AthaMap TU-Logo
Search
 
   Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
Go to graphical and table display 

1        10        20        30        40        50        60        70        80        90        100 
                                                                                       <------MYB46(1)
                                                                                       <---------MYB46(3)
                                                      <---------ANAC55(1)              <------MYB83
                                                      <---------ANAC58               <--------P
                                                      <---------ANAC58           <---------ANAC58
                                                      --------->ANAC55(2)        <---------ANAC58
    --------------->AtSPL8            --------->ZAT6  <---------ANAC55(2)     <-----------GT1  -----
------>ARR11(3)                     --------->YAB1    <---------ANAC46    <---------DAG2       <----
-------GLK1(2)                 ----------->GT1    <---------MYB52(2)      <----------DOF2     <-----
 
gattttgtctgtacattttggtttattaacaaaaatgtataatactaaaaacaacttacgtattctattgggagtctctttttgccttgttggtttattt  3185900
                        <------MYB83
                        <------MYB46(1)
                        ----------->GT1                                    --------->ANAC55(2)
                    --------->ATHB12                                       <---------ANAC55(2)
                   <---------YAB1                                          --------->ANAC58
                <-------TEIL                                               --------->ANAC58
         <-----------RAV1(1)                      --------->MYB52(2)       --------->ANAC46
         <---------MYB46(3)               <---------TOE2(3)            ------->TEIL         <-------
---->AHL20(2)<------MYB46(1)        <---------GLK1(2)             <---------ANAC46          <-------
-----AHL20(2)<---------MYB46(3)     --------->ARR11(3)            <---------ANAC58         <--------
----AHL20(2) <------MYB83           <---------ARR11(3)            <---------ANAC58        <---------
 
attttggacttgttgttggttcatgtttggtttatataagattttgagattgttagtggctatttgatggcatgtatcacgaaattagaagttttaacgt  3186000
                                                        ----------->GT1              ------>MYB46(1)
                                                   --------->ATHB12                  -------->P
                  <---------YAB1            --------->CCA1(2)                        ------>MYB83
 <---------MYB52(1)                --------->ALFIN1--------->ATHB51           <---------ATERF1(1)
--TOE2(3)       --------->YAB1     <---------ANAC58<---------AHL20(2)  --------->ARR11(3)  ---------
--TOE1(3)   <----------DOF2        <---------ANAC58--------->AHL20(2)  <---------AHL20(1)---------->DOF2
---GT1      <---------DAG2----------->GT1  --------->ARR14(2)  --------->AHL20(2)   ------>ZmHOX2a(1)
--GT1    <-----------GT1---------->DOF2    <---------ARR11(3)  <---------AHL20(2)  <---------MYB111(2)
 
ttctcttagttttcacttttcatgatataaagaaaaatgtgtgcgagatatgaattatttggataattaactaatatactgggcctcctaccaaaagaaa  3186100
                                                                                            <-------
                                                                                            <-------
                                                                                   <---------ANAC58
                                                                                   <---------ANAC46
                                                                            <---------At4g35610 ----
                                                                          <-----------RAV1(2)  <----
                                                                          ==========================
                                                                          ---------->CDC5  ---------
                                                                          ==========================
     <---------AHL20(1)                       <---------At4g35610        <------NtERF2     <--------
     --------->ARR11(3)                     <---------ANAC58   <---------YAB1      <---------ANAC58
-->GT1         <------NtERF2                <---------ANAC58  --------->TOE2(3) <---------MYB52(1)
 
