Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       ------>MYB83                                        <------------CBF                     ------>MYB46(1)                                   <---------AHL20(2)                   ------->GAMYB                                       --------->AHL20(2)                   --------->AtMYB61                                --------->YAB1                   <---------MYB59                                 <---------YAB1                  --------->MYB46(3)                             --------->YAB1                 ------>MYB83 --------->AHL20(2)                 <---------ICU4                 --------->ANAC58       ------>NtERF2           <---------YAB1          <---------TOE2(3) ----------->CBF -------->P <---------AHL20(2)                  --------->ICU4       <---------YAB1 ---->ANAC46     ------>MYB46(1)       --------->ANAC58       --------->YAB1        --------->TOE2(3) -----GT1        --------->ANAC58      --------->ANAC58      <---------YAB1----------->GT1 -->ANAC46   --------->HSFB2a(2)       --------->ANAC46      --------->ICU4--------->YAB1   cagacaatcgcgcttccccaaccaaactattttaaaatactacgccttgttgaagtttgaactatgattatgataaattgtaatttcattaatgtttcaa  3154900                             --------->ANAC46                            ------->TEIL                            <-------TEIL                        <---------------AtSPL8                        --------------->AtSPL8                        <---------------AtSPL3                       <---------ICU4            ----------->GT1                                   <-                    --------->YAB1             ---------->DOF2                                  -----                 ----------->GT1          ---------->DOF2                            ---------->DOF2     <---------GLK1(1)--------->ICU4 ---------->DOF2            ----------->GT1    --------->MYB46(3)   agtttggatatttgttcaagtgtaataatgtacgtctcagaaagaaaagaaaagaaaaacaaggtttggataaatctaacttctaaccaaagcatatgaa  3155000                                                                                                  ---                                                                                                 <---                                                                                                <----                                                                                                -----                                                                                                -----                            <---------TOE2(3)                                                  ------                         <---------WOX13(1)                                                 ---------                       --------->ATHB12                                                <-------------                 <---------ICU4                                                        --------------                --------->ICU4<------ZmHOX2a(1)                                       ---------------     <---------YAB1   <---------YAB1    ----------->GT1                           <---------AHL20(2) --------YAB1<---------AHL20(2)       ------->TEIL                            --------->AHL20(2)<---- -->TEIL     --------->AHL20(2)    <---------YAB1                             <---------AHL20(2)<----   tatgtttgtaattgtttaattagtatgattgaggattatgaatcgataaactttagaatacatatattcaatgtttgcatataatttatccaaaaaaaga  3155100        --------->ANAC55(2)        --------->ANAC58        --------->bZIP60(2)        --------->ANAC55(1) --->ZmHOX2a(2)                                                                                    <- ---ZmHOX2a(2)                                                                           --------->TOE1(3) -----GLK1(2)                                                                            --------->TOE2(3) ---->ARR14(2)                                                                          <----------ID1 ---->ARR11(3)                                                                         <---------TOE2(3) --->RVE1(1) <---------MYB52(2)                                         --------->AHL20(2)   -------- ->DOF2 --------->ANAC58                   <---------MYB52(1)    --------->ZAT6       --------->MYB52(1) --AGL15----------->GT1                   <-------GAMYB     ----------->GT1      --------->AHL20(2)<- ->AGL15--------->ANAC46                 ----------->GT1    <---------ZAT6   <---------AHL20(2)   <-- -->AGL3<---------ANAC55(2)         <---------DAG2        <---------ZAT14   --------->AHL20(2)    --- -----ARR11(3)                      <----------DOF2       <-------TEIL  <---------AHL20(2)  --------- -----ARR14(2) ---------->DOF2    <---------TOE1(2)       --------->ZAT14   <---------AHL20(2)-------   tccttgaaacacgtaactaaagacaactaaaactcgtacttttcggttaatctaactaagtacagttacactaaaaaaataaatgaaataacgataaagt  3155200                        <------------CBF                    --------->ANAC46                   --------->LBD16             <---------HSFC1(2)                                                                    <-     <---------ANAC46<------ZmHOX2a(1)                                                             -- --------TOE2(3)  <---------LBD16                                 <-----------TBP                 --- ->DAG2      --------->HSFC1(2)                                   <---------AHL20(2)           ------ --------TOE1(3)  --------->HSFB2a(2)                             --------->AHL20(2)           <----- -------DOF5.7(2) <---------HSFB2a(2)                           <-----------TBP               ------- ------->DOF2<---------HSFB2a(1)  ----------->GT1          --------->ANAC46      <----------DOF2----- ->DOF2      --------->HSFB2a(1)  <---------ANAC55(2)<-----------GT1             <---------DAG2------ ---->GT1 <------ZmHOX2a(1) ------------>CBF         --------->ZAT6 ----------->TBP           <------   taaagttgagtaggaaacttccaggaaattgccaataggtaaactctcacacttatcactccccccatttatatatgtcttcactttctccatcaaatca  3155300                                                                >>>>>>>>>>>>>>>>>LFY      --------->ZAT6                                         <---------HSFB2a(1)      --------->ANAC46                                       ------>ZmHOX2a(2)    <-----------GT1                                          --------->HSFB2a(1)   *TSS                                                     <------ZmHOX2a(2) --------AHL20(2)                                          <---------ARR11(3) ------->AHL20(2)                                          --------->ARR11(3) ------>AHL20(2)                                       ---------->DOF2                            <-- --->ATHB12                                         <------ZmHOX2a(2)                     <----------DOF2 ----ICU4         --------->ANAC58                 --------->ARR14(2)                     <---------DAG2 -->ICU4          --------->ANAC58                 --------->AGP1                     --------->ANAC58 ---->TOE2(3)     --------->ANAC46                 <---------ARR14(2)                 --------->ANAC58 --->YAB1     ------->TEIL                        --------->At4g35610                 --------->ANAC46 ---ATHB12 <---------YAB1                      <---------At4g35610                  <---------ALFIN1   ttaaattcacactatgaaactcgccaaactaattccaaaacgtttcttcatcagatccaaagatcgttccactgtctctaagtcccccacggctttttcc  3155400                                                                   <---------MYB52(1)                                                                   --------->DOF5.7(2)                                                                  <-------GAMYB                                                                  <-----------HVH21                                                                 --------->ANAC55(2)                                                                 <---------ANAC58                                                                 <---------ANAC55(2)                                                              --------->ARR14(2)                                                            <---------DEAR3(2)                                                           <---------ANAC58                                                           <---------RAP2.6(2)                                                           <---------DEAR3(1)                                                           <---------ANAC46                                                           <---------ANAC58                                                          <------NtERF2                                                         ------------>AtMYB77                                                        --------->ALFIN1                                                        <---------DEAR3(1)                                                        ----------->HVH21                                                        <---------AtMYB61                                                       <------NtERF2                                                       --------->ATERF1(1)                                                       <-------GAMYB                                                      <---------MYB46(3)                                                      <---------ATERF1(1)                     -------                                                      <---------RAP2.3(1)                     <------                   <---------LBD16                   <---------DREB2C(2)                    ---------               <---------At4g35610                   <---------ANAC46                       ---------            ------>ZmHOX2a(1)                        <---------DEAR3(1)                     <--------      --------->At4g35610                   --------->ALFIN1<---------MYB46(3)              <--------    ------>ZmHOX2a(2)                       <---------DEAR3(1)<---------ARR14(2)            <--------    ===============HOX2a_HOX2a --------->At5g28300   <---------RAP2.6(2)                 --------->LBD16   ================HOX2a_HOX2a----------->GT1<---------MYB46(3)  <---------ANAC58       --------->LBD16   <------ZmHOX2a(2)  ------>NtERF2         <---------AtMYB61--------->ATERF1(1)        <---------HSFB2a(2)  --------->ARR14(2) --------->LBD16       <---------MYB52(1)<-------GAMYB            <---------LBD16  <---------ARR14(2) ------>NtERF2        --------->LBD16------>NtERF2    ------>NtERF2<---------LBD16 -------LBD16  --------->At4g35610      <---------LBD16<---------ABI4(1) --------->LBD16--------->HSFB2a(2)   ttcggatccgcttcctcatcttccggccaagactgtaaaaactccggtggtgatggcggtggcggttccgttaccccgactagcattctcccggaggttc  3155500                                                                                                    <                                                                                           --------->MYB52(2)                                                                                         <---------MYB52(1)                                                                                =====================                                                                                ------>ZmHOX2a(2)   <                                                                               ======================                                                                               <------ZmHOX2a(2)   <-                                                                              <---------ARR11(3)   --                    <---------ARR14(2)                                        --------->ARR11(3)  ---    ------>ZmHOX2a(1)--------->GLK1(2)                        <---------At4g35610      ----------->GT1 -->ARR14(2)        <---------GLK1(2)                         --------->ZAT2  <---------ARR14(2)  --- ---ARR14(2)        --------->ARR14(2)                        --------->At4g35610      <---------MYB46(3) >HSFB2a(1)       ----------->ARR10                      <---------LBD16      <---------ARR14(3)  <-- >HSFC1(2)  --------->SPL7                              ------->GAMYB         --------->ARR14(2)  <-- -HSFB2a(1)------>ZmHOX2a(1)                           --------->MYB46(3)     --------->ARR14(3) <--- -MYB46(3)--------->TOE1(2)                          --------->MYB52(1)     --------->ANAC58<-------- -HSFC1(2)--------->TOE2(2)               <---------WOX13(1)  <---------ZAT2--------->ANAC58<--------   cttctccttattcctacgtcgagattctccaagcgtttaagttgatagacagagacaacgacggagctgtctctagacacgatcttgagtcgttacttag  3155600                                                                            <---------ARR14(2)                                                                            --------->ARR14(2)                                                                          ----------->ARR10                                                                         --------->SPL7                                                                    <------NtERF2               ------>ZmHOX2a(1)                                   ------>NtERF2               <----------DOF2                                     <---------ATERF1(1)    <------MYB83                                                  ----------->HVH21    <------MYB46(1)                                               --------->DEAR3(1)   --------->MYB59              <------ZmHOX2a(2)                 <---------DEAR3(1) ------NtERF2------>ZmHOX2a(2) <---------ARR11(3)                <------NtERF2 ===============HOX2a_HOX2a    --------->ARR11(3)                --------->ATERF1(1) ---------ZAT2 ========================HOX2a_HOX2a               --------->RAP2.3(1) ===============HOX2a_HOX2a   --------->GLK1(1)                 ------>NtERF2 ------>ZmHOX2a(2) --------RAP2.6(3)       <------ZmHOX2a(1)                      <---------RAP2.3(1)                 < ---->NtERF2 ===================HOX2a_HOX2a                     <---------ATERF1(1)                 < ------>ATERF1(2)        ==============HOX2a_HOX2a             --------->DEAR3(1)                   < ------>RAP2.6(2)  <---------LBD16       <---------YAB1        <---------DEAR3(1)              <----- -------ATERF1(2)----------->HVH21    <---------MYB52(1)      --------->ATERF1(1)          <---------ANAC58 -------RAP2.6(2)--------->WRKY12  <---------TOE2(3)        ----------->HVH21<------ZmHOX2a(2) <----- ------LBD16 ======================HOX2a_HOX2a        --------->ZAT18  <---------SPL7      <---------ANAC58 -ANAC58 ------>ZmHOX2a(1)  <------ZmHOX2a(1) ---------->DOF2<---------ATERF1(1)         --------->ARR11(3) -ANAC58 ==============================HOX2a_HOX2a   --------->ALFIN1 <---------DEAR3(2) <---------ARR11(3)   ccggctaggtcctgatcctttgacggaggaggagatcaacgttatgcttaaagaggtggactgcgacggcgacggtacgatccgtcttgaagagcttgcg  3155700                        =====================================bZIP_DOF                        --------->TGA1a                        =====================================bZIP_DOF                        <---------TGA1a                  ==================================HOX2a_HOX2a                  ------>ZmHOX2a(2)                 --------->CCA1(2)                 --------->ARR14(1)                                       ----------->TGA1                 ===================================HOX2a_HOX2a           ----------->HVH21                 <------ZmHOX2a(2)                                      ------>ZmHOX2a(2)                --------->ARR14(2)                <----------DOF2      <------ZmHOX2a(2)                <---------ARR14(2)           <------ZmHOX2a(1)        --------->ARR14(2)              ----------->ARR10         ----------->HVH21             <---------ARR14(2)     <-------   --------->ZAT14<---------LBD16     --------->ZAT2              <---------LBD16           <--------   --------->REM1(2)--------->LBD16   <---------ZAT2             <---------ANAC46     ------>ZmHOX2a(2) ---------ANAC46--------->AGP1        <---------At4g35610     ----------->HVH21     --------->ARR11(3) ---------ANAC58--------->ARR11(3)    --------->At4g35610   <----------DOF2  <---------ANAC46-------- ---------ANAC58--------->ARR11(1)  <---------ZAT14      <---------ARR11(3)------------>AtMYB77 ----ANAC58<----------DOF2----------->HVH21  =================================HOX2a_HOX2a --------->At4g35610 ----ANAC58=======================bZIP_DOF   ==================================HOX2a_HOX2a<---------At4g35610   agtcgtgtagtctctttagatccggctcgtgactcgactgagctgaaggagactttcgagttctttgacgcggatcgtgacggtttgatctcggctgatg  3155800  Previous    Next  AGI:  At3g10190.1    Description:  calmodulin, putative. similar to calmodulin, putative [Arabidopsis thaliana] (TAIR:AT2G41410.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23336.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) Range:  from: 3155303    to: 3156148    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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