Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            --------->TGA2(2)                         <-----------HVH21                         <-----------TGA1                        --------->ANAC58                        <---------O2                        <---------bZIP60(1)                        --------->TGA1a                        --------->ANAC58                        <---------TGA1a                        --------->bZIP60(1)                        --------->bZIP60(2)                        --------->O2                                                            -----                        --------->ANAC46                                                       ------                        --------->ANAC55(2)                                                   <------                        <---------ANAC55(2)                                                  ========                       <-----------STF1                                                      <-------                       ------>NtERF2                                                         ------>ZmHOX2a(2)                       <-----------bZIP910(1)                        ------>ZmHOX2a(2)      <------ZmHOX2a(2)                      <---------ALFIN1                              --------->GLK1(1)       =========                    <-----------HVH21                               <------ZmHOX2a(2)      --------->ARR14(2)                   --------->ANAC58                                 <---------GLK1(1)      <---------ARR14(2)                   --------->ANAC46                                <-----------ARR10       --------->TCP20                   --------->ANAC58                                --------->ARR11(3)    <---------MYB46(3)                   ===============MYC_MYB                          --------->ARR14(2)    --------->ABI4(2)                   ------->GAMYB                                   <---------ARR14(2)   --------->ALFIN1                   --------->RAP2.6(2)                             <---------ARR11(3)<---------ATERF1(2)                   --------->DREB2C(2)                            ==================================HOX2a_HOX2a                  --------->DEAR3(2)                              <------ZmHOX2a(1)  <---------DEAR3(1)                  --------->MYB46(3)                           --------->YAB1       <---------LBD16<-                  ================MYC_MYB                     --------->ICU4  --------->MYB46(3)<----                  <---------MYB55(2)                       --------->ICU4==========================HOX2a_HOX2a    <----------DOF2--------->DEAR3(1)                   ---------->ID1   ===========================HOX2a_HOX2a    ==============================bZIP_DOF           ======================HOX2a_HOX2a<---------DEAR3(2) ------>AtMYB61   <------------AtMYB77               ------>ZmHOX2a(1)   ------>ZmHOX2a(1) --------->TCP16(1) ----ALFIN1     <---------ALFIN1             ----------->RAV1(2)  =================================HOX2a_HOX2a >AtMYB61  --------->ANAC58                  <---------At4g35610--------->MYB59   --------->DEAR3(1)- >TOE2(3)  --------->ANAC58      <---------ALFIN1    =======================HOX2a_HOX2a<---------MYB52(1)   cctctcctttcacaagctcaaccgccacgtcatcaccactcttcttcacctgttcctcgtcgtaattaggatctccttcatccatcgccggtggatccgg  3091400                                     <-------MYC3                                     <-------PIF5                                     <-------MYC4                                     ------->MYC4                                     ------->PIF5        ----------->HVH21                                     ------->MYC2       <---------MYB59                                     <-------MYC2 <---------TGA1a                                     ------->MYC3 --------->O2                                    ========================bZIP_bZIP                                    <---------TGA1a    <---------At4g35610                                    <---------O2  <---------O2     --------->ANAC55(2)            --------->TGA1a<-----------HVH21     <---------ANAC55(2)            --------->O2 <------NtERF2 ------->TEIL                       <---------ANAC46<---------MYB52(1)             <------ZmHOX2a(1) ---->At4g35610                    <---------TOE1(2)----------->HVH21    <---------DEAR3(1) --->LBD16               xxxxxxxxxxxxxxxx>smallRNA(s)  --------->At4g35610 ----------->RAV1(2) ---RAP2.6(2)         ===============HOX2a_HOX2a--------->LBD16         --------->ATERF1(1) ===================HOX2a_HOX2a   <---------ALFIN1--------->TGA1a      <-----------HVH21 --LBD16     ------>ZmHOX2a(1)------>ZmHOX2a(1) ------>NtERF2         <---------MYB46(3) ===================HOX2a_HOX2a   <------------OsbHLH66<---------bZIP60(2) <------NtERF2          === -----NtERF2 ================HOX2a_HOX2a       --------->ANAC46      <---------AtMYB61            <-- -----At4g35610       <------ZmHOX2a(2)       <---------LBD16     <---------AtMYB61================== -------->REM1(1)    <-----------HVH21   ------->TEIL  <---------O2<---------MYB46(3)--------->GLK1(1)   ctgcatctcgtaatcctccatccgatcaggtccttcccacgtgtacttcccgccgtgacctgacttcgatggtggtcgcctgagaggaatcccatcggaa  