aaaactaatatactgggcctcaaggctctcaatacattcttgttttttcgtctgccatttcatttcattaatgggcctcagccgtttcgttcattttaat  3186200
                        <---------ANAC46
                       --------->LBD16
                       ------>NtERF2
                      --------->RAP2.6(2)
                    <---------At4g35610
                <-----------TGA1
               --------->TGA1a
               --------->O2
               --------->ANAC46
             --------->O2
             --------->ANAC58
             <---------TGA1a
             --------->TGA1a
             <---------O2
  <-----------HVH21 --------->At4g35610
  <-----------TGA1  --------->ZAT2
 --------->O2--------->ANAC55(2)
 --------->TGA1a<-----------HVH21
 ======================bZIP_bZIP
 --------->bZIP60(2)<---------ZAT2
--AHL20(2)----------->HVH21 <---------CCA1(2)
--YAB1    <---------REM1(2)<---------ARR14(2)
------->HVH21--------->ANAC58
-----WOX13(1)<---------ANAC55(2)                       --------->ANAC46                            -
===========MYC_MYB<-----------RAV1(2)               --------->ANAC46                          <-----
>AHL20(2)<-----------HVH21 --------->ARR14(2)     <-----------GT1<---------ZAT14             <------
=======================MYC_MYB            <-----------GT1---------->CDC5                     <------
-AHL20(2)<-----------TGA1 <---------CCA1(2) <---------YAB1       --------->SPL7         --------->MYB52(1)
 
tgacgcgtcagtcgtcacgcgtcagccgcgtatatcatcttaaaattacgatttcacccctcaacgcgtacagagctaattcgttcttaactaatggctt  3186300
                                                                  <<<<<<<<<CBP60g
                                                                  <<<<<<<<<SARD1
                                                               --------------->AGL15
                                                              <-----------------AGL1          <<<<<<
                                                          <---------ICU4                 <----------DOF2
    --------->ICU4    --------->ARR11(3)                 --------->ICU4               <-----------GT1
-------->YAB1         <---------ARR11(3)                 <---------YAB1             <-----------GT1
-----DOF2            --------->CCA1(1)      *TSS  --------->AHL20(2)             <---------ICU4
---ANAC58            --------->RVE1(1)<-----------GT1  --------->YAB1            <---------AHL20(2)
---ANAC58  <---------ALFIN1     <---------At4g35610   <---------YAB1             --------->AHL20(2)
 
catcgtaataatccaaaccccaaaatatctgacttagctaatttccttcttcattatatcataattccaaatttcgcaaactaattttttcactttcttc  3186400
                                                                             <---------DEAR3(1)
                                                                           <---------RAP2.3(1)
                                                                       <---------MYB52(1)
                                                                       <---------ARR14(2)
                                                                       --------->ARR14(2)          <
                                                                      <-----------HVH21            -
                                                                    <---------TOE2(3)      <--------
                                                                    <---------ANAC46       ---------
                                                                  ------------>AtMYB77  <---------ALFIN1
                                                                  --------->MYB52(1)    --------->AtMYB61
                <---------GLK1(2)                             <---------TOE1(3)<------NtERF2      <-
               --------->HSFC1(2)                             <---------TOE2(3)--------->At5g28300--
               <---------HSFC1(2)                        --------->ANAC58 <---------RAP2.6(2)    ---
            ---------->DOF2                              --------->ANAC46 <---------RAP2.3(2)  -----
     ------>ZmHOX2a(2)                                   --------->ANAC58<---------At5g28300   =====
   --------->ARR11(3)                                  ---------->DOF2<-------GAMYB     --------->DEAR3(1)
   <---------ARR11(3)     <<<<<<<<<TBF1           ------>ZmHOX2a(1) <---------TOE1(3)  --------->MYB46(3)
<<<TBF1   ----------->HVH21                      --------->ANAC46<---------ARR14(2)  --------->ANAC46
 
