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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                           ---------
                                                                                           <--------
                                                                                    --------->YAB1
         <---------YAB1                                                            <-------TEIL
        --------->TOE2(3)                                                      --------->ICU4     <-
--------GT1  <-----------GT1                                                --------->AHL20(2)    <-
-ANAC46<---------ICU4                                                     ----------->GT1  ---------
-ANAC58<--------HAHB4                 <---------TOE2(3)                 ---------->DOF2    ---------
-ANAC58--------->ATHB12    --------->AHL20(2)--------->TOE2(3)         <---------WRKY45<---------ICU4
 
tactactgcatcattaaaaccagtttgcaaatatatgttctgaggtaatctcaaactcaactaagaaaacatagtcaaagtaaatattcatcagtacagc  3076500
                                                                 --------->CCA1(2)
                                                                --------->ARR11(3)
                                                                <---------ARR11(3)
                                                           --------->LBD16
                     --------->AHL20(2)                   <-----------RAV1(2)
->DOF2              <---------ARR11(3)                 --------->ANAC58                     <-------
-ZAT14              --------->ARR11(3)                 --------->ANAC58                   --------->AtLEC2
--------DAG2        <---------AHL20(1)             --------->ANAC46                    --------->WRKY18(1)
---------DOF2<---------ZAT6               XXXXXXXXXXXXXXXXXXXX>MIR4239         <---------AHL20(2)
>SPL7      <---------At5g28300         --------->AHL20(1)<---------LBD16      --------->AHL20(2) <--
>ZAT14    <-----------GT1         --------->AHL20(2)   --------->ANAC46    --------->AHL20(2)    <--
 
ccttttttgttttttactgtgaatatatatagttcaagaaaatatgttatctacacataccccagaagatttaagagtttatataatacagtcatgcatg  3076600
                                                     --------->LBD16
                                                   ------>ZmHOX2a(2)
                                                  <------ZmHOX2a(2)
                                                 --------->ARR14(2)
                                                 <---------ARR14(2)
                                               ----------->ARR10
                                               --------->ANAC58
                                          --------->ANAC46
    <-----------HVH21                     <---------bZIP60(1)
    <-----------TGA1                    >>>>>>>>>WRKY18                                    <--------
--AtLEC2  --------->ZAT14            <------------CBF------>NtERF2                        <---------DAG2
-------PCF5                    <----------DOF2 --------->ANAC58                        <-----------GT1
-------PCF2               <----------DOF2 --------->bZIP60(1)               <------ZmHOX2a(2)    <--
 
ggaccatcgtcactgtagcttaaattcaactttccttttacattgacgacacgatccgcctctatcgctctctcactcgatccctctattcaaccttttc  3076700
                                 <---------AHL20(2)
                      <---------AHL20(2)
                      --------->AHL20(2)
                     <---------AHL20(1)
                     --------->AHL20(2)
                  --------->AHL20(1)
                  <---------AHL20(2)                            <-----------GT1
                  --------->AHL20(2)                      ----------->GT1
                 <---------AHL20(2)            <---------HSFB2a(2)
    <---------AtMYB61<---------AHL20(2)        --------->HSFB2a(2)
--DOF2    ----------->GT1        --------->AHL20(2)     ---------->DOF2          <---------GLK1(1)
----------CBF    --------->AHL20(2) <-----------GT1  <---------ZAT6              --------->GLK1(1)
 
tattgttttggttttgttaattaaattatttagtatttatttctatttttctagtagtataaagtataaaccttctatcgttggaaatcaaaaacgctcg  3076800
                   --------->AHL20(1)                                             <------ZmHOX2a(2)
                   <---------AHL20(1)                                            --------->ARR11(3)
                   <---------ARR11(3)                                            <---------ARR11(3)
                   --------->ARR11(3)                                            <---------ARR14(2)
              ------------>CBF                                           ------>MYB46(1)
             <-----------GT1          ----------->HVH21                  --------->MYB52(1)    -----
       <---------AtMYB61            ----------------------->TaNAC69(2)   ------>MYB83         ------
     <----------DOF2           <---------ALFIN1                      >>>>>>>>>>MYB80          ------
    <---------ANAC58         <---------ALFIN1                   <-----------ARR10--------->ARR14(2)
    <---------ANAC58        <------NtERF2<---------ANAC46    <---------MYB59    <------ZmHOX2a(1) --
 
aacatttgctttggtttttcaatattttggcctcacactctctgacttgaactcttctcttctaccgaatcaaaccaaatggaggatcatcaaaaccatc  3076900
                                                                           --------->At4g35610
                                                                          --------->ANAC58
                                                                          --------->ANAC58
                                                                     --------->LBD16
                                                                     <---------SPL7               --
                                                                     ----------->HVH21            --
                                                                    --------->DEAR3(1)           ---
  <---------ZAT14                                                  --------->ATERF1(1)          ----
  --------->SPL7                                                   <------NtERF2                <---
  --------->ZAT14                       ------>ZmHOX2a(2)          <---------LBD16              <---
<---------SPL7                         --------->GLK1(1)          ------>NtERF2                 ----
---->MYB46(3)    ------->GAMYB    ------>ZmHOX2a(1)              --------->DEAR3(1)             ----
>MYB83          --------->MYB46(3)--------------------->WRI1    <---------At4g35610             ----
>MYB46(1)    --------->MYB46(3)   <---------At4g35610           --------->At4g35610            -----
------->ANAC46 -------->P         =============HOX2a_HOX2a  <-----------HVH21                <------
 