3091500                                               ------->GAMYB         <---------ANAC58                      <---------DAG2       <---------WRKY38(1)       <---------ANAC55(1)               --------->WRKY12            <---------WRKY12          <---------bZIP60(2)              <---------MYB52(1)           ---------->CDC5           <---------ANAC58      <------ZmHOX2a(2)                  --------->ANAC46            <---------ANAC55(2)     <---------ARR14(2)                 --------->At4g35610          <---------ANAC46             ---     --------->ARR14(2)<----------DOF2  <---------At4g35610          --------->ANAC55(2)          <-- ============HOX2a_HOX2a          <---------HSFC1(2)           --------->LBD16                   ---- ----ZmHOX2a(1)--------->WRKY38(1)--------->HSFC1(2)         <---------LBD16                     <--- ============HOX2a_HOX2a          --------->At4g35610   ------>ZmHOX2a(2)                        <---   ggatgacgatccatccgttgaacacctttctccataagcttccgctcaacgctcttgatcgtctccggattacgtgtcttcacttcgaacttatcaacag  3091600                                     --------->AtMYB61                                     <---------ALFIN1    ------>NtERF2                    --------->DEAR3(1)   --------->LBD16                  --------->MYB46(3)                                            ---   ------>NtERF2                    <---------ABI4(2)                                         -------  <---------RAP2.6(2)         --------->LBD16                                                <------- <---------LBD16          ------>NtERF2                                                      -------- ------>GLK1(1)          <---------ALFIN1                                 ------->TEIL ----------->GT1 -------GLK1(1)          --------->DEAR3(1)                          ----------->RAV1(2)    --------- ----->ARR14(2)         --------->ATERF1(1)                         ------>NtERF2 --------->CCA1(2) ------GLK1(2)<---------YAB1 --------->ANAC46              --------->At4g35610   <---------ARR11(3) ------ARR14(2)        <---------ATERF1(1)                 <---------At4g35610   --------->ARR11(3)   atttccggccttcttcattcttgtgctccgcccgtagcaccaccgtgtttttggtttcatcaactgataccgcctgcatcttagatatacagaaataaat  3091700                                  <---------AHL20(2)                                      --------->ALFIN1                                  --------->AHL20(2)                                    <---------ANAC46   ----------->GT1            <---------ANAC58                                          <---------ANAC58 ------->DOF2          <---------TOE1(2)                                                <---------ANAC58 -->WOX13(1)           ------->TEIL   --------->YAB1                     --------->ALFIN1<-----------HVH21 --AHL20(2)        <---------------AtSPL3                              *TSS<---------ANAC46 ->AHL20(2) <---------ZAT14   <---------ANAC46               <----------DOF2           <-------TEIL >AHL20(2)  --------->ZAT14   <---------ANAC58  ---------->DOF2--------->AHL20(2)     --------->ALFIN1   caaagtcgtgatacttcactacttgtacgtttgcgtttaattagaatgagcaaagagtgttttctttatataagagtgtgtgtaagaggtgcgtgagggg  3091800                                                                           <---------HSFB2a(1)                                                                           --------->HSFC1(2)                                                                           --------->HSFB2a(1)                                                                      <---------HSFB2a(2)                                                                      --------->ANAC58                                                                      --------->HSFB2a(2)                                                                      --------->ANAC58                                                                      --------->ANAC55(2)                                                                      <---------ANAC55(2)                                                                     <---------LBD16                                                                   <---------SPL7                                                                 <---------At4g35610                    <---------ARR11(3)                           --------->At4g35610                    --------->ARR11(3)                          <---------TOE1(2)                   --------->CCA1(1)                           <---------CCA1(2)                   --------->RVE1(1)                        --------->HSFB2a(2)          <----------ID1                                    <---------HSFB2a(2)          <---------AHL20(2)        <---------------AtSPL8                          <----------DOF2    <---------HSFC1(2)       <      --------->CCA1(2)                               ---------->ID1--------->MYB52(1)  <---------AHL20(2)     --------->ARR14(2)      <------------CBF     <---------ANAC58<---------ANAC58   <---------AHL20(2)     <---------ARR14(2) --------->At4g35610       <---------ANAC58<---------ANAC58   --------->AHL20(2)   