ttcgttgatctctctgaaagcttctcttcttcttctcaccatgtctggttatcctccatcaagccaaggttacggttacggcggtaatccaccacctcct  3186500
                ------->GAMYB
               --------->DEAR3(2)                                         ===================HOX2a_HOX2a
           <------ZmHOX2a(2)                                              <------ZmHOX2a(2)
       --------->ANAC58                        --------->LBD16           <---------ARR14(2)
      --------->SPL7                          --------->ANAC46           --------->ARR14(2)
      --------->SPL1(2)                      <---------LBD16         --------->SPL1(2)
     --------->MYB52(1)                  ==============================HOX2a_HOX2a
     <---------SPL1(1)                   ========================HOX2a_HOX2a
     --------->SPL1(1)                   <------ZmHOX2a(2)          --------->SPL1(1)
    <---------SPL1(2)                    ===========================HOX2a_HOX2a
    <---------SPL7                   --------->ANAC58               <---------SPL1(1)
  <------NtERF2--------->MYB46(3)    --------->ANAC58              <---------SPL7
 ------>NtERF2--------->MYB52(1)    --------->SPL1(2)              <---------SPL1(2)
 <------------------SPL14           --------->SPL7              =================HOX2a_HOX2a       <
--------->DEAR3(1)                 <---------SPL1(1)            xxxxxxxxxxxxxxxx>smallRNA(s)      --
<---------ALFIN1--------->ATERF1(2)--------->SPL1(1)            <------------------SPL14          <-
------------------>SPL14          <---------SPL7   --------->At4g35610--------->ANAC58        ------
---------MYB55(2)              xxxxxxxxxxxxxxxx>smallRNA(s)    ------------------>SPL14       ------
-------->MYB46(3)              <------------------SPL14      ------>ZmHOX2a(1)  --------->At4g35610-
-ALFIN1--------->ANAC58        ------>ZmHOX2a(1)   <---------At4g35610--------->ANAC58 <---------ALFIN1
>AtMYB61   ===========================HOX2a_HOX2a --------->RAP2.6(2)--------->SPL7   ------>ZmHOX2a(1)
--------At4g35610      <-----------GT1  --------->ARR14(2)   ====================HOX2a_HOX2a  ------
------->At4g35610--------->LBD16  <---------SPL1(2)<------NtERF2------>ZmHOX2a(1)   --------->bZIP60(2)
------>ANAC46 -------->P  ------->GAMYB <---------ARR14(2)------>ZmHOX2a(1)--------->YAB1  <--------
->ZmHOX2a(1)--------->MYB46(3) =================HOX2a_HOX2a <---------ALFIN1 --------->At4g35610  --
==================HOX2a_HOX2a ------------------>SPL14    =======================HOX2a_HOX2a -------
 
cagccaccgtacggatcaaccggcaataaccctcctccgtacggatcatccggcagcaatcctcctcctccgtacggatcatcagcctcctcaccgtacg  3186600
                                            <---------ALFIN1
                                           <---------ZAT2
             ---------->CDC5               --------->At4g35610
          <---------GLK1(1)                <---------ABI4(2)
          --------->At4g35610  <---------ZAT14
          --------->ZAT2 --------->MYB52(1)<---------At4g35610
      --------->ANAC46  --------------------->WRI1
     --------->SPL7     <---------SPL7 <-----------TGA1
   <---------SPL7  <------NtERF2   --------->DEAR3(1)
<---------ZAT18    <---------At4g35610 <-----------HVH21                                           -
---------ARR14(2) --------->ANAC58 <---------ALFIN1                                                -
------->GLK1(1)--------->ZAT2  <---------ZAT18                                  --------->RAP2.6(2)<
--------At4g35610 --------->ANAC58 --------->AtMYB61   <---------CCA1(2) --------->YAB1            -
--->ANAC58<---------At4g35610  --------->ZAT14    --------->SPL7 <------ZmHOX2a(1)          <-------
--->ANAC58--------->GLK1(1)    --------->ZAT18  <---------SPL7 --------->LBD16  --------->DEAR3(1) <
-------->ARR14(2) <---------ATERF1(1) --------->DEAR3(1)      <---------LBD16--------->ANAC46    ---
--->ANAC46<---------ZAT2------>ZmHOX2a(1)  --------->ZAT2     --------->HSFB2a(2)    ===============
-SPL7<---------LBD16<---------ALFIN1  --------->DREB2C(2)     <-----------RAV1(2)    ---------->DOF2
------->At4g35610<---------ZAT18  --------->MYB46(3) --------->ANAC46   <---------YAB1      --------
-->SPL7  <-----------ARR10--------->SPL7<---------MYB52(1)    <---------HSFB2a(2)--------->LBD16----
 