cacagtacggtatagaacaaccatcttctcaattctcctctgatctcttcggcttcaacctcgtttcagcgccggaccagcaccatcgtcttcatttcac  3077000
                      ------->MYC2
                      ------->MYC3              ----------->GT1
                      <-------PIF5            <---------ANAC58                                    <-
                      <-------MYC3            <---------ANAC46                                  <---
                      <-------MYC2            <---------ANAC58                                  <---
---->MYB83            ------->PIF5           <------NtERF2                                      <---
---->MYB46(1)         ------->MYC4          <---------MYB46(3)                              <-------
------>ORA47(1)       <-------MYC4          --------->MYB55(2)                          <------NtERF2
----->DEAR3(1)       --------->TGA1a        ------>NtERF2                             <---------RAP2.6(2)
------MYB46(2)       <<<<<<<<<<HY5         <---------DEAR3(1)                       <---------MYB46(3)
------MYB55(2)       <---------TGA1a       --------->ALFIN1         --------->YAB1 <---------AtMYB61
----->DREB2C(2)      --------->O2   <---------ANAC58          --------->ZAT6<------ZmHOX2a(2)  <----
----->DEAR4(1)       <---------O2   <---------ANAC58      --------->At5g28300      --------->ALFIN1<
----->MYB46(3)       <---------ANAC46<---------SPL7   ----------->RAV1(1)  <---------ARR14(2)  <----
---->DEAR3(2)        --------->PIF3(3) --------->SPL7 --------->MYB52(1)  ------->GAMYB<---------MYB46(3)
-----GT1             <---------PIF3(3)--------->MYB52(1) ----------->GT1 --------->MYB46(3) --------
 
cgaccatgagataagtttattgccacgtggaatacaagggcttacggtggctggaaacaacagtaacactattacaacgatccagagtggtggctgtgtt  3077100
                        <------NtERF2
                      <---------DEAR3(1)
                      <---------ANAC46                                        ------>ZmHOX2a(2)
                     <---------LBD16  <---------RAP2.6(2)                    --------->GLK1(1)
                     --------->ATERF1(1)                                     <------ZmHOX2a(2)
                     <------NtERF2  <---------bZIP60(2)                     --------->AGP1
                    <---------RAP2.3(1)    <------NtERF2                    <---------AGP1
                    <---------ORA47(2)--------->ALFIN1                      <-----------ARR10
<------MYB83        <---------ATERF1(1) <------NtERF2                       --------->ARR11(3)
<------MYB46(1)    <---------DEAR3(1)--------->ATERF1(1)                    <---------ARR14(2)
--------ANAC46    <---------ORA47(1)<---------ZAT2                          --------->ARR14(2)
------MYB46(3)  <---------SPL7      <------MYB46(1)                        <---------At4g35610
---MYB83  <---------ANAC58          <------MYB83 --------->ANAC58          --------->At4g35610
---MYB46(1)<----------DOF2          --------->ZAT2                         <---------CCA1(2)
----RAV1(1)<---------DAG2          --------->MYB111(2)         <-----------RAV1(1)
-----AtMYB61  <---------LBD16      --------->ALFIN1            <---------MYB46(3)
---------MYB46(3) --------->SPL7   <---------DEAR3(1)       <-----------RAV1(1)
-----MYB46(3)--------->MYB52(1)    <---------AtMYB61       <---------TOE2(3)<---------ARR11(3)
->ALFIN1  <---------ANAC58 <------ZmHOX2a(1)     --------->ANAC58      <-----------HVH21          --
 
ggtgggtttagtggctttacggacggcggaggaacagggaggtggccgaggcaagagacgttgatgttgttggaggtcagatctcgtcttgatcacaagt  3077200
                                                                  <-----------GT1
                                                               <---------AHL20(2)                ---
                     ------>ZmHOX2a(1)                         <---------ICU4                    <--
                 --------->ARR14(2)                      --------->TOE1(3)                       <--
            ---------->DOF2                              --------->TOE2(3)                   <------
          --------->YAB1<---------LBD16                 --------->ZAT6   <---------DAG2--------->ARR14(2)
         <---------ATHB12                             <-----------GT1    <----------DOF2    <-------
-------->DOF2 --------->DAG2           --------->HSFB2a(2)     --------->AHL20(2)      <---------ARR14(2)
 
tcaaagaagctaatcaaaagggtcctctctgggatgaagtttctaggtctcattttttaaccctaattttttccagctttattttcccaaaatccccttt  3077300
                              ----------->GT1
                             --------->DAG2
                    --------->LBD16
   <----------DOF2 <---------ANAC46<---------TOE2(3)
 ---------->ID1    <---------HSFB2a(2)
------------------>WRI1     ---------->DOF2
-------ANAC58      --------->HSFB2a(2)          --------->ARR11(3)
-------ANAC58     <---------LBD16  <---------TOE1(3)
----DOF2     <---------MYB52(1)    <---------YAB1         ----------->GT1                   --------
--DAG2    ---------->ID1  <------ZmHOX2a(1)  --------->YAB1    ---------->DOF2         <---------YAB1
 
ccttgtcttttttgcccttattccggagaggaaaagttaagataaaaatcagaacttggaagagaaaaaagacaatcgattatgggttttatttttgatt  3077400
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AGI:  At3g10000.1   
Description:  EDA31 (embryo sac development arrest 31); transcription factor. similar to PTL (PETAL LOSS), transcription factor [Arabidopsis thaliana] (TAIR:AT5G03680.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15958.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN71904.1); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005)
Range:  from: 3076879    to: 3078912    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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