattcccaaaacaaattaaggaaaatgaagtctacaaaacagaatggtgtgaatctggagaactacagtatatataataa  3312900                                               --------->AHL20(1)                                  --------->ANAC55(2)                        --------->WOX13(1)     --------->ARR11(3)                 <---------ZAT2   --------->ANAC58                 <------NtERF2    <---------ANAC55(2)                                <-----------GT1                 <---------At4g35610          --------->AHL20(2)                  <---------TOE2(3)                 --------->At4g35610        --------->AHL20(2)             ----------->GT1          --------->CCA1(2)       --------->ANAC46                       <---------ANAC58         --------->ARR14(2)       --------->ANAC58   <---------ANAC58    <---------ANAC46    <------- >YAB1   <---------ARR14(2)  --------->At4g35610     <---------ANAC58    <---------ANAC58    <-------   ctcatgtaagggatatggcagcttataaatcaactcaagtaacaaaaaatatatggcttctcttctctcaaattggggtgtattaagtttccttcctttt  3313000                                   <----------DOF2                            <---------ARR14(2)                   <---------AHL20(1)                   --------->AHL20(1)                   --------->AHL20(2)                                       <---------WOX13(1)                   <---------AHL20(2)                      <---------AHL20(2)        --------->WOX13(1)                  --------->AHL20(2)                       --------->AHL20(2)--------->AHL20(2)            --------->At5g28300 <-----------GT1            <---------AHL20(1)<---------AHL20(2) --DAG2---------->DOF2      --------->ARR11(3)       <----------DOF2        <----------DOF2 ---DOF2   ----------->GT1  <---------GLK1(2)  ---------->DOF2 <-----------GT1     <---------YAB1   -   tcttatattcaaagggtaaattttatttcagattttgctatattgcatacaaagtctttattttatttctttctactgatttattgtcattcatttagtt  3313100                                                                         <---------AHL20(1)                                                               <---------------AtSPL8      ------->MYC3               <---------AHL20(2)                             <---------ANAC58             <-------MYC3               <---------AHL20(1)                             <---------ANAC55(2)          ------->MYC4               --------->AHL20(2)                             <---------ANAC58            --------->O2              --------->AHL20(2)                              <---------ANAC55(1)         --------->ANAC55(2)              <---------AHL20(2)                              --------->ANAC55(2)         <---------ANAC55(2)          <---------AHL20(2)                                  <---------ANAC46  <---------AHL20(2)          --------->AHL20(2)       <---------TOE2(3)         <-------TEIL--------->AHL20(2)<-------MYC4          <---------YAB1          <-----------GT1           --------->CCA1(2)  <---------YAB1      --       ------>ZmHOX2a(1)       <---------ICU4             --------->YAB1 <---------AHL20(2)------->MYC2       <----------DOF2       <---------AHL20(2)          <---------YAB1  --------->AHL20(1)<-------MYC2   <---------ARR11(3)       --------->YAB1           <---------GLK1(2)  --------->AHL20(2)--------->TGA1a  <---------CCA1(2)        <---------YAB1         --------->YAB1        <---------AHL20(2)<---------O2 ----->ZmHOX2a(1)        --------->YAB1        --------->WOX13(1)--------->REM1(2)        <---------TGA1a   tcctatatcctttttattaaatttgttttataatattgacgattttagccaattagattatgatacgtgtacaaataaatttttattttcacacgtgtta  3313200               <---------ANAC55(1)               --------->ANAC55(2)                                      ----------->GT1               <---------ANAC58            ------->MYC4                <-------MYC4               <---------ANAC46            ------->MYC3                ------->MYC2               <---------ANAC58            <-------MYC4                ------->MYC4               <---------ANAC55(2)         <-------MYC3                <-------MYC3              <-------TEIL                 <-------MYC2                <-------MYC2             --------->CCA1(2)             ------->MYC2                ------->MYC3           --------->YAB1                 --------->TGA1a             <---------ANAC55(2)          <---------YAB1                  <---------ANAC55(2)         <---------TGA1a        --------->YAB1                    <---------TGA1a             --------->TGA1a        <---------ICU4                    <---------O2                <---------O2          >>>>>>>>>MYB98       --------->ICU4         --------->YAB1                          --------->ANAC55(2) <----------  --------->YAB1           --------->WOX13(1)              <---------TOE2(3)             --------->AHL20(2) <---------ATHB12    <---------At5g28300  --------->ANAC55(2)         --------->O2<---------AHL20(2) ------->WOX13(1) <-----------HVH21       --------->O2   <---------AHL20(2)       --------->AHL20(2)   gcaatcagaattatgatacgtgttacagccaattagattataacacgtgtataaacaaatttatgttttcacacgtgttaaaaattaaaaatttaacata  3313300  Previous    Next  AGI:  At3g10595.1    Description:  myb family transcription factor. similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT5G04760.1); similar to I-box binding factor [Solanum lycopersicum] (GB:CAB65169.1); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778) Range:  from: 3311790    to: 3312836    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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