ataagaagataggggacaaaaatatctgatgaattgaagtttctagcgactaccttgtctttctcgtagcttacggaaacttctcatttttttatttgag  3091900           <-----------GT1      <---------YAB1                  <------MYB46(1)                  ----         --------->ICU4       --------------->AGL15             <------MYB83                    -----      --------->AHL20(2)      <---------------AGL15            --------->MYB59                  <----    <---------ANAC55(2)      <-----------------AGL3          <---------MYB52(1)               -------    --------->ANAC58         <-----------------AGL2  <---------YAB1                           <------    ----------->GT1          <-----------------AGL1 --------->AHL20(2)                     --------->ANAC46    --------->ANAC55(2)      --------->ZAT6         <---------AHL20(2)               <---------MYB46(3)    --------->ANAC58     <-------GAMYB    <----------DOF2  <---------ZAT6      --------->ANAC55(2) -----------HVH21       --------->ALFIN1 <----------DOF2<-----------GT1        <---------ANAC55(2)  -   tctgtcaagtaattatccattcgagggtgttactctaattgggcctttgtgtatttttatactgttcggtccccatacattacatgtttgttcacatcat  3092000                                                                                    --------->WOX13(1)                                                                                   <---------ICU4 ----->ATHB12                                           <---------ICU4             --------->YAB1 ---->ICU4                                          ---------->DOF2                -------->ATHB1 -----YAB1                                        <---------YAB1        --------->TOE2(3) -->YAB1                  --------->ARR11(3)    <---------ZAT6         --------->YAB1     ---------->DOF2 ---ICU4  <---------YAB1  <---------GLK1(2)--------->YAB1              ----------->GT1 --------->YAB1 ----->ZmHOX2a(2)         <---------ARR11(3)  --------->YAB1     --------->YAB1   <---------ATHB12   gatcggattattttgatactcagcaatagattttgacatttgctctaatagtattaaagcattacaaacaaaatcgtaaatacaatcattcagaaagaag  3092100                                     ------->MYC3                                     <-------MYC3                   ===========================bZIP_DOF                   ---------->DOF2  --------->O2      <---------DOF5.7(2)           <---------TGA1a      --------->MYB52(1)            <---------O2     <---------WRKY38(1)   --------->RVE1(1)                                                       <-     <---------WRKY45     --------->GLK1(2)             <-----------GT1                         <----     <---------WRKY12     --------->ARR11(3) <---------ARR11(3)                                 <----    --------->WRKY18(1)   <---------ARR11(3) --------->ARR11(3)            <---------AtLEC2<---------  --------->WOX13(1) ----------->GT1--------->TGA1a  <---------ICU4      <---------YAB1    <---------DAG2   aagtcagtcaacgaagatggagaaagaaaatctctcaaacgtgtcaacatcttcaatattacaacgtcttcacttgtgaatggagcaactctcctttttc  3092200                              --------->LBD16                              ----------->GT1                             --------->HSFB2a(2)                             <---------HSFB2a(2)                             <---------ANAC55(2)                             --------->ANAC55(2)                             --------->ANAC58                             --------->ANAC58                            <---------LBD16                           --------->MYB52(1)                         <---------ANAC58                         <---------ANAC58                       <---------AHL20(2)                    <---------ICU4                   --------->AHL20(2)                   <---------YAB1                   <---------AHL20(2)   <---------At4g35610 --------->AHL20(2)                                                       <---- ----------HVH21  --------->AHL20(2)                                                  --------->ANAC58 -----ANAC58      --------->AHL20(1)              ---------->DOF2                     --------->ANAC46 -----ANAC58      <---------AHL20(1)      <-------MYC3     <---------YAB1             --------->ANAC58 -DOF2           --------->YAB1           ------->MYC3<---------ZAT6              <---------MYB52(2)   ttgtcaactcatctatgaaatataattacttacggaaaaaacaacgtgtttacaaagtgttatgaattcacacatatactactaactcacgccccttccg  3092300  Previous    Next  AGI:  At3g10020.1    Description:  similar to Os12g0147200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066153.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15981.1); similar to Os11g0149200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065754.1) Range:  from: 3091048    to: 3091771    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g10030.1    Description:  aspartate/glutamate/uridylate kinase family protein. similar to aspartate/glutamate/uridylate kinase family protein [Arabidopsis thaliana] (TAIR:AT3G18680.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15999.1); contains InterPro domain Aspartate/glutamate/uridylate kinase; (InterPro:IPR001048); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005) Range:  from: 3092028    to: 3094950    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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