cagttccctacggagctcagcccgctccttacggtgcaccaccgtcagcaccgtacgcgtctcttccaggagaccataataagccgcacaaagagaaacc  3186700
                                                                                            --------
                                                                                            <-------
                                                                                            <-------
               <---------GLK1(1)                                                         <---------At4g35610
              --------->ARR11(3)                                                         --------->At4g35610
         =============HOX2a_HOX2a                                                        --------->LBD16
         ==============HOX2a_HOX2a                                                       ------>NtERF2
         ------>ZmHOX2a(1)                                                               <------NtERF2
      ------>NtERF2                                                                     --------->RRTF1(2)
     --------->DEAR3(1)                                                                 --------->RRTF1(3)
    --------->ATERF1(1)                                                                 ----------->RAV1(1)
    --------->RAP2.3(1)                                                                 --------->RAP2.3(3)
    --------->ORA47(2)                                                                  --------->DEAR3(1)
    --------->DEAR4(2)                                                                 --------->ATERF1(1)
    <------NtERF2                                                                      --------->RAP2.6(1)
   ------>NtERF2------>ZmHOX2a(2)                                                      --------->RRTF1(1)
   --------->ABI4(2)                                                                   --------->RAP2.3(1)
   <---------ATERF1(1)                                                                 <------NtERF2
   <---------RAP2.3(1)                                                               <---------DEAR3(1)
  --------->DEAR3(1)          <---------ATERF1(1)                                   <---------ABI4(2)
  <---------DEAR3(1)          ------>NtERF2                                       --------->ATERF1(1)
 --------->RAP2.3(1)          <---------MYB46(3)                                --------->ALFIN1
<---------ATERF1(1)         <---------MYB52(1)                               <---------ANAC46
-------->ANAC46<------ZmHOX2a(2)                                             <---------ANAC55(2)
-------->TGA1a------->TEIL--------->LBD16                                 --------->ARR14(2)--------
---------O2   <---------ARR14(2)                                          <---------ARR14(2)--------
-------->O2   <-----------ARR10<------NtERF2                ------>MYB46(1) <---------LBD16---------
--ARR14(2) --------->ANAC46--------->LBD16                  ------>MYB83 <-------GAMYB<---------ATERF1(1)
---------TGA1a--------->ARR14(2)                        ------->TEIL   --------->ALFIN1--------->DEAR4(2)
------>MYB52(1)--------->GLK1(1)                     --------->HSFB2a(2)--------->MYB55(2)<---------
=========bZIP_DOF       <---------LBD16            ----------->RAV1(2)<---------MYB52(1)--------->RAP2.3(2)
->ARR14(2)<---------LBD16<---------LBD16     --------->MYB46(3)    <---------ZAT14<------ZmHOX2a(1)
------->HVH21 <---------ARR11(3)   <---------DEAR3(1)<---------HSFB2a(2)<---------MYB46(3)<------NtERF2
 
tcacggcgcctcctacggatctccatctcccggtggctacggtgctcatccatcgtctggaccttccgactacggtggttacggaggagcgccgcagcag  3186800
<- Previous    Next ->

AGI:  At3g10300.1   
Description:  calcium-binding EF hand family protein. similar to calcium-binding EF hand family protein [Arabidopsis thaliana] (TAIR:AT5G04170.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23637.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048)
Range:  from: 3186345    to: 3187399    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

    printer-friendly version